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Oryza sativa
cluster # 11012 cluster # 11012       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11012#0 length = 2250 sequences # 7  
consensus_11012#1 length = 623 sequences # 1  

consensusID : consensus_11012#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2250
fasta sequence
                              [AGCCGCACTTAAGCCGTGAGCCGACGAGGGCGGAAAAGGGGAAGGCAAACTACGCAAGGGAAACCCCAACCGAAGCAACAATTAAAAAGAGGGAAGGTGGCCGTGGTGGCCTCGCTGGGATTGGGGGATCAGAGGAAGCAAGGAGATCGAGAGACGCACCCAATCTCCCAATCGCCTCCTCCTCCTCCACCACCTCCTCCTCTCTCCGTCGCCGAAGATTTGCCTTGCCTCCGTCTCTCTCTTTCTCTCCCGATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTACAGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGGAAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCTGTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGATGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTTACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAATGAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATGGAACTAGTGGATACATATAAATAT-CCGCTACCAAAATTCAC-GGTGAAACTAGCAATACAACATATGCGAAAGGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAAGCGGTG-CTTT-GTT-CCTGCTTTGTTTGGACATGCGACTGAAGATGATTTTATACTGCCCCATCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATTAAATTCGATGGGGATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATATTTTTCCATAATGTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCTCATGGAAGCCTTGGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCTCAATCACCAACAGCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGAAGGCTCATGAGTAGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGAAATGAGGTAATGGACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCTCCTAATGGCCGCAATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAGTACTCATTTGATAGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTAATGCAAGCAATTATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAATCTGCCGCATCTGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACCGTGACAGTATTGGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCTCCTGGCAAGGATGTAACAACCTGCA-GTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAGAACGCCAATGGGGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGCAGCCTAATGGATGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGACAAGCAAAAGATATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCCATAGAGCTGCCGCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAATGAGAAAGGAAAAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGTGATCCCATTGATTGTGTACCATGTGTCTCTCACTCAGCACTGCGTTGGATTTGGTGAATTGGCAGGCTTTTGTTACTTGCAAAAAAAAGA]

