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Oryza sativa
cluster # 10968 cluster # 10968       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10968#0 length = 2158 sequences # 5  
consensus_10968#1 length = 705 sequences # 2  
consensus_10968#2 length = 224 sequences # 1  

consensusID : consensus_10968#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2158
fasta sequence
                              [TCCGTCTCGCTTCGGTTCCTTCCTCGAGTCGAAACCTCGCGAAG-CGCCGCCGCCGCCGCCGACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGCGCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGGAAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAAGTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGTAACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTG-TTTGATTAAGTTAGAGAATGTGGGTGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAACTGGATCTATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATTCTTCCTTGCTCCACAAGAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGATTCTCTGCAAGAAACACTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGACTGAGATAAATGATTCTCTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTACATCTGAGCCAGAGACTTCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGCAGAGAATGTCAATGACAATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAATGTTCTTGTTGAGGCATGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGCTGCACCTGCACCTGCTCCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGCATCAGTTGTTAAGGTTACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCCCAAACCCAAACCAAAGCCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTCACCTGTGAAACCTACTAATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGTTGAGCAAGGGTATTCTGTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGTTGAGGAAAAGTTCAGGAAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCGTCAGCCCGATGGATTCTGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGCAGCAATTGAGGCCTCTCCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACGAACTACAACTCGAGTTGTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCAAGACAACAGAGGTGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTNTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGTTGGGAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGTATTTATGGCACGCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTATGAAAAAAAAAAAAAAAAA]

[+] EMBL AK101352             [TCCGTCTCGCTTCGGTTCCTTCCTCGAGTCGAAACCTCGCGAAGCCGCCGCCGCCGCCGCCGACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGCGCTAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGGAAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAAGTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGTAACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTG TTTGATTAAGTTAGAGAATGTGGATGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAACTGGATCTATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATTCTTCCTTGCTCCACAAGAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGATTCTCTGCAAGAAACACTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGACTGAGATAAATGATTCTCTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTACATCTGAGCCAGAGACTTCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGCAGAGAATGTCAATGACAATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAATGTTCTTGTTGAGGCATGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGCTGCACCTGCACCTGCTCCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGCATCAGTTGTTAAGGTTACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCCCAAACCCAAACCAAAGCCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTCACCTGTGAAACCTACTAATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGTTGAGCAAGGGTATTCTGTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGTTGAGGAAAAGTTCAGGAAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCGTCAGCCCGATGGATTCTGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGCAGCAATTGAGGCCTCTCCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACGAACTACAACTCGAGTTGTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCAAGACAACAGAGGTGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGTTGGGAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGTATTTATGGCACGCAGATGGATGAAGGATCTGTTGTGTGCT                           ]
[+] EMBL C27331               [                TCCTTCCTCGAGTCGAAACCTCGCGAAG CGCCGCCGCCGCCGCCGACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGCGCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGGAAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTANGTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGTANCCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTGTTTTGATTAAGTTAGAGAATGTGGGat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL OSC19251             [                 CCTTCCTCGAGTCGAAACCTCGCGAAG CGCCGCCGCCGCCGCCGACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGCGCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGGAAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAAGTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGTAACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTG TTTGATTAAGTTAGAGAATGTGGGTGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAACTGGGNCTATTGGGCAC ATGG AC ATGTGGa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU166860             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTNTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAAATTTGGAAAGGTTGGGAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGTATTTATGGCACGCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTATGAAAAAA           ]
[+] EMBL AU222508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TATCATCAGAATGGGAATGGCTATNGTCAGGACCGCATNTTCCCCAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACNCCGGTTCAAGNGTAGGCGTTTNTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCNCCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGTTGGGAGCTTACTGCAAGGTTNGTGACTTCATGTCGAGACATGCTATCTAATATATGCNTTAGTATTTATGGCNCNCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTAAAAAAAAAAAAAAAAAAAA]


>consensus_10968#0 TCCGTCTCGCTTCGGTTCCTTCCTCGAGTCGAAACCTCGCGAAGCGCCGCCGCCGCCGCC GACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGC GCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGG AAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAA GTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGT AACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTGTTTGAT TAAGTTAGAGAATGTGGGTGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAAC TGGATCTATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATTCTTCCTTGC TCCACAAGAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGATTCTCTGCA AGAAACACTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGACTGAGATAAA TGATTCTCTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTACATCTGAGCC AGAGACTTCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGCAGAGAATGT CAATGACAATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAATGTTCTTGT TGAGGCATGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGCTGCACCTGC ACCTGCTCCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGCATCAGTTGT TAAGGTTACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCCCAAACCCAA ACCAAAGCCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTCACCTGTGAA ACCTACTAATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGTTGAGCAAGG GTATTCTGTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGTTGAGGAAAA GTTCAGGAAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCGTCAGCCCGA TGGATTCTGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGCAGCAATTGA GGCCTCTCCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACGAACTACAAC TCGAGTTGTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTT CCAGCAAGACAACAGAGGTGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGG TTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCA GAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAA CGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCA GAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTA TCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGG GAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCG CTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTNTTGAATATCCAAAAAA TCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCT GCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCA TGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGTTGGGAGCTTACT GCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGTATTTATGGC ACGCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTATGAAAAAAAAAAAAAAAAA



