|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10997#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1704 fasta sequence
[TTATCCAACCTGAACCGCCCATGTTTCCATCGAGGGAGCAGTGAACCTTTCCCCGGAGCGCGCGAGGCGAATCGCGAATTCGACATTTCGAGTTCCCACGCGCTCCACCTGTTCGACGAAACGCCTGCCCGAGCGGTTTCGAGTTTCTACGCGCGCGACCTGTTCGACGAAACGCCTCTGCGCGCGTGCTCGGCCGCCATGGAGGGGTCGCCTAGCAAGAGGAGGGGGGTCACGGCCCCAGCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACGTCATCCTCAACATCATGTCTTTCCTGACCACGCGCCAGGCTGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCTCAACCTCTGGCGCTCCGTGCCCTGCATCAACGCCGACGTCGGCGAGTTCCAGCGGAGCGACACTGAGTGGGAAGAGTATGATCAAGAGAGGGAGTCGGCATTCAAGATGTTCATGGATAGGGGTGCTGGAGCTCCGCAACCCGGCCGCCCCGATACGCACGTTCCGGTTCAGGTGCTGCAGATTGGACGGATTCGAAGGCACCTCGGACGAGGCAGATATGAACAGATGGATTACCCACGCTATGCAGAAGCAGCCCTGGGTTCTGGATATTCTCGTGCTGTATGACGCATTGAAGCTCGATCACTCTGCGTTTACCTGCCGCTACCTCACAAGAATCAAGTTCATCAATGTTCTTATGATGCCAGGTTTCTTCCAGCAACTCGAGATGGGTTGTCCAGTATTGGAAAATCTCTTTTTAGATGAATCCATCGTTGCGGATGTTGAGATCTCCTCCAGGACACTGAAGGTTTTGACCATCAAGAGCACTCAGTTCTCCTATAAGTTCAGGACTACTATTTCGACCCCGAGTGTTACTTATCTGAAGTTATGGAGGCCTGTGAACGGCATATATGTGTTCAACGACATGCCATTACTAGTGACTTCAATTCTAGTACTTTATGATGTACAAGACTCTAGTGATTTCTGCCAAAATCTCAGGAGCCTTTCTGCTGCTAAAAGATTGGAGTTCGATTATTTTGGGAGGAAGCTGACAATGGAAAACAATTTGCAATTGTACCCAAAATTCAACAATCTTGTCAGCCTGACTCTTGGTCAATGGTGTTTGGATGCGAACTTCTATGGATTGGTTGTCTTCCTTCAGAACGCACCAAAACTGGAGAAGCTAACTCTGGAACTTGAAAAGAATACGCCGGAAAGAATCATTGGCAAGCTTGAAGATAGATCATTTACATGTGAGCACCTTACCCGCGTCGAAGTTGTATGCTCGGAGGGTGATCCCCTGGTCAAAGATGTGGTCAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCAGATCATACGCTGGTGCTAGATCGAGTATGCGTGACCTGCAATTTTCTGGTCTGAGGAGATATGAAACGTCAAAAAGGATCAAGCATTCTCTGAACATTCCATTCAAAAATCGCTCTCTTGCAGTTACATTCGTTGATTCCAGTTGAGTCAGAAAGCACATAGACATGTTTACTGCTTTTGTTTGGTGCTATGATGTCAGTAGAAGCAATCATGTATTGGTTCCTGTACTTGCATCCTTCTGTGATGTTCTGTTGTACAGAAGATACTGCATGTCTGCATGTACATGCTTGGGTACTCTATTTGGCCTTTATGTTTTACTGACATGAT]
[+] EMBL CF316460 [TTATCCAACCTGAACCGCCCATGTTTCCATCGAGGGAGCAGTGAACCTTTCCCCGGAGCGCGCGAGGCGAATCGCGAATTCGACATTTCGAGTTCCCACGCGCTCCACCTGTTCGACGAAACGCCTGCCCGAGCGGTTTCGAGTTTCTACGCGCGCGACCTGTTCGACGAAACGCCTCTGCGCGCGTGCTCGGCCGCCATGGAGGGGTCGCCTAGCAAGAGGAGGGGGGTCACGGCCCCAGCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACGTCATCCTCAACATCATGTCTTTCCTGACCACGCGCCAGGCTGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCTCAACCTCTGGCGCTCCGTGCCCTGCATCAACGCCGACGTCGGCGAGTTCCAGCGGAGCGACACTGAGTGGGAAGAGTATGATCAAGAGAGGGAGTCGGCATTCAAGATGTTCATGGATAGGGGTGCTGGAGCTCCGCAACCCGGCCGCCCCGATACGCACGTTCCGGTTCAGGTGCTGCAGATTGGACGGATTCGAAGGCACCTCGGACGAGGCAGATATGAACAGATGGATTACCCACGCTATGCAGAAGCAGCCCTGGGTTCTGGATATTCTCGTGCTGTATGACGCATTGAAGCTCGATCACTCTGCGTTTACCTGCCGCTACCTCACAAGAATCAAGTTCATCAATGTT ]