[+] EMBL CB645291             [AGCCGCACTTAAGCCGTGAGCCGACGAGGGCGGAAAAGGGGAAGGCAAACTACGCAAGGGAAACCCCAACCGAAGCAACAATTAAAAAGAGGGAAGGTGGCCGTGGTGGCCTCGCTGGGATTGGGGGATCAGAGGAAGCAAGGAGATCGAGAGACGCACCCAATCTCCCAATCGCCTCCTCCTCCTCCACCACCTCCTCCTCTCTCCGTCGCCGAAGATTTGCCTTGCCTCCGTCTCTCTCTTTCTCTCCCGATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCATAGCTGAGTACAGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAACGAAGATGGTTTCATAGGAAGGATTTGGAGGTTGTAAATGGCCAGAGCAAGAAATTGCAATGTAGCCACTACATGCCTGCTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGATGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTTACACTGGACTTTTCACGGTCTGGACTCTCTGAAGGATAACATGTTACATTAGGCTGGAATGAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGAGAACATATCTTGCATTGGTCTGTGGGGCCGCTCAATGAGTGCAGTAACAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CA764139             [                                                                                                              agggggGGGATTGGGGGATCAGAGGAAGCAAGGAGATCGAGAGACGCACCCAATCTCCCAATCGCCTCCTCCT         CCTCCTCCTCTCTCCGTCGCCGAAGATTTGCCTTGCCTCCGTCTCTCTCTTTCTCTCCCGATGGACCGGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTACAGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGGAAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCTGTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGATGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTTACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAATGAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCTGGAATGGNTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATGGAACTAGTGGATACATATAAATATNCCGCTACCAAAATTCACGGGNGAAACTAGCAATACAACATATGCGAAAGGGTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGGTACCATTCAGGTAGCAAAGCGGGG CTTTGGTT CCTGCNTTGGTTGGGCATGCCACTGGANATGATTTTNTACTGGCCCATCATTCAna                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB632608             [                                                                                                                                                                                                                                                CTTCCTCTCCCGATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTACAGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGGAAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCTGTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGATGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTTACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAATGAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATGGAACTAGTGGATACCTATAAATAT CCGCTACCAAAATTCAC GGTGAAACTAGCAATACAACATATGCGAAAGGTTGTCAAGAGAAAAGCCACCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAAGCCGTGCCTTT GTTCCCTGCTTTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CB631079             [                                                                                                                                                                                                                                                CTTTCTCTCCCTATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTACAGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGGAAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCTGTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGATGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTTACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAATGAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATGGAACTAGTGGATACATATAAATAT CCGCTACCAAAATTCAC GGTGAAACTAGCAATACAACATATGCGAAAGGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAAGCGGTG CTTT GTT CCTGCTTTGTTTGGACATGCGACTGAAGATGATTTTATACTGCCCCATCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATTAAATTCGATGGGGATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK064512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGTATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGATCCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCTAACCTGGTTGACTTGATGATGGAACTAGTGGATACATATAAATAT CCACTACCAAAATTCAC GGTGAAACTAGCAATACAACATATGCGAAAGGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATTCAGGTAGCAAAGCGGTG CTTT GTT CCTGCTTTGTTTGGACATGCGACTGAAGATGATTTTATACTGCCCCATCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATTAAATTCGATGGGGATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATATTTTTCCATAATGTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCTCATGGAAGCCTTGGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCTCAATCACCAACAGCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGAAGGCTCATGAGTAGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGAAATGAGGTAATGGACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCTCCTAATGGCCGCAATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAGTACTCATTTGATAGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTAATGCAAGCAATTATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAATCTGCCGCATCTGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACCGTGACAGTATTGGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCTCCTGGCAAGGATGTAACAACCTGCA GTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAGAACGCCAATGGGGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGCAGCCTAATGGATGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGACAAGCAAAAGATATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCCATAGAGCTGCCGCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAATGAGAAAGGAAAAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGTGATCCCATTG                                                                                ]
[-] EMBL CB645292             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAATCTGCCGCATCTGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACCGTGACAGTATTGGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCTCCTGGCAAGGATGTAACAACCTGCA GTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAGAACGCCAATGGGGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGCAGCCTAATGGATGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGACAAGCAAAAGATATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCCATAGAGCTGCCGCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAATGAGAAAGGAAAAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGTGATCCCATTGATTGTGTACCATGTGTCTCTCACTCAGCACTGCGTTGGATTTGGTGAATTGGCAGGCTTTTGTTACTTGCAAAAAAAAGA]
[-] EMBL AW069973             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          gGCAGGTACTGAAGCAAAGTCACCTGAAGTGCAAAGTGCAAGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTACGAACGGAAAATCCACATCGgccgcg                                                                                                                                                                                                                                                                                                                                                                                                                        ]


>consensus_11012#0 AGCCGCACTTAAGCCGTGAGCCGACGAGGGCGGAAAAGGGGAAGGCAAACTACGCAAGGG AAACCCCAACCGAAGCAACAATTAAAAAGAGGGAAGGTGGCCGTGGTGGCCTCGCTGGGA TTGGGGGATCAGAGGAAGCAAGGAGATCGAGAGACGCACCCAATCTCCCAATCGCCTCCT CCTCCTCCACCACCTCCTCCTCTCTCCGTCGCCGAAGATTTGCCTTGCCTCCGTCTCTCT CTTTCTCTCCCGATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTAC AGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGG AAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCT GTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGA TGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTT ACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAAT GAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGT ATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGAT CCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATG GAACTAGTGGATACATATAAATATCCGCTACCAAAATTCACGGTGAAACTAGCAATACAA CATATGCGAAAGGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATT CAGGTAGCAAAGCGGTGCTTTGTTCCTGCTTTGTTTGGACATGCGACTGAAGATGATTTT ATACTGCCCCATCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATT AAATTCGATGGGGATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATA TTTTTCCATAATGTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCT CATGGAAGCCTTGGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCT CAATCACCAACAGCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGA AGGCTCATGAGTAGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGA AATGAGGTAATGGACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCT CCTAATGGCCGCAATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAG TACTCATTTGATAGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTA ATGCAAGCAATTATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAA TCTGCCGCATCTGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACC GTGACAGTATTGGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCT CCTGGCAAGGATGTAACAACCTGCAGTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCA AGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAAT GCATCAACCCATGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAG AACGCCAATGGGGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGC AGCCTAATGGATGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGAC AAGCAAAAGATATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCC ATAGAGCTGCCGCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAA TGAGAAAGGAAAAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGT GATCCCATTGATTGTGTACCATGTGTCTCTCACTCAGCACTGCGTTGGATTTGGTGAATT GGCAGGCTTTTGTTACTTGCAAAAAAAAGA