consensusID : consensus_10968#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 705
fasta sequence
                              [TGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCCAAGACAACAGAGGTGGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAAAACCTCGTG]

[-] EMBL CF305764             [TGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCCAAGACAACAGAGGTGGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATATCCAAAAAATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGATGTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAAAACCTCGTG]
[+] EMBL AU063040             [                                                                                                       AAGCAGGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGG                                                                                                                                                                                                                                                                                                                                                          ]


>consensus_10968#1 TGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTTCCAGCCAAGACA ACAGAGGTGGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCAGGTTTCGTGAAC AATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAATCAGAACGAGTAC TCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGTAACGGTGGTGGT TACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCATCAGAATGGGAAC AGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTACTATCAGAACGGC AATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAATGGGAATGGCTAT CGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCTCGCTTCAATGGA CCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATATCCAAAAAATCCTTTTGTC AATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGGCTGCGACAAAGT TCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGTTGGCATGTTCTGGAT GTACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAAAACCTCGTG



consensusID : consensus_10968#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 224
fasta sequence
                              [TGATATCCAAAATCCTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTGCATTTATTCGGATGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTGCTGACTAGTGCAGCTGAGACTGGTGATGACCACGCAAGCGCAATTTGCAAAGGTTGGGAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATG]

[-] EMBL AA750374             [TGATATCCAAAATCCTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTGCATTTATTCGGATGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTGCTGACTAGTGCAGCTGAGACTGGTGATGACCACGCAAGCGCAATTTGCAAAGGTTGGGAGCTTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATG]


