cluster # 10993

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Oryza sativa
cluster # 10993 cluster # 10993 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10993#0 length = 1273 sequences # 6

consensus_10993#1 length = 523 sequences # 2

consensusID : consensus_10993#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1273
fasta sequence

                              [ACTTGGTCGCCACGGAAGCGCAGCATCAACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAATGGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCCGGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGTTGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCCCTGGGATCTCCCTGAGAAGGCGTTGTT-CGGGAGGAAAGAGTGGTACTTCTTCACGCCGAGGGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAGCGGGGAGAGGGTAC-TGGAAGGCGACGGGAGCCGACAAGCCGG-TGGCGCCCAAGGGGAGCGCGAGGACGGTGGGGATCAAGAAGGCGCTCGTGTTCTACTCCGGGAAGGCGCCGAGGGGGGTCAAGACGGACTGGATCATGCACGAGTACCGCCTCGCCGACGCCGACCGCGCCCCGGGCGGCAAGAAGGGCTCACAGAAGCTGGACGGGTGGGTGCTGTGCCGGCTGTACAACAAGAAGAACAACTGGGAGAAGGTGAAGCTGGAGCAGCAGGACGTGGCCTCCGTGGCGGCGGCGGCGCCGCGCAACCACCACCATCAGAACG-GCGAGGTCATGGACGCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCACGACTCCGACATCGACAACGCCTCCGCCGGCCTGCGGCACGGTGGCTGCGGCGGCGGCGGCTT-CGGCGACGTGGCGCCGCCGAGGAATGGGTTCGTGACGGTGAAGGAGGACAACGACTGGTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACAAAAAAAAAAAAAAA]

[+] EMBL AK073848             [ACTTGGTCGCCACGGAAGCGCAGCATCAACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAATGGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCCGGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGTTGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCCCTGGGATCTCCCTGAGAAGGCGTTGTT CGGGAGGAAAGAGTGGTACTTCTTCACGCCGAGGGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAGCGGGGAGAGGGTAC TGGAAGGCGACGGGAGCCGACAAGCCGG TGGCGCCCAAGGGGAGCGCGAGGACGGTGGGGATCAAGAAGGCGCTCGTGTTCTACTCCGGGAAGGCGCCGAGGGGGGTCAAGACGGACTGGATCATGCACGAGTACCGCCTCGCCGACGCCGACCGCGCCCCGGGCGGCAAGAAGGGCTCACAGAAGCTGGACGGGTGGGTGCTGTGCCGGCTGTACAACAAGAAGAACAACTGGGAGAAGGTGAAGCTGGAGCAGCAGGACGTGGCCTCCGTGGCGGCGGCGGCGCCGCGCAACCACCACCATCAGAACG GCGAGGTCATGGACGCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCACGACTCCGACATCGACAACGCCTCCGCCGGCCTGCGGCACGGTGGCTGCGGCGGCGGCGGCTT CGGCGACGTGGCGCCGCCGAGGAATGGGTTCGTGACGGTGAAGGAGGACAACGACTGGTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCGGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACAtctcc         ]
[+] EMBL AB028183             [                            ACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAATGGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCCGGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGTTGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCCCTGGGATCTCCCTGAGAAGGCGTTGTT CGGGAGGAAAGAGTGGTACTTCTTCACGCCGAGGGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAGCGGGGAGAGGGTAC TGGAAGGCGACGGGAGCCGACAAGCCGG TGGCGCCCAAGGGGAGCGCGAGGACGGTGGGGATCAAGAAGGCGCTCGTGTTCTACTCCGGGAAGGCGCCGAGGGGGGTCAAGACGGACTGGATCATGCACGAGTACCGCCTCGCCGACGCCGACCGCGCCCCGGGCGGCAAGAAGGGCTCACAGAAGCTGGACGAGTGGGTGCTGTGCCGGCTGTACAACAAGAAGAACAACTGGGAGAAGGTGAAGCTGGAGCAGCAGGACGTGGCCTCCGTGGCGGCGGCGGCGCCGCGCAACCACCACCATCAGAACG GCGAGGTCATGGACGCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCACGACTCCGACATCGACAACGCCTCCGCCGGCCTGCGGCACGGTGGCTGCGGCGGCGGCGGCTT CGGCGACGTGGCGCCGCCGAGGAATGGGTTCGTGACGGTGAAGGAGGACAACGACTGGTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACAAAAAAAAAAAAAAA]
[+] EMBL OSC100121            [                            ACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAATGGCGGCGGCGGTTGGGGGCANCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGNCGGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGTTGCCCGGCAGCCGCTCCCCGTCCCAATCATCGNCGAGGTCGACCTCTACAAGCTCGACCCCTGGGATCTCCCTGAGAAGNCGTTGTTCCGGGAGGAAAGAGTGGTACTTCTTCACGTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU062636             [                                              GCAGCAGCAGCAGCAGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAATGGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCCGGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGTTGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCCCTGGGATCTCCCTGAGAAGGCGTTGTT CGGGAGGAAAGAGTGGTACTTCTTCACGCCGAGGGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAG GGGANGAGGGTACTTNGAAGGCGACGGGAGCCGACAAGCCGGTTNGCG CCAAGGGGAGCTC AAGACGTTGGGata                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU075972             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GAACGNCCGAGGTCATGGACNCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCACGANTCCGACATCGACAACGCCTCCGCCCGCCTGCGGCACGGTGGCTGCGGCGGCGGCGGCTT CGGCGACGTGGCGCCGCCGAGGAATGGGTTCGTGACGGTGAAGGAGGACAACGACTGGTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACAAAAAAAAAAAAAAA]
[+] EMBL AU102179             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CTGACACCATGTCCGACAGCTTCCAGACGCACGACTCCGACATCGACAACGCCTCCGCC GCCTGCGGCACGGTGGCTGCGGCGGCGNCGGCTTNCGGCGACGTGGCGCCGCCGAGGAATGGGTTCNTGACGGTGAAGGAGGACAACGACTGGTTCACCGGCCTCAA TTCGACGAGCTGCAGCCGCCGTACATGNTGAACCTGCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAAaa              ]