consensusID : consensus_11012#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 623
fasta sequence
                              [AATGGTGCACCCGTGACAGTATTGGAGCCAGATGCTTTTTCCCCCTGGGGGGGTCCCCTTCCCACAGATGTTCCTGGCAAGGATGTAACACCCTGCAGTATTAAAGCAAAGTCCCCTGAAGTGCAAAGTGCAAGCAACCCCCCCCCAAACAACGCCGTTTTTGGGAACCCCTTTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTAGGAACGGAAAATCCCCCTTGTCGGAATTTCAGAAACCAACCCAGAACCCCAATGGGGGGGATGGTACAAGAGCACCCCTGGTGGTACAAAAGAGCCGGACAGGCACCCTAATGGATGGACTGACGCCCAAATGGGGTTCCTTTTTCAAGAACAATGATTAAGCCAAGCAAAAGATATACGATGCCCCCCGTTGACGATTTATGTTATTGGGGGTTAATATACCCATAGAGCTGCCCCCTTTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTTCGTGTAAAAGGGGAAAGGAAAAAGGGATATTCTGTACAAGGGGGGTATATATCCAGTTAGGATGGTAGTGATCCCATTGATTGGGTCCCATGTGTTTTTCACTCAGCCCTGCGTTGCATTTGGTGAATTGGCAGGCTTTT]

[-] EMBL CB631080             [AATGGTGCACCCGTGACAGTATTGGAGCCAGATGCTTTTTCCCCCTGGGGGGGTCCCCTTCCCACAGATGTTCCTGGCAAGGATGTAACACCCTGCAGTATTAAAGCAAAGTCCCCTGAAGTGCAAAGTGCAAGCAACCCCCCCCCAAACAACGCCGTTTTTGGGAACCCCTTTAGTTCCTTAGAGTCCAATGCATCAACCCATGTTAGGAACGGAAAATCCCCCTTGTCGGAATTTCAGAAACCAACCCAGAACCCCAATGGGGGGGATGGTACAAGAGCACCCCTGGTGGTACAAAAGAGCCGGACAGGCACCCTAATGGATGGACTGACGCCCAAATGGGGTTCCTTTTTCAAGAACAATGATTAAGCCAAGCAAAAGATATACGATGCCCCCCGTTGACGATTTATGTTATTGGGGGTTAATATACCCATAGAGCTGCCCCCTTTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTTCGTGTAAAAGGGGAAAGGAAAAAGGGATATTCTGTACAAGGGGGGTATATATCCAGTTAGGATGGTAGTGATCCCATTGATTGGGTCCCATGTGTTTTTCACTCAGCCCTGCGTTGCATTTGGTGAATTGGCAGGCTTTT]