[+] EMBL AK063687 [ GTGAACCTTTCCCCGGAGCGCGCGAGGCGAATCGCGAATTCGACATTTCGAGTTCCCACGCGCTCCACCTGTTCGACGAAACGCCTGCCCGAGCGGTTTCGAGTTTCTACGCGCGCGACCTGTTCGACGAAACGCCTCTGCGCGCGTGCTCGGCCGCCATGGAGGGGTCGCCTAGCAAGAGGAGGGGGGTCACGGCCCCAGCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACGTCATCCTCAACATCATGTCTTTCCTGACCACGCGCCAGGCTGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCTCAACCTCTGGCGCTCCGTGCCCTGCATCAACGCCGACGTCGGCGAGTTCCAGCGGAGCGACACTGAGTGGGAAGAGTATGATCAAGAGAGGGAGTCGGCATTCAAGATGTTCATGGATA GGGTGCTGGAGCTCCGCAACCCGGCCGCCCCGATACGCACGTTCCGGTTCAGGTGCTGCAGATTGGACGGATTCGAAGGCACCTCGGACGAGGCAGATATGAACAGATGGATTACCCACGCTATGCAGAAGCAGCCCTGGGTTCTGGATATTCTCGTGCTGTATGACGCATTGAAGCTCGATCACTCTGCGTTTACCTGCCGCTACCTCACAAGAATCAAGTTCATCAATGTTCTTATGATGCCAGGTTTCTTCCAGCAACTCGAGATGGGTTGTCCAGTATTGGAAAATCTCTTTTTAGATGAATCCATCGTTGCGGATGTTGAGATCTCCTCCAGGACACTGAAGGTTTTGACCATCAAGAGCACTCAGTTCTCCTATAAGTTCAGGACTACTATTTCGACCCCGAGTGTTACTTATCTGAAGTTATGGAGGCCTGTGAACGGCATATATGTGTTCAACGACATGCCATTACTAGTGACTTCAATTCTAGTACTTTATGATGTACAAGACTCTAGTGATTTCTGCCAAAATCTCAGGAGCCTTTCTGCTGCTAAAAGATTGGAGTTCGATTATTTTGGGAGGAAGCTGACAATGGAAAACAATTTGCAATTGTACCCAAAATTCAACAATCTTGTCAGCCTGACTCTTGGTCAATGGTGTTTGGATGCGAACTTCTATGGATTGGTTGTCTTCCTTCAGAACGCACCAAAACTGGAGAAGCTAACTCTGGAACTTGAAAAGAATACGCCGGAAAGAATCATTGGCAAGCTTGAAGATAGATCATTTACATGTGAGCACCTTACCCGCGTCGAAGTTGTATGCTCGGAGGGTGATCCCCTGGTCAAAGATGTGGTCAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCAGATCATACGCTGGTGCTAGATCGAGTATGCGTGACCTGCAATTTTCTGGTCTGAGGAGATATGAAACGTCAAAAAGGATCAAGCATTCTCTGAACATTCCATTCAAAAATCGCTCTCTTGCAGTTACATTCGTTGATTCCAGTTGAGTCAGAAAGCACATAGACATGTTTACTGCTTTTGTTTGGTGCTATGATGTCAGTAGAAGCAATCATGTATTGGTTCCTGTACTTGCATCCTTCTGTGATGTTCTGTTGTACAGAAGATACTGCATGTCTGCATGTACATGCTTGGGTACTCTATTTGGCCTTTATGTTTTACTGACATGAT]
consensusID : consensus_10997#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 631 fasta sequence
[ACTGGACTGAAGGAGTAGAAAATGTCCATGTTTCCATCGAGGGAGCAGTAAAAAACCATTCCCCGGAGCGCTCGAGGCGAATCGCGAATTCGACATTTCGAGTTTCCACGCGCGCCACCTGTTCGACGAAACGCCTGCCTGCGCGGTTTCGAGGTTCCACGCGCGCCACCTGTTCGACGAAACGCCTCTGCGCGCGTGCTCGGCCGCCATGGAGGGTTCACCTAGCAAGAGCAGGGGGGTCACGGGCCCAGCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACATCATTCTCAATATCATGTCCTTCCTGACCACGCGCCAGGCTGTGCAGACGTGTGTGCTGTCGCGGCGGTGGCGCAACCTCTGGCGCTCCGTGCCCTGCATCAACTCCGACATAGACGAGTTCACGCGGGACTCCGACTCGGAAGGATACTATGATGAAAAGACGGAATTGGCGTTCATTATGTTCATGGAGAGGGTGATGGAGCTCCGTGACCCTGCTGCCTTGATAAGCACGTTTCAGTTCAGGTGCAAATTTGAATTGGATGAAGGATTCGATGATATCTCGGACCCTGAAGATATCAACGCATGGATTAGCCACGCTGTGCAGAAGCAGGCA]
