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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1957 fasta sequence
[GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCCTCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGAGTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCCTTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCTACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGCAAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAATTTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACATATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAACTACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACAATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGATTCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATCGTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGATCGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGATTGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTTTCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAGAACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA-CAGCATCAGAAGACGGCGGGTCATCGTTGA-CTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG-AATAAGCTCTTACA-GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC-ATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGAT-ANC-TAATAGATTTTACTTAAATGAAAAAAAA]
[+] EMBL AK064472 [GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCCTCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGAGTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCCTTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCTACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGCAAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAATTTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACATATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAACTACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACAATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGATTCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATCGTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGATCGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGATTGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTTTCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAGAACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA CAGCATCAGAAGACGGCGGGTCATCGTTGA CTGTCCAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG AATAAGCTCTTACA GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC ATGAATACATTGTCCA ]
[+] EMBL BM419167 [ ccGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACCAGCATCAGAAGACGGCGGGTCATCGTTGACCTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGGNACTAAGCTCTTACACGTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC ATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGAT ANC TAATAGATTTTACTTAAATGAAAAAAAA]
[+] EMBL BM419284 [ TGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA CAGCATCAGAAGACGGCGGGTCATCGTTGA CTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG AATAAGCTCTTACA GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTCGATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGATCAGCTTAATAGATTTTACTTAAATGAAAAAAAA]
consensusID : consensus_11013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1421 fasta sequence
[ACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGGCGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATTCCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGAACTCGATCTGCAGCCGGCGGTGCGGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCCAAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCCGGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGGAGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGGTAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACGTCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAACGACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTGTCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGCCTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAGC]
[+] EMBL AK110899 [ACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGGCGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATTCCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGAACTCGATCTGCAGCCGGCGGTGCGGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCCAAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCCGGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGGAGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGGTAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACGTCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAACGACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTGTCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGCCTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAGC]
consensusID : consensus_11013#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 958 fasta sequence
[GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC-GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAAAAAAACAGAGTTCATGGTTTGTCTTACCTTTTTTTGTTTGGAGGCAGGAATAGGGTCCATTTCATCTCACCTGTCAAAGCCATTTTGTAAGCATGCCCAGGACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC]
[+] EMBL AK058353 [GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAAAAAAACAGAGTTCATGGTTTGTCTTACCTTTTTTTGTTTGGAGGCAGGAATAGGGTCCATTTCATCTCACCTGTCAAAGCCATTTTGTAAGCATGCCCAGGACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC]
[+] EMBL AK071994 [GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAA ]
[+] EMBL AU098333 [ nACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCNTCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAA GGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAA ]
[+] EMBL AU172446 [ TTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATNGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATACNGGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAA ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11013#0 GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCC 60
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGA 120
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 GTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCC 180
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCT 240
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGC 300
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 AAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAAT 360
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACA 420
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAAC 480
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACA 540
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAA 600
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 GATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGAT 660
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATC 720