>consensus_11012#1 AATGGTGCACCCGTGACAGTATTGGAGCCAGATGCTTTTTCCCCCTGGGGGGGTCCCCTT CCCACAGATGTTCCTGGCAAGGATGTAACACCCTGCAGTATTAAAGCAAAGTCCCCTGAA GTGCAAAGTGCAAGCAACCCCCCCCCAAACAACGCCGTTTTTGGGAACCCCTTTAGTTCC TTAGAGTCCAATGCATCAACCCATGTTAGGAACGGAAAATCCCCCTTGTCGGAATTTCAG AAACCAACCCAGAACCCCAATGGGGGGGATGGTACAAGAGCACCCCTGGTGGTACAAAAG AGCCGGACAGGCACCCTAATGGATGGACTGACGCCCAAATGGGGTTCCTTTTTCAAGAAC AATGATTAAGCCAAGCAAAAGATATACGATGCCCCCCGTTGACGATTTATGTTATTGGGG GTTAATATACCCATAGAGCTGCCCCCTTTGGCCGCACATGTCCAGCTTGATTGGTTTAAT TTTCGTGTAAAAGGGGAAAGGAAAAAGGGATATTCTGTACAAGGGGGGTATATATCCAGT TAGGATGGTAGTGATCCCATTGATTGGGTCCCATGTGTTTTTCACTCAGCCCTGCGTTGC ATTTGGTGAATTGGCAGGCTTTT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11012#0      AGCCGCACTTAAGCCGTGAGCCGACGAGGGCGGAAAAGGGGAAGGCAAACTACGCAAGGG 60
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AAACCCCAACCGAAGCAACAATTAAAAAGAGGGAAGGTGGCCGTGGTGGCCTCGCTGGGA 120
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      TTGGGGGATCAGAGGAAGCAAGGAGATCGAGAGACGCACCCAATCTCCCAATCGCCTCCT 180
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CCTCCTCCACCACCTCCTCCTCTCTCCGTCGCCGAAGATTTGCCTTGCCTCCGTCTCTCT 240
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CTTTCTCTCCCGATGGACCAGCTCGTCAATTTCATCATCCGCCCGCCCAGAGCTGAGTAC 300
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AGTCCAAATGATGATCTATTGGAGCAGGAATTCATGTTGAAAGGAAGATGGTTTCAGAGG 360
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AAGGATTTGGAGGTTGTAAATGGCCAGGGCAAGAAATTGCAATGTAGCCACTACATGCCT 420
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      GTTGTGATTCCTGAAGGAAAAGCTCTTCCTTGTGTTATATACTGTCATGGAAACAGTGGA 480
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      TGCAGAGCCGATGCTAGTGAAGCCGCAATTATTCTTCTACCATCAAATATTACAGTCTTT 540
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      ACACTGGACTTTTCAGGGTCTGGACTCTCTGAAGGAGAACATGTTACATTAGGCTGGAAT 600
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      GAAAGAGAAGATCTGAAAGCTGTTGTCAATCATTTGCGGACAGATGGGAACATATCTTGT 660
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      ATTGGTCTGTGGGGCCGCTCAATGGGTGCAGTAACAAGTCTGATGTATGGAGCAGAGGAT 720
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CCATCAATTGCTGGAATGGTTCTTGACAGTCCATTTTCGAACCTGGTTGACTTGATGATG 780
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      GAACTAGTGGATACATATAAATATCCGCTACCAAAATTCACGGTGAAACTAGCAATACAA 840
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CATATGCGAAAGGTTGTCAAGAGAAAAGCCAGCTTTGACATCATGGAACTTGATACCATT 900
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CAGGTAGCAAAGCGGTGCTTTGTTCCTGCTTTGTTTGGACATGCGACTGAAGATGATTTT 960
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      ATACTGCCCCATCATTCAGACAAAATCTATGAATCCTATGTTGGAGACAAAAACATTATT 1020
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AAATTCGATGGGGATCACAATTCACCCCGTCCACAATTTTACTTTGATTCCATAACAATA 1080
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      TTTTTCCATAATGTGCTAAACCCTCCTGATGTTCCTGATGACCATTATTTCCTGACACCT 1140
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CATGGAAGCCTTGGTCAGGGTCATTGGGATACAGAACATGACATAGAGTATAGGTTCGCT 1200
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CAATCACCAACAGCCCGCACAGCTACCACAGAAGATGCCATTGCGCAGTTACGTTCTAGA 1260
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AGGCTCATGAGTAGAATGGAGGTCCCAACTGGTGCCACTGCAGAAGACAGGGCTGACAGA 1320
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      AATGAGGTAATGGACAGTGATAATGGTCCTTCCTCTTCTAGTGTATCTACTGCAACTCCT 1380
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      CCTAATGGCCGCAATGGAAGGCTCCTGACTCCAACCTCTGATGATGGCGAGTATGTGGAG 1440
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      TACTCATTTGATAGTCTATCAGATATGCCCTACACTGAGGAAGATGAGGATAGAATGCTA 1500
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      ATGCAAGCAATTATGGAGTCCTTGAAGGATCTTGAACTGTCAAATACAAAAGCTGCGCAA 1560
consensus_11012#1      ------------------------------------------------------------
                                                                                   