[+] EMBL CF329018 [ACTGGACTGAAGGAGTAGAAAATGTCCATGTTTCCATCGAGGGAGCAGTAAAAAACCATTCCCCGGAGCGCTCGAGGCGAATCGCGAATTCGACATTTCGAGTTTCCACGCGCGCCACCTGTTCGACGAAACGCCTGCCTGCGCGGTTTCGAGGTTCCACGCGCGCCACCTGTTCGACGAAACGCCTCTGCGCGCGTGCTCGGCCGCCATGGAGGGTTCACCTAGCAAGAGCAGGGGGGTCACGGGCCCAGCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACATCATTCTCAATATCATGTCCTTCCTGACCACGCGCCAGGCTGTGCAGACGTGTGTGCTGTCGCGGCGGTGGCGCAACCTCTGGCGCTCCGTGCCCTGCATCAACTCCGACATAGACGAGTTCACGCGGGACTCCGACTCGGAAGGATACTATGATGAAAAGACGGAATTGGCGTTCATTATGTTCATGGAGAGGGTGATGGAGCTCCGTGACCCTGCTGCCTTGATAAGCACGTTTCAGTTCAGGTGCAAATTTGAATTGGATGAAGGATTCGATGATATCTCGGACCCTGAAGATATCAACGCATGGATTAGCCACGCTGTGCAGAAGCAGGCA]
consensusID : consensus_10997#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 615 fasta sequence
[TGAAAGATAGATCATTTACATGTGAGCACCTTACGCGTGTTGAAGTCGTATGCTCGG-AGGATGATCCCCTGGTCGAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGAC-GTGGTGAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATAACATTTGTTGCTCCAGTTGAGTCCGAAAGCACATATAAACATGTATACTGCTCTTGTTTGGTGCTATGATATGAGTAGAAACAATCATGTCTTAGTAGTACTATGTAAGTGAAAGGTCTGTCACCTTGTTCTGTTGATGTTCTATTGTCCTATAACCAAGACGTACTGCAAGTTGATGCTTGAGTACTCTATTATTTTGCCTTTAAAAA]
[+] EMBL AU094243 [TGAAAGATAGATCATTTACATGTGAGCACNTTACGCGTGTTGAAGTCGTATGCTCGGAAGGATGATCCCCTGGTCGAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGAC GTGGTGAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATAACATTTGTTGCTCCAGTTGAGTCCGAAAGCACATATAAACATGTATACTGCTCTTGTTTGGTGCTATGATATGAGTAGAAACAATCATGTCTTAGTAGTACTATGTAAGTGAAAGGTCTGTCACCTTGTTCTGTTGATGTTCTATTGTCCTATAACCAAGACGTACTGCAAGTTGATGCTTGAGTACTCTATTATTTTGCCTTTAAAAA]
[+] EMBL C73306 [ AAGATAGATCATTTACATGTNAGCACCTTACGCGTGTTGAAGTCGTATGCTCGG AGGATGATCCCCTGGTCGAAG CGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTNAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGGTGGTG ACTTCTTTGTTAATAGTGGNCTNACCTCTTCTCAGGTTCATATCATAACATTTGTTGCTCCAG TNAGTCCGAAA NACATATAAca ]
[+] EMBL AU172941 [ AAGATAGATCATTTACATGTGAGCACCTTACGCGTGTTGAAGTCGTATGCTCGG AGGATGATCCCCTGGTCGAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGAC GTGGTGAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATAACATTTGTTGCTCCAGTTGAGTCCGA ]
[+] EMBL AU172940 [ GGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCNCCTTACGTGTGTTGAAGTCTTATGCTCGGAGGATGATCCCCTGGTCAAAGAC GTGGTGAACTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATAACATTTGTTGCTCCAGTTGAGTCCGAAAGCACATATAAACATGTATACTGCTCTTGTTTGGTGCTATGATATGAGTAGAAACAATCATGTCTTAGTAGTACTATGTAAGTGAAAGGTCTGTCNCCTTGTTCTGTTGATGTTCTATTGTCCTATAACCAAGACGTACTGCAAGTTGATGCTTGAGTACTCTATTATTTTGCCTTTAAAAA]
