These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11007#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1826 fasta sequence [TGCGAAGCGTGAGAGAGAAACGTACGCGACGCGACGAGCTCCTACTCCGATCTCCCCGATGCGATCTCGCCAAACCCTAATCCCACCCACCACCGCGCCGGAGTCCTAGC-GCCGCCCGCAGCCGCCGCC-GCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCGCCTCCTCCTCGCTCTTCGCGCGCCTCCCGCCGCCCTCCTACGTCCGCCGCGGGGC-AGCCGCGCCGCCGTCCTTCGCGTACGTGCTGTCGGGGGGGAGAGGGGAGGGG-AGGAAGCTGCTGCGGCTGCTGCTCGCGGTCTACCATCCCAGGAACCGCTACCTGCTCCACCTCTCGGCCGATGCGCCCGAGTCCGAGCGCGTCGAGCTGGCCGCCGCCGTGTCGCGCGCCGCGCCCGCCGTGCGCGCCTTCGGGAATGTCGATGTCGTTGGCCGCCCCACCGCTGGCACACCGATGGGATCCTCGGGACTCGCGGCTACGCTCCGCGCCGCGGCCGCGCTGCTGCGCCTGGATTCCGAGTGGGACTGGTTCGTCACGCTCAACGCCGCCGACTACCCCCTTGTCACCCAGGACGACTTGATTCATGTCTTCTCCTCAGTGCCAAGGCATCTCAACTTCATCGATCACACTAGTGATATTGGATGGAAAGAGACTCAGAGAGTGCAACCAATCATAGTAGATGCTGGAATATACTTGGCAGGAAGAAATCAGTTCTTCCAAGCCACAGAGAAACGTGATACTCCTGATGGTTTCAAATTCTTCACAGGTTCTCCGTGGGTCATTCTAAATCGACGGTTTATAGAGTATTGCATATTTGGTTGGGAGAATCTCCCTCGAACTCTTCTCATGTACTTCACAAACGTAATGCTACCTCAGGAAGGGTATTTCCACTCAGTTGTATGCAACTCAGACTTCCGTAACTCCACAGTTAACAGCGACATGCGGTATATGGAATGGGATGATCCACCCCAGATGGAACCCCATTTTCTGAACACGACACATTATGATGAGATAGTGGAGAGCGGAGTGCCTTTTGCTAGAAAGTTTCGGGAGAATGAACCGCTGCTGGACAAGATTGATGAAAGAGTACTCCACCGTTGGCGTCACAGACCTGTTCCTGGTGCCTGGTGCACAGGCAGAAAAAGGTGGTTCAATGATCCATGCTCCCAATGGAGCAATGTCAACATTGTAAGACCTGGTCCCCAGGCTGAGAAGTTCCGCAAACATATGAATCAGATCATAGAGGAATCTGCATCAGGCAACAACTCATGCAAGCAATAGCAGCAATGAAGCGCGAGATTTCACTTCCCATGTTTGAAGCGATGAGCTTTTCTCATTTTGCATAGAGGGGCTCTTCACGAACTTCAGCAGTTAACGCTTCCAGAGCGAACATTTTTGCACCTGGGTTACAAGCACACGTCCAAAGGTGAGATGGGTTTATTCTTTCCAGATTTTTTGGTAACTGTCATGGCTTCAAGGGCCTCACTGCATAGCGCATACTAGCTTAGTTGGAAGTCAGAGTGCTGATGGTCGGAGCACCAAAGCTAATAGGCAGTGTAATTATTAGTGATCAGTTGAATGACTTGTGCGACTGTTTATAGAACTGATGGAATTCTGGGTGCTCCCATACA-GGATTGAGAAAAATGAAGAGTGGGTGAT-GGTGG-TTGGATTCTTACTGGTTGNGGGTAATACAATGCTCTTTGCGCCCAAAAA] [+] EMBL AK105432 [TGCGAAGCGTGAGAGAGAAACGTACGCGACGCGACGAGCTCCTACTCCGATCTCCCCGATGCGATCTCGCCAAACCCTAATCCCACCCACCACCGCGCCGGAGTCCTAGC