consensus_11012#0      TCTGCCGCATCTGATGCTGCATCCAAAGAAAATAAAGAAAATGGTTGCAATGGTGCAACC 1620
consensus_11012#1      ------------------------------------------------AATGGTGCACCC 12
                                                                       ********* **

consensus_11012#0      GTGACAGTATTGGAGCCAGATGCATCTTCCACCTCGGCGCGTCCCACTCCCACAGATGCT 1680
consensus_11012#1      GTGACAGTATTGGAGCCAGATGCTTTTTCCCCCTGGGGGGGTCCCCTTCCCACAGATGTT 72
                       *********************** * **** *** ** * *****  *********** *

consensus_11012#0      CCTGGCAAGGATGTAACAACCTGCAGTACTAAAGCAAAGTCACCTGAAGTGCAAAGTGCA 1740
consensus_11012#1      CCTGGCAAGGATGTAACACCCTGCAGTATTAAAGCAAAGTCCCCTGAAGTGCAAAGTGCA 132
                       ****************** ********* ************ ******************

consensus_11012#0      AGCAACCACACCACAAACAACGCCGCTTCTGTGAACACCTCTAGTTCCTTAGAGTCCAAT 1800
consensus_11012#1      AGCAACCCCCCCCCAAACAACGCCGTTTTTGGGAACCCCTTTAGTTCCTTAGAGTCCAAT 192
                       ******* * ** ************ ** ** **** *** *******************

consensus_11012#0      GCATCAACCCATGTTACGAACGGAAAATCCACCTCGTCGGAATCTCAGAAACCAACACAG 1860
consensus_11012#1      GCATCAACCCATGTTAGGAACGGAAAATCCCCCTTGTCGGAATTTCAGAAACCAACCCAG 252
                       **************** ************* *** ******** ************ ***

consensus_11012#0      AACGCCAATGGGGAGGATGGTACAAGAGCAACCCTGGTGGTACAGAAGAGCCGGACAGGC 1920
consensus_11012#1      AACCCCAATGGGGGGGATGGTACAAGAGCACCCCTGGTGGTACAAAAGAGCCGGACAGGC 312
                       *** ********* **************** ************* ***************

consensus_11012#0      AGCCTAATGGATGGACTGACGCACAAATGGGGTTCCTTGTTCAAGAACAATGACTAAGAC 1980
consensus_11012#1      ACCCTAATGGATGGACTGACGCCCAAATGGGGTTCCTTTTTCAAGAACAATGATTAAGCC 372
                       * ******************** *************** ************** **** *

consensus_11012#0      AAGCAAAAGATATACGATGACGCCCGTTGACGATTTATGTTATTGTGTGTTAATATAGCC 2040
consensus_11012#1      AAGCAAAAGATATACGATGCCCCCCGTTGACGATTTATGTTATTGGGGGTTAATATACCC 432
                       ******************* * *********************** * ********* **

consensus_11012#0      ATAGAGCTGCCGCCTCTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTACGTGTAAAA 2100
consensus_11012#1      ATAGAGCTGCCCCCTTTGGCCGCACATGTCCAGCTTGATTGGTTTAATTTTCGTGTAAAA 492
                       *********** *** ********************************** *********

consensus_11012#0      TGAGAAAGGAAAAAGGGATATACTGTACAAGTGGTGTATATATACAGCTAGGATGGTAGT 2160
consensus_11012#1      GGGGAAAGGAAAAAGGGATATTCTGTACAAGGGGGGTATATATCCAGTTAGGATGGTAGT 552
                        * ****************** ********* ** ******** *** ************

consensus_11012#0      GATCCCATTGATTGTGTACCATGTGTCTCTCACTCAGCACTGCGTTGGATTTGGTGAATT 2220
consensus_11012#1      GATCCCATTGATTGGGTCCCATGTGTTTTTCACTCAGCCCTGCGTTGCATTTGGTGAATT 612
                       ************** ** ******** * ********* ******** ************

consensus_11012#0      GGCAGGCTTTTGTTACTTGCAAAAAAAAGA 2250
consensus_11012#1      GGCAGGCTTTT------------------- 623
                       ***********                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)