consensusID : consensus_10997#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 471 fasta sequence
[AGTTCAATTATATTGGGAAAGAGCTGACAATGGAAAACAATTTGCAATTGTACCCAAAATTCAACAATCTTGTCAGACTGACTCTTGGTCAATGGTGTCTGGATGCAAACTTCTATGGATTGATGGTCTTCCTTCAGACTTCACCAAAACTGGAGAAGCTAACTCTAAAGATTGAAAAGGAAAAAACACAAAGAATCATTGGCAAGATTGAAGATAGATCATTTACATGTGAGCACCTTACGCGTGTTGAAATCGTATGCTCGGAGGATGATCCCCTGGTCAAAGATGTGGTCACCTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGATGTAGATCAAGGATGTGTAACCTGCATGGTTAATTGGTTATATATCAACAAGTTGCAACAATTTTTTGTATCAGTGGAAAATAAGAAAATCACAAAACTGTTAATTTTTTCATACAAAAAAAA]
[-] EMBL CF329019 [AGTTCAATTATATTGGGAAAGAGCTGACAATGGAAAACAATTTGCAATTGTACCCAAAATTCAACAATCTTGTCAGACTGACTCTTGGTCAATGGTGTCTGGATGCAAACTTCTATGGATTGATGGTCTTCCTTCAGACTTCACCAAAACTGGAGAAGCTAACTCTAAAGATTGAAAAGGAAAAAACACAAAGAATCATTGGCAAGATTGAAGATAGATCATTTACATGTGAGCACCTTACGCGTGTTGAAATCGTATGCTCGGAGGATGATCCCCTGGTCAAAGATGTGGTCACCTTCTTTGTTAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCCGGATGTAGATCAAGGATGTGTAACCTGCATGGTTAATTGGTTATATATCAACAAGTTGCAACAATTTTTTGTATCAGTGGAAAATAAGAAAATCACAAAACTGTTAATTTTTTCATACAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 TTATCCAACCTGAACCGCCCATGTTTCCATCGAGGGAGCAGTGAACCTTTCCCCGGAGCG 60
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 CGCGAGGCGAATCGCGAATTCGACATTTCGAGTTCCCACGCGCTCCACCTGTTCGACGAA 120
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 ACGCCTGCCCGAGCGGTTTCGAGTTTCTACGCGCGCGACCTGTTCGACGAAACGCCTCTG 180
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 CGCGCGTGCTCGGCCGCCATGGAGGGGTCGCCTAGCAAGAGGAGGGGGGTCACGGCCCCA 240
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 GCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGGACGACGTCATCCTCAACATC 300
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 ATGTCTTTCCTGACCACGCGCCAGGCTGTGCAGACGTGCGTGCTGTCGCGGCGGTGGCTC 360
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 AACCTCTGGCGCTCCGTGCCCTGCATCAACGCCGACGTCGGCGAGTTCCAGCGGAGCGAC 420
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 ACTGAGTGGGAAGAGTATGATCAAGAGAGGGAGTCGGCATTCAAGATGTTCATGGATAGG 480
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 GGTGCTGGAGCTCCGCAACCCGGCCGCCCCGATACGCACGTTCCGGTTCAGGTGCTGCAG 540
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 ATTGGACGGATTCGAAGGCACCTCGGACGAGGCAGATATGAACAGATGGATTACCCACGC 600
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 TATGCAGAAGCAGCCCTGGGTTCTGGATATTCTCGTGCTGTATGACGCATTGAAGCTCGA 660
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 TCACTCTGCGTTTACCTGCCGCTACCTCACAAGAATCAAGTTCATCAATGTTCTTATGAT 720