>consensus_10993#0
ACTTGGTCGCCACGGAAGCGCAGCATCAACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAAT
GGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCC
GGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGT
TGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCC
CTGGGATCTCCCTGAGAAGGCGTTGTTCGGGAGGAAAGAGTGGTACTTCTTCACGCCGAG
GGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAGCGGGGAGAGGGTACTGGAA
GGCGACGGGAGCCGACAAGCCGGTGGCGCCCAAGGGGAGCGCGAGGACGGTGGGGATCAA
GAAGGCGCTCGTGTTCTACTCCGGGAAGGCGCCGAGGGGGGTCAAGACGGACTGGATCAT
GCACGAGTACCGCCTCGCCGACGCCGACCGCGCCCCGGGCGGCAAGAAGGGCTCACAGAA
GCTGGACGGGTGGGTGCTGTGCCGGCTGTACAACAAGAAGAACAACTGGGAGAAGGTGAA
GCTGGAGCAGCAGGACGTGGCCTCCGTGGCGGCGGCGGCGCCGCGCAACCACCACCATCA
GAACGGCGAGGTCATGGACGCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCA
CGACTCCGACATCGACAACGCCTCCGCCGGCCTGCGGCACGGTGGCTGCGGCGGCGGCGG
CTTCGGCGACGTGGCGCCGCCGAGGAATGGGTTCGTGACGGTGAAGGAGGACAACGACTG
GTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCACAT
GCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCAT
CAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAG
CAAGAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTA
GATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGT
AGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACAA
AAAAAAAAAAAAA

consensusID : consensus_10993#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 523
fasta sequence

                              [CGGTGGCTGCGGCGGCGGCGGCTTTGGGCGACGTGGCGCCGCCAAAGAATGGGTTTCGTGACGGTAAAGGAGGCCAACGGATTGTTCCCCGGCCTCAATTTTGACAACTCACACCCCCGGTACATAATGACCTTCCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTTTGAGATGGATGGAGCAAGAAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACATCTCCTTTTGTTCTCATATCCTAAGCGAAACATATATGATTTTATCCTTCAAAAAAAAAAAAAAAAAAACTCGAGACTAG]

[-] EMBL AW155601             [CGGTGGCTGCGGCGGCGGCGGCTTTGGGCGACGTGGCGCCGCCAAAGAATGGGTTTCGTGACGGTAAAGGAGGCCAACGGATTGTTCCCCGGCCTCAATTTTGACAACTCACACCCCCGGTACATAATGACCTTCCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTTTGAGATGGATGGAGCAAGAAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACATCTCCTTTTGTTCTCATATCCTAAGCGAAACATATATGATTTTATCCTTCAAAAAAAAAAAAAAAAAAACTCGAGACTAG]
[+] EMBL AU056580             [                                                                                                                                                    TGCAGATGNTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCCATCAGCTCNCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGGAGCAAG AAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAACATCTCCTTTTGTTCTCATAaaaaaaa                                                       ]