GCCGCCCGCAGCCGCCGCC GCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCGCCTCCTCCTCGCTCTTCGCGCGCCTCCCGCCGCCCTCCTACGTCCGCCGCGGGGC AGCCGCGCCGCCGTCCTTCGCGTACGTGCTGTC GGGGGGAGAGGGGAGGGG AGGAAGCTGCTGCGGCTGCTGCTCGCGGTCTACCATCCCAGGAACCGCTACCTGCTCCACCTCTCGGCCGATGCGCCCGAGTCCGAGCGCGTCGAGCTGGCCGCCGCCGTGTCGCGCGCCGCGCCCGCCGTGCGCGCCTTCGGGAATGTCGATGTCGTTGGCCGCCCCACCGCTGGCACACCGATGGGATCCTCGGGACTCGCGGCTACGCTCCGCGCCGCGGCCGCGCTGCTGCGCCTGGATTCCGAGTGGGACTGGTTCGTCACGCTCAACGCCGCCGACTACCCCCTTGTCACCCAGGACGACTTGATTCATGTCTTCTCCTCAGTGCCAAGGCATCTCAACTTCATCGATCACACTAGTGATATTGGATGGAAAGAGACTCAGAGAGTGCAACCAATCATAGTAGATGCTGGAATATACTTGGCAGGAAGAAATCAGTTCTTCCAAGCCACAGAGAAACGTGATACTCCTGATGGTTTCAAATTCTTCACAGGTTCTCCGTGGGTCATTCTAAATCGACGGTTTATAGAGTATTGCATATTTGGTTGGGAGAATCTCCCTCGAACTCTTCTCATGTACTTCACAAACGTAATGCTACCTCAGGAAGGGTATTTCCACTCAGTTGTATGCAACTCAGACTTCCGTAACTCCACAGTTAACAGCGACATGCGGTATATGGAATGGGATGATCCACCCCAGATGGAACCCCATTTTCTGAACACGACACATTATGATGAGATAGTGGAGAGCGGAGTGCCTTTTGCTAGAAAGTTTCGGGAGAATGAACCGCTGCTGGACAAGATTGATGAAAGAGTACTCCACCGTTGGCGTCACAGACCTGTTCCTGGTGCCTGGTGCACAGGCAGAAAAAGGTGGTTCAATGATCCATGCTCCCAATGGAGCAATGTCAACATTGTAAGACCTGGTCCCCAGGCTGAGAAGTTCCGCAAACATATGAATCAGATCATAGAGGAATCTGCATCAGGCAACAACTCATGCAAGCAATAGCAGCAATGAAGCGCGAGATTTCACTTCCCATGTTTGAAGCGATGAGCTTTTCTCATTTTGCATAGAGGGGCTCTTCACGAACTTCAGCAGTTAACGCTTCCAGAGCGAACATTTTTGCACCTGGGTTACAAGCACACGTCCAAAGGTGAGATGGGTTTATTCTTTCCAGATTTTTTGGTAACTGTCATGGCTTCAAGGGCCTCACTGCATAGCGCATACTAGCTTAGTTGGAAGTCAGAGTGCTGATGGTCGGAGCACCAAAGCTAATAGGCAGTGTAATTATTAGTGATCAGTTGAATGACTTGTGCGACTGTTTATAGAACTGATGGAATTCTGGGTGCTCCCATACA GGATTGAGAAAAATGAAGAGTGGGTGAT GGTGG ] [+] EMBL AK073465 [ GAAACGTACGCGATGCGACGAGCTCCTACTCCGATCTCCCCGATGCGATCTCGCCAAACCCTAATCCCACCCACCACCGCGCCGGAGTCCTAGC GCCGCCCGCAGCCGCCGCC GCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCGCCTCCTCCTCGCTCTTCGCGCGCCTCCCGCCGCCCTCCTACGTCCGCCGCGGGGC AGCCGCGCCGCCGTCCTTCGCGTACGTGCTGTCGGGGGGGAGAGGGGAGGGG