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 GCCAGGTTTCTTCCAGCAACTCGAGATGGGTTGTCCAGTATTGGAAAATCTCTTTTTAGA 780
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 TGAATCCATCGTTGCGGATGTTGAGATCTCCTCCAGGACACTGAAGGTTTTGACCATCAA 840
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 GAGCACTCAGTTCTCCTATAAGTTCAGGACTACTATTTCGACCCCGAGTGTTACTTATCT 900
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 GAAGTTATGGAGGCCTGTGAACGGCATATATGTGTTCAACGACATGCCATTACTAGTGAC 960
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 ------------------------------------------TGAAAGATAGATCATTTA 18
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 TTCAATTCTAGTACTTTATGATGTACAAGACTCTAGTGATTTCTGCCAAAATCTCAGGAG 1020
consensus_10997#1 ----------------------------------ACTGGACTGAAGGAGTAGAAAATGTC 26
consensus_10997#2 CATGTGAGCACCTTACGCGTGTTGAAGTCGTATGCTCGGAGGATGATCCCCTGGTCGAAG 78
consensus_10997#3 ------------------------AGTTCAATTATATTGGGAAAGAGCTGACAATGGAAA 36
consensus_10997#0 CCTTTCTGCTGCTAAAAGAT-TGGAGTTCGATTATTTTGGGAGGAAGCTGACAATGGAAA 1079
consensus_10997#1 CATGTTTCCATCGAGGGAGCAGTAAAA--AACCATTCCCCGGA-GCGCTCGAGGCGAATC 83
* * * *
consensus_10997#2 ACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAGGTTCATATCATACGCC 138
consensus_10997#3 ACAATTTGCAATTGTACCCAAA-ATTCAACAA---TCTTGTCAGACTGA-------CTCT 85
consensus_10997#0 ACAATTTGCAATTGTACCCAAA-ATTCAACAA---TCTTGTCAGCCTGA-------CTCT 1128
consensus_10997#1 GCGAATTCGAC--ATTTCGAGTTTCCACGCGCGCCACCTGTTCGACGAAACGCCTGCCTG 141
* * * * * * * * * * *
consensus_10997#2 GGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGTCTTATGCTCGGAGGAT 198
consensus_10997#3 TGGTCAATGGTGTCTGGATGCAAACTTCT---ATGGATTGATGGTCTTCCTTCAGA---- 138
consensus_10997#0 TGGTCAATGGTGTTTGGATGCGAACTTCT---ATGGATTGGTTGTCTTCCTTCAGA---- 1181
consensus_10997#1 CGCGGTTTCGAGGTTCCACGCGCGCCACCTG-TTCGACGAAACGCCTCTGCGCGCGTG-- 198
* * * * * * * * *
consensus_10997#2 GATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTAAATAGTGGACTGACCTCTGCTCAG 258
consensus_10997#3 -----CTTCACCAAAACTGGAGAAGCTAACTCTAAAGATTGAAAAGGAAAAAACACAAAG 193
consensus_10997#0 -----ACGCACCAAAACTGGAGAAGCTAACTCTGGAACTTGAAAAGAATACGCCGGAAAG 1236
consensus_10997#1 -----CTCGGCC---GCCATGGAGGGTTCACCTAGCAAGAGCAGGGGGGTCACGGGCCCA 250
* * * *
consensus_10997#2 GTTCATATCATACGCCGGGTGTAGATCAAGTACATGTGAGCACCTTACGTGTGTTGAAGT 318
consensus_10997#3 AATCATTGGCAAGATTGAAGATAGATCATTTACATGTGAGCACCTTACGCGTGTTGAAAT 253
consensus_10997#0 AATCATTGGCAAGCTTGAAGATAGATCATTTACATGTGAGCACCTTACCCGCGTCGAAGT 1296
consensus_10997#1 GCGCACACTGACGACGGGGACTGGTTCAGCGACGTCCCGG-ACGACATCATTCTCAATAT 309