>consensus_10993#1
CGGTGGCTGCGGCGGCGGCGGCTTTGGGCGACGTGGCGCCGCCAAAGAATGGGTTTCGTG
ACGGTAAAGGAGGCCAACGGATTGTTCCCCGGCCTCAATTTTGACAACTCACACCCCCGG
TACATAATGACCTTCCAGCACATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCAC
GACGGCGGCTACTTGCAGTCCATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTG
CCACCATTTTGAGATGGATGGAGCAAGAAAAAAGGTTGCTGTAGATAAAGGGCGGAAATA
GGAGTGATGGCTAGAAAATTATTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAA
GCATGATTCTGCAAATGTGGTGGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATA
TGCATTTGGTAATCTGCAAAACATCTCCTTTTGTTCTCATATCCTAAGCGAAACATATAT
GATTTTATCCTTCAAAAAAAAAAAAAAAAAAACTCGAGACTAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10993#0      ACTTGGTCGCCACGGAAGCGCAGCATCAACAAAGGCAGCAGCAGCAGCAGCAGCAGCAGC 60
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      AGCGTTGGTGGTGGTGGTGTGTCATCACCAACATTTTCACGAGAGGAGAAGGATGGAAAT 120
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GGCGGCGGCGGTTGGGGGCAGCGGGAGGAGGGACGCGGAGGCGGAGCTGAACCTGCCGCC 180
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GGGCTTCCGTTTCCACCCGACCGACGAGGAGCTCGTGGTGCACTACCTCTGCCGCAAGGT 240
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      TGCCCGGCAGCCGCTCCCCGTCCCAATCATCGCCGAGGTCGACCTCTACAAGCTCGACCC 300
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      CTGGGATCTCCCTGAGAAGGCGTTGTTCGGGAGGAAAGAGTGGTACTTCTTCACGCCGAG 360
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GGACCGGAAGTACCCGAACGGGTCGAGGCCGAACCGCGCAGCGGGGAGAGGGTACTGGAA 420
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GGCGACGGGAGCCGACAAGCCGGTGGCGCCCAAGGGGAGCGCGAGGACGGTGGGGATCAA 480
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GAAGGCGCTCGTGTTCTACTCCGGGAAGGCGCCGAGGGGGGTCAAGACGGACTGGATCAT 540
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GCACGAGTACCGCCTCGCCGACGCCGACCGCGCCCCGGGCGGCAAGAAGGGCTCACAGAA 600
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GCTGGACGGGTGGGTGCTGTGCCGGCTGTACAACAAGAAGAACAACTGGGAGAAGGTGAA 660
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GCTGGAGCAGCAGGACGTGGCCTCCGTGGCGGCGGCGGCGCCGCGCAACCACCACCATCA 720
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      GAACGGCGAGGTCATGGACGCGGCGGCGGCTGACACCATGTCCGACAGCTTCCAGACGCA 780
consensus_10993#1      ------------------------------------------------------------
                                                                                   

consensus_10993#0      CGACTCCGACATCGACAACGCCTCCGCCGGCCTGCGGCACGGTGGCTGCGGCGGCGGCGG 840
consensus_10993#1      ---------------------------------------CGGTGGCTGCGGCGGCGGCGG 21
                                                              *********************

consensus_10993#0      CTTCGG-CGACGTGGCGCCGCCGAGGAATGGGTT-CGTGACGGTGAAGGAGGACAACGAC 898
consensus_10993#1      CTTTGGGCGACGTGGCGCCGCCAAAGAATGGGTTTCGTGACGGTAAAGGAGGCCAACGGA 81
                       *** ** *************** * ********* ********* ******* *****  

consensus_10993#0      TGGTTCACCGGCCTCAACTTCGACGAGCTGCAGCCGCCGTACATGATGAACCTGCAGCAC 958
consensus_10993#1      TTGTTCCCCGGCCTCAATTTTGACAACTCACACCCCCGGTACATAATGACCTTCCAGCAC 141
                       * **** ********** ** *** *    ** ** * ****** **** * * ******

consensus_10993#0      ATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCC 1018
consensus_10993#1      ATGCAGATGCAGATGGTGAATCCGGCGGCGCCAGGGCACGACGGCGGCTACTTGCAGTCC 201
                       ************************************************************

consensus_10993#0      ATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTCTGAGATGGATGG 1078
consensus_10993#1      ATCAGCTCGCCGCAGATGAAGATGTGGCAGACAATCCTGCCACCATTTTGAGATGGATGG 261
                       *********************************************** ************

consensus_10993#0      AGCAAGAAAAA-GGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTA 1137
consensus_10993#1      AGCAAGAAAAAAGGTTGCTGTAGATAAAGGGCGGAAATAGGAGTGATGGCTAGAAAATTA 321
                       *********** ************************************************

consensus_10993#0      TTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGT 1197
consensus_10993#1      TTAGATTTACTAGAACGAAAATGATTAGAAATCTGGCAAGCATGATTCTGCAAATGTGGT 381
                       ************************************************************

consensus_10993#0      GGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAA 1257
consensus_10993#1      GGTAGATGCTTGCAGTATGTAATTCATTTGTTCAGTATATGCATTTGGTAATCTGCAAAA 441
                       ************************************************************

consensus_10993#0      CAAAAAAAAAAAAAAA-------------------------------------------- 1273
consensus_10993#1      CATCTCCTTTTGTTCTCATATCCTAAGCGAAACATATATGATTTTATCCTTCAAAAAAAA 501
                       **                                                          

consensus_10993#0      ----------------------
consensus_10993#1      AAAAAAAAAAACTCGAGACTAG 523