AGGAAGCTGCTGCGGCTGCTGCTCGCGGTCTACCATCCCAGGAACCGCTACCTGCTCCACCTCTCGGCCGATGCGCCCGAGTCCGAGCGCGTCGAGCTGGCCGCCGCCGTGTCGCGCGCCGCGCCCGCCGTGCGCGCCTTCGGGAATGTCGATGTCGTTGGCCGCCCCACCGCTGGCACACCGATGGGATCCTCGGGACTCGCGGCTACGCTCCGCGCCGCGGCCGCGCTGCTGCGCCTGGATTCCGAGTGGGACTGGTTCGTCACGCTCAACGCCGCCGACTACCCCCTTGTCACCCAGGACGACTTGATTCATGTCTTCTCCTCAGTGCCAAGGCATCTCAACTTCATCGATCACACTAGTGATATTGGATGGAAAGAGACTCAGAGAGTGCAACCAATCATAGTAGATGCTGGAATATACTTGGCAGGAAGAAATCAGTTCTTCCAAGCCACAGAGAAACGTGATACTCCTGATGGTTTCAAATTCTTCACAGGTTCTCCGTGGGTCATTCTAAATCGACGGTTTATAGAGTATTGCATATTTGGTTGGGAGAATCTCCCTCGAACTCTTCTCATGTACTTCACAAACGTAATGCTACCTCAGGAAGGGTATTTCCACTCAGTTGTATGCAACTCAGACTTCCGTAACTCCACAGTTAACAGCGACATGCGGTATATGGAATGGGATGATCCACCCCAGATGGAACCCCATTTTCTGAACACGACACATTATGATGAGATAGTGGAGAGCGGAGTGCCTTTTGCTAGAAAGTTTCGGGAGAATGAACCGCTGCTGGACAAGATTGATGAAAGAGTACTCCACCGTTGGCGTCACAGACCTGTTCCTGGTGCCTGGTGCACAGGCAGAAAAAGGTGGTTCAATGATCCATGCTCCCAATGGAGCAATGTCAACATTGTAAGACCTGGTCCCCAGGCTGAGAAGTTCCGCAAACATATGAATCAGATCATAGAGGAATCTGCATCAGGCAACAACTCATGCAAGCAATAGCAGCAATGAAGCGCGAGATTTTACTTCCCATGTTTGAAGCGATGAGCTTTTCTCATTTTGCATAGAGGGGCTCTTCAC ] [+] EMBL AU161457 [ ACGCGACGCGACGAGCTCCTACTCCGATCTCCCCGATGCGATCTCGCCAAACCCTAATCCCACCCACCACCGCGCCGGAGTCCTAGC GCCGCCCGCAGCCGCCGCC GCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCG CTCCT CTCGCTCTTCGCGCGCCTTCCGCCG CCTCCTACGTCCGCCGCGGGGCAAGCCGCGCCGNCGTCCTTCGCGTACGTGCTGTCGGGGGGGAGAGGGGAGGGGAAGGAA CTGNTGCGGCTGCTGCTCGCGG CTACCATTCCA ] [+] EMBL AU166772 [ GCGACGAGCTCCTACTCCGATCTCCCCGATGCGATCTCGCCAAACCCTAATCCCACCCACCACCGCGCCGGAGTCCTAGCAGCCGCCCGCAGCCGCCGCCAGCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCGCCTCCTCCTCGCTCTTCGCGCGCCTCCCGCCGCCCTCCTACGTCCGCCGCGGGGC AGCCGCGCCGCCGTCCTTCGCGTACGTGCTGTCGGGGGG ] [+] EMBL AU161458 [ CCCACCACCGCGCCGGAGTCCTAGC GCCGCCCGCAGCCGCCGCC GCCGTCCGGATGCTGCGGCCGTGACCTCCTCCTCCTCCGCCTCTGACATCCCAGCCATGGGAGCCGCCGACAAGTGGCTCCTCCCGCTCGTGTCGGTCTCCTTCGTCTCGCTGCTGCTCTTCCTCTCCGCGCTCTCGGGCTTCTCCGCCTCCTCCTCGCTCTTCGCGCGCCTCCCGCCGCCCTCCTACGTCCGCCGCGGGGC AGCCGCGCCGCCGTCCTTCGCGTACGTGCTGTCGGGGGGGAGAGGGGAGGGG