** * * * *** ** * * ** * * * *
consensus_10997#2 CTTATGCTCGGAGGATGATCCCCTGGTCAAAGACGTGGTGAACTTCTTTGTTAATAGTGG 378
consensus_10997#3 CGTATGCTCGGAGGATGATCCCCTGGTCAAAGATGTGGTCACCTTCTTTGTTAATAGTGG 313
consensus_10997#0 TGTATGCTCGGAGGGTGATCCCCTGGTCAAAGATGTGGTCAACTTCTTTGTTAATAGTGG 1356
consensus_10997#1 CATGTCCTTCCTGACCACGCGCCAGGCTGTGCAGACG--TGTGTGCTGTCGCGGCGGTGG 367
* * ** * * ** ** * * * ** * ****
consensus_10997#2 ACTGACCTCTGCTCAGGTTCATATCATAACATTTGTTGCTCCAGTTGAGTCCGAAAGCAC 438
consensus_10997#3 ACTGACCTCTGCTCAGGTTCATATCATA--------CGCCGGATGTAGATC---AAGGAT 362
consensus_10997#0 ACTGACCTCTGCTCAGGTTCAGATCATA--------CGCTGGTGCTAGATC---GAGTAT 1405
consensus_10997#1 CGCAACCTCTGGC--GCTCCGTGCCCTG----------CATCAACTCCGAC---ATAGAC 412
******* * * * * * * * * *
consensus_10997#2 ATATAAACATGTA---TACTGCTCTTGTTTGGTGCTATGATATGAGTAGAAACAATCATG 495
consensus_10997#3 GTGTAACC-TGCA---TGGTTAATTGGTTATATATCA----ACAAGTTGCAACAATTTT- 413
consensus_10997#0 GCGTGACC-TGCAATTTTCTGGTCTGAGGAGATATGAAACGTCAAAAAGGATCAAGCATT 1464
consensus_10997#1 GAGTTCACGCGGG--ACTCCGACTCGGAAGGATACTATG--ATGAAAAGACGGAATTGGC 468
* * * * * * * **
consensus_10997#2 TCTTAGTAGTACTATGTAAGTGAAAGGTCTGTCACCTTGTTCTGTTGATGTTCTATTGTC 555
consensus_10997#3 TTGTATCAGTGGAAAATAAGAAAA-------TCACAAAA--CTGTTAATTTTTT-----C 459
consensus_10997#0 CTCTGAACATTCCATTCAAAAATCG---CTCTCTTGCAGTTACATTCGTTGATTCCAGTT 1521
consensus_10997#1 GTTCATTATGTTCATGGAGAGGGTGATGGAGCTCCGTGACCCTGCTGCCTTGATAAGCAC 528
* * * *
consensus_10997#2 CTATAA--CCAAG-ACGTACTGCAAGTTGATGCTTGAGTACTCTATTATTTTGCCTTTAA 612
consensus_10997#3 ATACAA--AAAAA-A--------------------------------------------- 471
consensus_10997#0 GAGTCA--GAAAGCACATAGACATGTTTACTGCTTTTGTTTGGTGCTATGATGTCAGTAG 1579
consensus_10997#1 GTTTCAGTTCAGGTGCAAATTTGAATTGGATGAAGGATTCGATGATATCTCGGACCCTGA 588
* *
consensus_10997#2 AAA--------------------------------------------------------- 615
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 AAGCAATCATGTATTGGTTCCTGTACTTGCATCCTTCTGTGATGTTCTGTTGTACAGAAG 1639
consensus_10997#1 AGATATCAACGCATGGATTAGCCACGCTGTGCAGAAGCAGGCA----------------- 631
consensus_10997#2 ------------------------------------------------------------
consensus_10997#3 ------------------------------------------------------------
consensus_10997#0 ATACTGCATGTCTGCATGTACATGCTTGGGTACTCTATTTGGCCTTTATGTTTTACTGAC 1699
consensus_10997#1 ------------------------------------------------------------
consensus_10997#2 -----
consensus_10997#3 -----
consensus_10997#0 ATGAT 1704
consensus_10997#1 -----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||