>consensus_10968#2 TGATATCCAAAATCCTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTGCATT TATTCGGATGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTGCTGACT AGTGCAGCTGAGACTGGTGATGACCACGCAAGCGCAATTTGCAAAGGTTGGGAGCTTACT GCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10968#0      TCCGTCTCGCTTCGGTTCCTTCCTCGAGTCGAAACCTCGCGAAGCGCCGCCGCCGCCGCC 60
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GACTCTCGCTAGGGCTAGGGTTTTCCTCCCGCCGCCGGGAGCCCCTCCCCCTGCAACCGC 120
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GCAAGGGATGGCTATGCAAGTTGGGGAATCAGTTGCTCCTTTAAGTCCACAAATGATTGG 180
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AAATGCGTTTGTTCAACAATACTACAATGTTCTCCATAGTTCACCGGGTCAAGTTTGTAA 240
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GTTCTATCATGATTCAAGCACCCTTGGTCGACCAGATTCTAATGGAACCATGACATCTGT 300
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AACCACATTGACTGCTATCAACGATGAATTTCTCTCTACGGACTTCAGTAGCTGTTTGAT 360
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TAAGTTAGAGAATGTGGGTGCACAGTTATCCCTCAATGGTGGTGTGCACATTTTGGTAAC 420
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TGGATCTATTGGACACAATGGCACTATGAGGCATAGATTTAGCCAGTCATTCTTCCTTGC 480
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TCCACAAGAAAGCGGAGGCTATTTTGTTCTGAATGATATGCTAAGATATGATTCTCTGCA 540
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AGAAACACTGTTGACTGAGACAAATGATTCTCCACAAGAAAGACTGTTGACTGAGATAAA 600
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TGATTCTCTGCCTAACCATGTTGATGATAACACTCACAGTGTCACATTTACATCTGAGCC 660
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AGAGACTTCAGGCAATGTCAATGAGACTGCAGACTTGGAGCTTCCATCTGCAGAGAATGT 720
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      CAATGACAATGTTGAGAATCTGCCTGCCAATGACAGTTCTCCCGAAGAAAATGTTCTTGT 780
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TGAGGCATGCACGGAAGTGGTTAGTTCGTGTGCAGAGAACATTCCTGCAGCTGCACCTGC 840
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      ACCTGCTCCTCGTGCCTCGACTCAGAAGGATGTTACTAAACAGTCATATGCATCAGTTGT 900
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TAAGGTTACAAAGGAGGGCACACCAACTCCACCTGTTGCAAAGCCCAAGCCCAAACCCAA 960
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      ACCAAAGCCAACTGCAAAAGTGACTGACAATGTGGAGAAAGCTGTGTCCTCACCTGTGAA 1020
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      ACCTACTAATGCAGCTGATACCACATCTCCAAATGACAAAAATGTTCTTGTTGAGCAAGG 1080
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GTATTCTGTTTATGTAAAGCACTTACCTTATGAATGTACCACGAAAGATGTTGAGGAAAA 1140
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GTTCAGGAAATTTGGTGCTATCAGGCCTGGTGGTATTCAAGTTCGACACCGTCAGCCCGA 1200
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TGGATTCTGCTTTGGCTTTGTTGAATTTGAGTCTCGGCAATCCATGCTAGCAGCAATTGA 1260
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GGCCTCTCCAGTTTCTATTGGCTCAAAAGCATCCATTGTTGAGGAGAAACGAACTACAAC 1320
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TCGAGTTGTTAATGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTT 1380
consensus_10968#1      ------------TGGTGTCACCCATATTGAAAACAATGGCAATGCTCGGGGTGGTCGGTT 48
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      CCAGC-AAGACAACAGAGGTGG-TGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCA 1438
consensus_10968#1      CCAGCCAAGACAACAGAGGTGGGTGGATACCGTGGGGACAACTTCAGGGGACGAGAAGCA 108
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAAT 1498
consensus_10968#1      GGTTTCGTGAACAATGGTAACTACCGTGATGGTGATAACATGAGGAACGGATTCAGAAAT 168
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      CAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGT 1558
consensus_10968#1      CAGAACGAGTACTCAGGGCGTGGTCGTGGGCCTCAGGGGAATGGTTACCATCAGAATGGT 228
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCAT 1618
consensus_10968#1      AACGGTGGTGGTTACCATCAGAATGGAAATGGATACCATCAGAACGGTGATGGATACCAT 288
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      CAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTAC 1678
consensus_10968#1      CAGAATGGGAACAGATACAATCAGAACGGGAACAGATACCATCAGAACGGAGATGAGTAC 348
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      TATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAAT 1738
consensus_10968#1      TATCAGAACGGCAATGGCAATGGACATCGGCAGAATGGGTCTGGATACTATCATCAGAAT 408
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      GGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCT 1798
consensus_10968#1      GGGAATGGCTATCGTCAGGACCGCATCTTCCACAATGGGAATGGAAATGGGCGGCCTGCT 468
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      CGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTNTTGAATATCCAAAA 1858
consensus_10968#1      CGCTTCAATGGACCCAGGCAAACACCGGTTCAAGCGTAGGCGTTTCTTGAATATCCAAAA 528
consensus_10968#2      ------------------------------------------------TGATATCCAAAA 12
                                                                         **********

consensus_10968#0      AATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGG 1918
consensus_10968#1      AATCCTTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTTTGCACCCCATTCGG 588
consensus_10968#2      ---TCCTTTGTCAATCCTAGGATCGCCTTATTTATCTGTGTTCTTT-GCATTT-ATTCGG 67
                           * **************************************** ***    ******

consensus_10968#0      CTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGT-TG 1977
consensus_10968#1      CTGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTTTGCTGACTAGT-TG 647
consensus_10968#2      ATGCGACAAAGTTCAGTCCCAGCCCTTCGTTTTGCCTCGATGCTTT-GCTGACTAGTGCA 126
                        ********************************************* **********   

consensus_10968#0      GCATGTTCTGGATGT-ACTTGGTGAGACCAGGAAGTGTAATTTTGGAAAGGT-TGGGAGC 2035
consensus_10968#1      GCATGTTCTGGATGT-ACTTGGTGAGACCAGGAAGTGTAATTTTGGAAA-------AAAC 699
consensus_10968#2      GCTGAGACTGGTGATGACCACGCAAGCGCAATTTGCAAAGGTTGGGAGCTTACTGCAAGG 186
                       **     ****   * **   *  **  **    *   *  ** ***          *  

consensus_10968#0      TTACTGCAAGGTTCGTGACTTCATGTCGAGACATGCTATCTAATATATGCATTAGTATTT 2095
consensus_10968#1      CTCGTG------------------------------------------------------ 705
consensus_10968#2      TTCGTGACTTCATGTCGAGACATGCTATCTAATATATG---------------------- 224
                        *  **                                                      

consensus_10968#0      ATGGCACGCAGATGGATGAAGGATCTGTTGTGTGCTTTTCCTTATGAAAAAAAAAAAAAA 2155
consensus_10968#1      ------------------------------------------------------------
consensus_10968#2      ------------------------------------------------------------
                                                                                   

consensus_10968#0      AAA 2158
consensus_10968#1      ---
consensus_10968#2      ---
                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)