AGGAAGCTGCTGCGGCTGCTGCTCGCGGTCTACCATCCCAGGAACCGCTACCTGCTCCACCTCTCGGCCGATGCGCCCGAGTCCGAGCGCGTCGAGCTGGCCGCCGCCGTGTCGCGCGCCGCGCCCGCCGTGCGCGCCTTCGGGAATGTCGATGTCGTTGGCCGCCCCACCGCTGGCACACCGATGGGATCCTCGGGACTCGCGGCTAC ] [+] EMBL AK069510 [ TTGGTTGGGAGAATCTCCCTCGAACTCTTCTCATGTACTTCACAAACGTAATGCTACCTCAGGAAGGGTATTTCCACTCAGTTGTATGCAACTCAGACTTCCGTAACTCCACAGTTAACAGCGACATGCGGTATATGGAATGGGATGATCCACCCCAGATGGAACCCCATTTTCTGAACACGACACATTATGATGAGATAGTGGAGAGCGGAGTGCCTTTTGCTAGAAAGTTTCGGGAGAATGAACCGCTGCTGGACAAGATTGATGAAAGAGTACTCCACCGTTGGCGTCACAGACCTGTTCCTGGTGCCTGGTGCACAGGCAGAAAAAGGTGGTTCAATGATCCATGCTCCCAATGGAGCAATGTCAACATTGTAGGACCTGGTCCCCAGGCTGAGAAGTTCCGCAAACATATGAATCAGATCATAGAGGAATCTGCATCAGGCAACAACTCATGCAAGCAATAGCAGCAATGAAGCGCGAGATTTCACTTCCCATGTTTGAAGCGATGAGCTTTTCTCATTTTGCATAGAGGGGCTCTTCACGAACTTCAGCAGTTAACGCTTCCAGAGCGAACATTTTTGCACCTGGGTTACAAGCACACGTCCAAAGGTGAGATGGGTTTATTCTTTCCAGATTTTTTGGTAACTGTCATGGCTTCAAGGGCCTCACTGCATAGCGCATACTAGCTTAGTTGGAAGTCAGAGTGCTGATGGTCGGAGCACCAAAGCTAATAGGCAGTGTAATTATTAGTGATCAGTTGAATGACTTGTGCGACTGTTTATAGAACTGATGGAATTCTGGGTGCTCCCATACA GGATTGAGAAAAATGAAGAGTGGGTGAT GGTGG TTGGATTCTTAC ] [+] EMBL CA764386 [ GATGAGATAGTGGAGAGCGGAGTGCCTTTTGCTAGAAAGTTTCGGGAGAATGAACCGCTGCTGGACAAGATTGATGAAAGAGTACTCCACCGTTGGCGTCACAGACCTGTTCCTGGTGCCTGGTGCACAGGCAGAAAAAGGTGGTTCAATGATCCATGCTCCCAATGGAGCAATGTCAACATTGTAAGACCTGGTCCCCAGGCTGAGAAGTTCCGCAAACATATGAATCAGATCATAGAGGAATCTGCATCAGGCAACAACTCATGCAAGCAATAGCAGCAATGAAGCGCGAGATTTCACTTCCCATGTTTGAAGCGATGAGCTTTTCTCATTTTGCATAGAGGGGCTCTTCACGAACTTCAGCAGTTAACGCTTCCAGAGCGAACATTTTTGCACCTGGGTTACAAGCACACGTCCAAAGGTGAGATGGGTTTATTCTTTCCAGATTTTTTGGTAACTGTCATGGCTTCAAGGGCCTCACTGCATAGCGCATACTAGCTTAGTTGGAAGTCAGAGTGCTGATGGTCGGAGCACCAAAGCTAATAGGCAGTGTAATTATTAGTGATCAGTTGAATGACTTGTGCGACTGTTTATAGAACTGATGGAATTCTGGGTGCTCCCATACA GGATTGAGAAAAATGAAGAGTGGGTGATGGGTGGNTTGGATTCTTACTGGTTGNGGGTAATACAATGC ] [+] EMBL AU165114 [ GGCAGTGTAATTATTAGTGATCAGTTGAATGACTTGTGCGACTGTTTATAGAACTGATGGAATTCTGGGTGCTCCCATACAGGGATTGAGAAAAATGAAGAGTGGGTGAT GGTGG TTGGATTCTTACT GTTGTGGTTAATACAATGCTCTTTGCGCCCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||