These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10992#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3270 fasta sequence [GCTGCAGAGAGTGCAGAATTCGACGGTTAATGTGATGCACGTCATGGAGTATCTGGCTGCCAATGTCGACCTCGCCAAGGACCTCGTCATGAGGTGCAGCGCCGTTGCGCGGGAGCTCAAGAACGATGACCTCCTGGGCATGACCGAGGACCTTGACAGTGTCATAAAGAACATTGGGCATGAGCTCAGCAGGATACCTGCTTCAGCATTTGGTAGCAGCAGGTTTCCAGATGGCAGAGCAGATGCAAACCTTCAGATTGCAGGACATCGGCCGCGTTATTGTGACCATAATTCCTGCGATGGTTACTCTGAGGCCGATATGTCGATAATCCCGGCAAACAGCAGGCCCCGGAGAAGAACATTGCACAATAGTGACATGCCAAGGCTGGTGGACTTCCTGCAGGGAATGTACCATGAATCACATGATATCGGTGCACATTCATTCAATTCGCTCCCTGAAGTCGCAGAATATGTCGAGCCATTATATGATTCGTTCTTCTGTCCATTGACAAACAAGGTCATGGTTGATCCAGTGACAACAGGAAGTGGTGTGACATATGATAGGAAAGCCATTGAGGAGTACTTTGAGAAATTTGCTGATGGTTCTGAACCTGTGGTATGCCCTGTGACAAAGATGTCGATGCAAAGCAAGGCACTGAGGAGCAATGTTCCACTGAAGAGCACAATTGCAGAATGGATTATGAGAAATGAAGCCACAAGGGTCAGGATTGCACGAACCGCGCTCTCCATGGCTTCCACAGAGGCAATGTTGCTTGAGGCCATACAAGAGCTGAAGCTGCTGGCCAAGATAAGGAGAAAGAACAGGGAACAGATGCACAAAATCGGGATAACTAAGTTCCTCCCTCGTTTGTTGGAGCACAAGGATGGTCTGATACGCTGTGATTCGCTGGATCTCCTTTGCTTATTGGCTGAGGATGAAACAGGAAAGGAAGTCATAGCAAATACCAGAGCCATTACAAGAACAATAAAGCTGCTTTCTAGTAATAGTCCTGATGAAAGACATGCAGCCATCTCTTTCTTGCTAGAGCTTTCGAAATCGGAGCTATTGTTGGAAAACATCGGATCAACTTCTGGAAGCATATTGATGCTTACCACAATGAAATTCAATGATTCAGATGATCCGGTTGCTGCAGAGAAGGCTGGGGAGGTTCTCAAGAACCTGGAGAACTGCCCAAAGAACATTAAGTACATGGCTGAAAGTGGTTACCTGGATCCTCTCCAAAGACATTTAGTGGAAGGGTCTGAAGATGTTCAAATGGAGATGGTGAGCTACCTCGGCGAGCTGGTCCAGAAGCAGGAAATGACCATCAACATTGCTGGGAGTGCTTCAGAGATCCCCATCAAGATGGTGCATAGCGGCAACACTGTGATCCGCAAGGCGGCCCTTGATGTCCTTGTCCAGATCTCCTCAGATGGCCCCAACAGCAAGACTCTCGTCGACGCCGGTGCTGTTCCGGTCATGGTGGAGGAGCTCTTCATCCGCAAGATCGACGACGAGCCTATGGGGTCCAAGACAGAGGCTGCTGCAGTGCTCGCCAACATCGTCGAGTCCGGTCTCGATCCCGACACCATCGTCGTCAACAAGGAAGGCCATGTCATCACTTCAAAGTATTCGGTGTACAACTTCACCCACATGCTCAAGTGCTCCATGCCTGATGATCTCAACCTGAGCATCATACGTGTGCTGCTCGCGCTCACTGCGCTCCCAAAGCCGCTCATGACGGT-GGTGTCCGTCATGAAGGAGCAGGACAGCAGCCTGACCGTGATCGAGTTCATGGGCTCGAAGACGGAGGCGTTAGGCATCAGCGCGACGAGGCTGCTCATTGCATTGTCTCCTCAGATGGGGCACACCATTGCCGAGAAGCTCTGCAAGGCGCCAGGGCAGCCGGGAAGGCTGGTGAAGAGCATCGGCCAGCCCGGGCGTGTCACCGAACGGCACGCCGTGGCGGCGACGCTGCTGGCGAGGCTGCCGTACCAGAACATCACGCTCAACCTGGCGCTGCTGGAGCAGGGAGCAGTGCCGACGTTGCTGGCCAAGATAGAGGAGATGCAGCGCGGCGAAATGCGAGTGAGCCGCCATGCCAAGACGTACATGGAGGGCCTCGTCGGCGCGCTCGTCCGGATGACGATGACGCTGTACGACCCCGACGTGCTCCTGGCGGCCATGGATCACAACTTCACGGCGGTGCTCACCGATCTGCTCGTGCGGTCAGCGGGCAGCGACGAGGTGCAGCGGCTCGCGGCGGTCGGCCTCGAGAACCTTAGCCACCAGTCGGTGAACCTCTCGCAGCCGCCATCAGAGGAGCAACGGCGCCCCAAGAAGAAGAACATCCTCCGGCGCCTGCGCGACGCGCACACCGGGCGGGTGCACGACAACAACCGGAAGCCGCCACCGCCGCCGGCGCAGGGACGCCTCTGCCCGGTGCACCGCGGCGTGTGCTCCCCGGCCACCACGTTCTGCCTGGCGGAGGCCGGCGCGGTGGAGGCCCTCGTCGGCGTCCTCGAGAGCAACGAGAACGGCCGCGTGGTCGACGCCGTGCTGGGCGCGCTCTGCACGCTCATGGACGACGCCGTCGACGTGGAACGCGGCGTGGCCGTGCTCGCCGAGCACGACGCCGCGCGGCACGTCCTGCGCGCGCTGCGGCAGCACCGTGACGTCGGCGGCGACACCGCCGGCGCGGTGTCGCGGCGCTGCTTCTGGGCCGTGGAGAGGTTCCTGGCGCACGGCGGCGAGCGGTGCGTGCGCGACGTGACGGCGGACCGCGCGCTGCCGAGCGCGCTGGTGAGCGCGTTCCACAAGGGCGACGCCGCGACGAAGCAGGTCGCCGAGAGCGTGCTCCGGAGCCTGCACCGGATGCCGGACTACTCCGCCACCTACGTCTCCGTCGAGTTGTAGCATATCATCTTCATCTTCATCTCCATAGTTTCTTGCCATGTTCTTGGCTGTAACTACTAGAACTACATCATATGGGCTTGGTGTATTTGGTTTGGTCTTGTAACTATACTGAACAAGTTCACAGGGAAAAGAGAAGAAGAAAAGAAAGAACACTGCAGATGCAATGTAGCTAGTACATGTTGTTATAGCAGGGGAAGATTATATGCTCTTTGACATAGGTAGTAGTTTCTTTTTCTT-CATGTATGTATAATTTGTTTCAGAAATTGTCTTTTGTGGATTGGTGTTTTTGCTTGGAGAAAGAAATATTTGCATATAGATGCAGCAAAAATGTAGTGTTCAGACCAAAAAAAAGA] [+] EMBL AK110058 [GCTGCAGAGAGTGCAGAATTCGACGGTTAATGTGATGCACGTCATGGAGTATCTGGCTGCCAATGTCGACCTCGCCAAGGACCTCGTCATGAGGTGCAGCGCCGTTGCGCGGGAGCTCAAGAACGATGACCTCCTGGGCATGACCGAGGACCTTGACAGTGTCATAAAGAACATTGGGCATGAGCTCAGCAGGATACCTGCTTCAGCATTTGGTAGCAGCAGGTTTCCAGATGGCAGAGCAGATGCAAACCTTCAGATTGCAGGACATCGGCCGCGTTATTGTGACCATAATTCCTGCGATGGTTACTCTGAGGCCGATATGTCGATAATCCCGGCAAACAGCAGGCCCCGGAGAAGAACATTGCACAATAGTGACATGCCAAGGCTGGTGGACTTCCTGCAGGGAATGTACCATGAATCACATGATATCGGTGCACATTCATTCAATTCGCTCCCTGAAGTCGCAGAATATGTCGAGCCATTATATGATTCGTTCTTCTGTCCATTGACAAACAAGGTCATGGTTGATCCAGTGACAACAGGAAGTGGTGTGACATATGATAGGAAAGCCATTGAGGAGTACTTTGAGAAATTTGCTGATGGTTCTGAACCTGTGGTATGCCCTGTGACAAAGATGTCGATGCAAAGCAAGGCACTGAGGAGCAATGTTCCACTGAAGAGCACAATTGCAGAATGGATTATGAGAAATGAAGCCACAAGGGTCAGGATTGCACGAACCGCGCTCTCCATGGCTTCCACAGAGGCAATGTTGCTTGAGGCCATACAAGAGCTGAAGCTGCTGGCCAAGATAAGGAGAAAGAACAGGGAACAGATGCACAAAATCGGGATAACTAAGTTCCTCCCTCGTTTGTTGGAGCACAAGGATGGTCTGATACGCTGTGATTCGCTGGATCTCCTTTGCTTATTGGCTGAGGATGAAACAGGAAAGGAAGTCATAGCAAATACCAGAGCCATTACAAGAACAATAAAGCTGCTTTCTAGTAATAGTCCTGATGAAAGACATGCAGCCATCTCTTTCTTGCTAGAGCTTTCGAAATCGGAGCTATTGTTGGAAAACATCGGATCAACTTCTGGAAGCATATTGATGCTTACCACAATGAAATTCAATGATTCAGATGATCCGGTTGCTGCAGAGAAGGCTGGGGAGGTTCTCAAGAACCTGGAGAACTGCCCAAAGAACATTAAGTACATGGCTGAAAGTGGTTACCTGGATCCTCTCCAAAGACATTTAGTGGAAGGGTCTGAAGATGTTCAAATGGAGATGGTGAGCTACCTCGGCGAGCTGGTCCAGAAGCAGGAAATGACCATCAACATTGCTGGGAGTGCTTCAGAGATCCCCATCAAGATGGTGCATAGCGGCAACACTGTGATCCGCAAGGCGGCCCTTGATGTCCTTGTCCAGATCTCCTCAGATGGCCCCAACAGCAAGACTCTCGTCGACGCCGGTGCTGTTCCGGTCATGGTGGAGGAGCTCTTCATCCGCAAGATCGACGACGAGCCTATGGGGTCCAAGACAGAGGCTGCTGCAGTGCTCGCCAACATCGTCGAGTCCGGTCTCGATCCCGACACCATCGTCGTCAACAAGGAAGGCCATGTCATCACTTCAAAGTATTCGGTGTACAACTTCACCCACATGCTCAAGTGCTCCATGCCTGATGATCTCAACCTGAGCATCATACGTGTGCTGCTCGCGCTCACTGCGCTCCCAAAGCCGCTCATGACGGT GGTGTCCGTCATGAAGGAGCAGGACAGCAGCCTGACCGTGATCGAGTTCATGGGCTCGAAGACGGAGGCGTTAGGCATCAGCGCGACGAGGCTGCTCATTGCATTGTCTCCTCAGATGGGGCACACCATTGCCGAGAAGCTCTGCAAGGCGCCAGGGCAGCCGGGAAGGCTGGTGAAGAGCATCGGCCAGCCCGGGCGTGTCACCGAACGGCACGCCGTGGCGGCGACGCTGCTGGCGAGGCTGCCGTACCAGAACATCACGCTCAACCTGGCGCTGCTGGAGCAGGGAGCAGTGCCGACGTTGCTGGCCAAGATAGAGGAGATGCAGCGCGGCGAAATGCGAGTGAGCCGCCATGCCAAGACGTACATGGAGGGCCTCGTCGGCGCGCTCGTCCGGATGACGATGACGCTGTACGACCCCGACGTGCTCCTGGCGGCCATGGATCACAACTTCACGGCGGTGCTCACCGATCTGCTCGTGCGGTCAGCGGGCAGCGACGAGGTGCAGCGGCTCGCGGCGGTCGGCCTCGAGAACCTTAGCCACCAGTCGGTGAACCTCTCGCAGCCGCCATCAGAGGAGCAACGGCGCCCCAAGAAGAAGAACATCCTCCGGCGCCTGCGCGACGCGCACACCGGGCGGGTGCACGACAACAACCGGAAGCCGCCACCGCCGCCGGCGCAGGGACGCCTCTGCCCGGTGCACCGCGGCGTGTGCTCCCCGGCCACCACGTTCTGCCTGGCGGAGGCCGGCGCGGTGGAGGCCCTCGTCGGCGTCCTCGAGAGCAACGAGAACGGCCGCGTGGTCGACGCCGTGCTGGGCGCGCTCTGCACGCTCATGGACGACGCCGTCGACGCGGAACGCGGCGTGGCCGTGCTCGCCGAGCACGACGCCGCGCGGCACGTCCTGCGCGCGCTGCGGCAGCACCGTGACGTCGGCGGCGACACCGCCGGCGCGGTGTCGCGGCGCTGCTTCTGGGCCGTGGAGAGGTTCCTGGCGCACGGCGGCGAGCGGTGCGTGCGCGACGTGACGGCGGACCGCGCGCTGCCGAGCGCGCTGGTGAGCGCGTTCCACAAGGGCGACGCCGCGACGAAGCAGGTCGCCGAGAGCGTGCTCCGGAGCCTGCACCGGATGCCGGACTACTCCGCCACCTACGTCTCCGTCGAGTTGTAGCATATCATCTTCATCTTCATCTCCATAGTTTCTTGCCATGTTCTTGGCTGTAACTACTAGAACTACATCATACGGGCTTGGTGTATTTGGTTTGGTCTTGTAACTATACTGAACAAGTTCACAGGGAAAAGAGAAGAAGAAAAGAAAGAACACTGCAGATGCAATGTAGCTAGTACATGTTGTTATAGCAGGGGAAGATTATATGCTCTTTGACATAGGTAGTAGTTTCTTTTTCTT CATGTATGTATAATTTGTTTCAGAAATTGTCTTTTGTGGATTGGTGTTTTTGCTTGGAGAAAGAAATATTTGCATATAGATGCAGCAAAAATGTAGTG ] [+] EMBL CB656843 [ TCCACCGAGGCAATGTTGCTTGAGGCCATACAAGAGCTGAAGCTGCTGGCCAAGATAAGGAGAAAGAACAGGGAACAGATGCACAAAATCGGGATAACTAAGTTCCTCCCTCGTTTGTTGGAGCACAAGGATGGTCTGATACGCTGTGATTCGCTGGATCTCCTTTGCTTATTGGCTGAGGATGAAACAGGAAAGGAAGTCATAGCAAATACCAGAGCCATTACAAGAACAATAAAGCTGCTTTCTAGTAATAGTCCTGATGAAAGACATGCAGCCATCTCTTTCTTGCTAGAGCTTTCGAAATCGGAGCTATTGTTGGAAAACATCGGATCAACTTCTGGAAGCATATTGATGCTTACCACAATGAAATTCAATGATTCAGATGATCCGGTTGCTGCAGAGAAGGCTGGGGAGGTTCTCAAGAACCTGGAGAACTGCCCAAAGAACATTAAGTACATGGCTGAAAGTGGTTACCTGGATCCTCTCCAAAGACATTTAGTGGAAGGGTCTGAAGATGTTCAAATGGAGATGGTGAGCTACCTCGGCGAGCTGGTCCAGAAGCAGGAAATGACCATCAACATTGCTGGGAGTGCTTCAGAGATCCTCATCAAGATGGTGCATAGCGGCAACACTGTGATCCGCAAGGCGGCCCTTGATGTCCTTGTCCAGATCTCCTCAGATGGCCCCAACAGCAAGACTCTCGTCGACGCCGGTGCTGTTCCGGTCATGGTGGAGGAGCTCTTCATCCGCAAGATCGACGACGAGCCTATGGGGTCCAAGACAGAG ] [+] EMBL CB638681 [ ATGGTGCATAGCGGCAACACTGTGATCCGCAAGGCGGCCCTTGATGTCCTTGTCCAGATCTCCTCAGATGGCCCCAACAGCAAGACTCTCGTCGACGCCGGTGCTGTTCCGGTCATGGTGGAGGAGCTCTTCATCCGCAAGATCGACGACGAGCCTATGGGGTCCAAGACAGAGGCTGCTGCAGTGCTCGCCAACATCGTCGAGTCCGGTCTCGATCCCGACACCATCGTCGTCAACAAGGAAGGCCATGTCATCACTTCAAAGTATTCGGTGTACAACTTCACCCACATGCTCAAGTGCTCCATGCCTGATGATCTCAACCTGAGCATCATACGTGTGCTGCTCGCGCTCACTGCGCTCCCAAAGCCGCTCATGACGGTGGGTGTCCGTCATGAAAGAGCAGGA ] [+] EMBL CB638683 [ CAGCAAGACTCTCGTCGACGCCGGTGCTGTTCCGGTCATGGTGGAAGAGCTCTTTATCCGCAAGATCGACGACGAGCCTATGGGGTCCAAGACAGAGGCTGCTGCGATGCTCGCCAACATCCTCGAGTCCAGTCTCGATCCCGACACCATCGTCGTCAACAAGGAAAGCCATGTCATCACTTCAAAGTATTCGGTGTACAACTTCACCCACATGCTCGAGTGCTCCATGCCTGATGATCTCAACCTGAGCATCATACGTGTGCTGCTCG ] [+] EMBL CB654780 [ AGTGCTCGCCAACATCGTCGAGTCCGGTCTCGATCCCGACACCATCGTCGTCAACAAGGAAGGCCATGTCATCACTTCAAAGTATTCGGTGTACAACTTCACCCACATGCTCAAGTGCTCCATGCCTGATGATCTCAACCTGAGCATCATACGTGTGCTGCTCGCGCTCACTGCGCTCCCAAAGCCGCTCATGACGGT GGTGTCCGTCATGAAGGAGCAGGACAGCAGCCTGACCGTGATCGAGTTCATGGGCTCGAAGACGGAGGCGTTAGGCATCAGCGCGACGAGGCTGCTCATTGCATTGTCTCCTCAGATGGGGCACACCATTGCCGAGAAGCTCTGCAAGGCGCCAGGGCAGCCGGGAAGGCTGGTGAAGAGCATCGGCCAGCCCGGGCGTGTCACCGAACGGCACGCCGTGGCGGCGACGCTGCTGGCGAGGCTGCCGTACCAGAACATCACGCTCAACCTGGCGCTGCTGGAGCAGGGAGCAGTGCCGACGTTGCTGGCCAAGATAGAGGAGATGCAGCGCGGCGAAATGCGAGTGAGCCGCCATGCCAAGACGTACATGGAGGGCCTCGTCGGCGCGCTCGTCCGGATGACGATGACGCTGTACGACCCCGACGTGCTCCTGGCGGCCATGGATCACAACTTCACGGCGGTGCTCACCGATCTGCTCGTGCGGTCAGCGGGCAGCGACGAGGTGCAGCGGCTCGCGGCGGTCGGCCTCGAGAACCTTAGCCACCAGTCGGTGAACCTCTCGCAGCCGCCATCAGAGGAGCAA ] [-] EMBL CB654781 [ ATCCTCCGGCGCCTGCGCGACGCGCACACCGGGCGGGTGCACGACAACAACCGGAAGCCGCCACCGCCGCCGGCGCAGGGACGCCTCTGCCCGGTGCACCGCGGCGTGTGCTCCCCGGCCACCACGTTCTGCCTGGCGGAGGCCGGCGCGGTGGAGGCCCTCGTCGGCGTCCTCGAGAGCAACGAGAACGGCCGCGTGGTCGACGCCGTGCTGGGCGCGCTCTGCACGCTCATGGACGACGCCGTCGACGTGGAACGCGGCGTGGCCGTGCTCGCCGAGCACGACGCCGCGCGGCACGTCCTGCGCGCGCTGCGGCAGCACCGTGACGTCGGCGGCGACACCGCCGGCGCGGTGTCGCGGCGCTGCTTCTGGGCCGTGGAGAGGTTCCTGGCGCACGGCGGCGAGCGGTGCGTGCGCGACGTGACGGCGGACCGCGCGCTGCCGAGCGCGCTGGTGAGCGCGTTCCACAAGGGCGACGCCGCGACGAAGCAGGTCGCCGAGAGCGTGCTCCGGAGCCTGCACCGGATGCCGGACTACTCCGCCACCTACGTCTCCGTCGAGTTGTAGCATATCATCTTCATCTTCATCTCCATAGTTTCTTGCCATGTTCTTGGCTGTAACTACTAGAACTACATCATATGGGCTTGGTGTATTTGGTTTGGTCTTGTAACTATACTGAACAAGTTCACAGGGAAAAGAGAAGAAGAAAAGAAAGAACACTGCAGATGCAGTGTAGCTAGTACATGTTGTTATAGCAGGGGAAGATTAAATGGTCTTT ] [-] EMBL CB656844 [ GGCGCGGTGGAGGCCCTCGTCGGCGTCCTCGAGAGCAACGAGAACGGCCGCGTGGTCGACGCCGTGCTGGGCGCGCTCTGCACGCTCATGGACGACGCCGTCGACGTGGAACGCGGCGTGGCCGTGCTCGCCGAGCACGACGCCGCGCGGCACGTCCTGCGCGCGCTGCGGCAGCACCGTGACGTCGGCGGCGACACCGCCGGCGCGGTGTCGCGGCGCTGCTTCTGGGCCGTGGAGAGGTTCCTGGCGCACGGCGGCGAGCGGTGCGTGCGCGACGTGACGGCGGACCGCGCGCTGCCGAGCGCGCTGGTGAGCGCGTTCCACAAGGGCGACGCCGCGACGAAGCAGGTCGCCGAGAGCGTGCTCCGGAGCCTGCACCGGATGCCGGACTACTCCGCCACCTACGTCTCCGTCGAGTTGTAGCATATCATCTTCATCTTCATCTCCATAGTTTCTTGCCATGTTCTTGGCTGTAACTACTAGAACTACATCATATGGGCTTGGTGTATTTGGTTTGGTCTTGTAACTATACTGAACAAGTTCACAGGGAAAAGAGAAGAAGAAAAGAAAGAACACTGCAGATGCAATGTAGCTAGTACATGTTGTTATAGCAGGGGAAGATTATATGCTCTTTGACATAGGTAGTAGTTTCTTTTTCTT CATGTATGTATAATTTGTTTCAGAAATTGTCTTTTGTGGATTGGTGTTTTTGCTTGGAGAAAGAAATATTTGCATATAGATGCAGCAAAAATGTAGTGTTCAGACCAAAAAAAAGA] [-] EMBL CB638682 [ CACGGCGGCGAGCGGTGCGTGCGCAACGTGACGGCGGACCGCGCGCTGCCGAGCGCGCTGGTGAGCGCGTTCCACAAGGGCGACGCCGCGACGAAGCAGGTCGCCGAGAGCGTGCTCCGGAGCTTGCACCGGATGCCGGACTACTCCGCCACTTACGTCTCCGTCGAGTTGTAGCATATCATCTTCATCTTCATCTCCATAGTTTCTTGCCATGTTCTTGGCTGTAACTACTAGAACTACATCATATGGGCTTGGTGTATTTGGTTTGGTCTTGTAACTATACTGAACAAGTTCACAGGGAAAAGAGAAGAAGAAAAGAAAGACCACTGCAGATGCAATGTAGCTAGTACATGTTGTTATAGCAGGGGAAGATTATATGCTCTTTGACATAGGTAGTAGTTTCTTTTTCTTCCATGTATGTATAATTTGTTTCAGAAATTGTCTTTTGTGGATTGGTGTTTTTGCTTGGAGAAAGAAATATTTGCATATAGATGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||