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 GTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGAT 780
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 CGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGAT 840
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTT 900
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 TCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAG 960
consensus_11013#1 ------------------------------------------------------------
consensus_11013#2 ---------------------------------------------GGCTCGTCGGAGTGG 15
consensus_11013#0 AACTGGGATCATATCAGCGGAGAGGCC---GAGCCATCCAAAACCATGCACAT--AACTT 1015
consensus_11013#1 -ACTGGGATCATATCAGCGGAGAGGCC---GAGCCATCCAAAACCATGCACAT--AACTT 54
consensus_11013#2 AGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTG 75
** * ** * * * * * * * * * ** **** * * **
consensus_11013#0 CAGATGA-ACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAG-TACATC 1073
consensus_11013#1 CAGATGA-ACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAG-TACATC 112
consensus_11013#2 GAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTC 135
*** * * * * * ** * ** * * * *** * * * **
consensus_11013#0 TGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGG 1133
consensus_11013#1 TGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGG 172
consensus_11013#2 GGCTTCTTCCAGCCCG--AGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACA 193
* * ** * ** * *** * ** ** * * **** * **
consensus_11013#0 TTTGTCAGAGCACAGGAATGGTCAC-AATGATGAGCTAGATT---CTTATAT-TACTTCC 1188
consensus_11013#1 TTTGTCAGAGCACAGGAATGGTCAC-AATGATGAGCTAGATT---CTTATAT-TACTTCC 227
consensus_11013#2 TCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCG 253
* ** * * * * * * * **** * * * * *** **
consensus_11013#0 TTTGTCCAAATG-TCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAAT 1247
consensus_11013#1 TTTGTCCAAATG-TCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAAT 286
consensus_11013#2 TGAGCTGGAACGACCACTTCTTCGTGCTCA--AGGTGGAAGGCGACTGCTACCACGTCGT 311
* * ** * ** * * ** * ** *** * *** * * * *
consensus_11013#0 CTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTG 1307
consensus_11013#1 CTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTG 346
consensus_11013#2 GGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTAC-ATGCTCCGGTTCG 370
* ** * ** * ** * * ** * * * ** *** * *
consensus_11013#0 -TACAGGCCCAGAACCGGAATC--TGCTGCTAATTCTGAACTTCCGCGCAACCTGATATT 1364
consensus_11013#1 -TACAGGCCCAGAACCGGAATC--TGCTGCTAATTCTGAACTTCCGCGCAACCTGATATT 403
consensus_11013#2 ACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGT-CGTCGCCGTCGCCGGAGGAG 429
* * ** * ** ** ** * * * ** ** ** **
consensus_11013#0 CAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCC 1424
consensus_11013#1 CAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCC 463
consensus_11013#2 GAGGTG-ATCGTCAC------CGGGAAGGAGTGCTGCAG-GGAGTTCATCAAGAGGTTCT 481
* ** ** * *** * * ** * ** * * * ** **
consensus_11013#0 TAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAA 1484
consensus_11013#1 TAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAA 523
consensus_11013#2 TGGC--GGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGC 539
* * ** * *** * * *** * * **** ** **
consensus_11013#0 CCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGC 1544
consensus_11013#1 CCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGC 583
consensus_11013#2 GCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAG- 598
* ** * * * ** *** ** * *** * ** * * ** **
consensus_11013#0 TCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGG 1604
consensus_11013#1 TCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGG 643
consensus_11013#2 ---------------ACCAAGCAAG---AAGATGATGATGATCA-GTGGTTGTAGCT--- 636
* ******* * * * *** ** ** * *
consensus_11013#0 CTTCCAGCAGACGAAGAGGCGGTGCCTG-GTTGCTTGATGTCGAGAAGAATTGATGAATC 1663
consensus_11013#1 CTTCCAGCAGACGAAGAGGCGGTGCCTG-GTTGCTTGATGTCGAGAAGAATTGATGAATC 702
consensus_11013#2 CTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACA 696
** * *** *** * ** * * *** * * * * *** * *
consensus_11013#0 CATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGG 1723
consensus_11013#1 CATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGG 762
consensus_11013#2 TATACAGTACAAGAGGAACAGGAAATCACA---GCATTGAT-----ACATACGGATACTA 748
*** ** * * **** * ** * *** *** * * **
consensus_11013#0 CGGGTCATCGTTGACTGTCTAGCTCTCTTCTAAACTGTGT--------ATAAACTCTTTA 1775
consensus_11013#1 CGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATT 822
consensus_11013#2 CAGGG-ATTTTTGGATAGTAAATATTATTGTAGGCAGACAC-------AGGAAATTTTTA 800
* ** ** *** * * * ** ** * * * * * *
consensus_11013#0 GAGGAATAAGCTCTTACAGTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGG 1835
consensus_11013#1 CCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGA--ACTCGATCTGCAGCCGGCGGTGC 880
consensus_11013#2 CAGAAA-AAAAAAACAGAGTTCATGGTTTGTCTTA--CCTTTTTTTGTTTGGAGGCAGGA 857
* * ** * ** * ** * *
consensus_11013#0 AG-GAATCGACATTCCAGTTGTAGTTAATAAT-AACGATTCCTACAGTC--ATGAATAC- 1890
consensus_11013#1 GGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCC 940
consensus_11013#2 ATAGGGTC--CATTTCA-TCTCACCTGTCAA--AGCCATTTTGTAAGC---ATGCCCAG- 908
* ** * * * * * * ** ***
consensus_11013#0 ---ATTGTCCAGTTGA--TTCACAGAGAACACCATCTTGATANCTAATAGATTTTACTTA 1945
consensus_11013#1 AAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCC 1000
consensus_11013#2 --GACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC-------- 958
* * * * ** * *
consensus_11013#0 AATGAAAAAAAA------------------------------------------------ 1957
consensus_11013#1 GGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGG 1060
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 AGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGG 1120
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 TAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACG 1180
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 TCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAAC 1240
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 GACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTG 1300
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 TCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGC 1360
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 ------------------------------------------------------------
consensus_11013#1 CTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAG 1420
consensus_11013#2 ------------------------------------------------------------
consensus_11013#0 -
consensus_11013#1 C 1421
consensus_11013#2 -
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||