These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11013#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1957 fasta sequence [GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCCTCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGAGTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCCTTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCTACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGCAAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAATTTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACATATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAACTACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACAATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGATTCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATCGTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGATCGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGATTGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTTTCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAGAACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA-CAGCATCAGAAGACGGCGGGTCATCGTTGA-CTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG-AATAAGCTCTTACA-GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC-ATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGAT-ANC-TAATAGATTTTACTTAAATGAAAAAAAA] [+] EMBL AK064472 [GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCCTCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGAGTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCCTTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCTACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGCAAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAATTTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACATATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAACTACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACAATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGATTCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATCGTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGATCGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGATTGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTTTCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAGAACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA CAGCATCAGAAGACGGCGGGTCATCGTTGA CTGTCCAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG AATAAGCTCTTACA GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC ATGAATACATTGTCCA ] [+] EMBL BM419167 [ ccGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACCAGCATCAGAAGACGGCGGGTCATCGTTGACCTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGGNACTAAGCTCTTACACGTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTC ATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGAT ANC TAATAGATTTTACTTAAATGAAAAAAAA] [+] EMBL BM419284 [ TGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTA CAGCATCAGAAGACGGCGGGTCATCGTTGA CTGTCTAGCTCTCTTCTAAACTGTGTATAAACTCTTTAGAGG AATAAGCTCTTACA GTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGGAGGAATCGACATTCCAGTTGTAGTTAATAATAACGATTCCTACAGTCGATGAATACATTGTCCAGTTGATTCACAGAGAACACCATCTTGATCAGCTTAATAGATTTTACTTAAATGAAAAAAAA] consensusID : consensus_11013#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1421 fasta sequence [ACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGGCGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATTCCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGAACTCGATCTGCAGCCGGCGGTGCGGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCCAAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCCGGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGGAGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGGTAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACGTCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAACGACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTGTCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGCCTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAGC] [+] EMBL AK110899 [ACTGGGATCATATCAGCGGAGAGGCCGAGCCATCCAAAACCATGCACATAACTTCAGATGAACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAGTACATCTGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGGTTTGTCAGAGCACAGGAATGGTCACAATGATGAGCTAGATTCTTATATTACTTCCTTTGTCCAAATGTCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAATCTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTGTACAGGCCCAGAACCGGAATCTGCTGCTAATTCTGAACTTCCGCGCAACCTGATATTCAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCCTAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAACCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGCTCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGGCTTCCAGCAGACGAAGAGGCGGTGCCTGGTTGCTTGATGTCGAGAAGAATTGATGAATCCATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGGCGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATTCCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGAACTCGATCTGCAGCCGGCGGTGCGGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCCAAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCCGGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGGAGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGGTAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACGTCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAACGACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTGTCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGCCTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAGC] consensusID : consensus_11013#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 958 fasta sequence [GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC-GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAAAAAAACAGAGTTCATGGTTTGTCTTACCTTTTTTTGTTTGGAGGCAGGAATAGGGTCCATTTCATCTCACCTGTCAAAGCCATTTTGTAAGCATGCCCAGGACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC] [+] EMBL AK058353 [GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAAAAAAACAGAGTTCATGGTTTGTCTTACCTTTTTTTGTTTGGAGGCAGGAATAGGGTCCATTTCATCTCACCTGTCAAAGCCATTTTGTAAGCATGCCCAGGACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC] [+] EMBL AK071994 [GGCTCGTCGGAGTGGAGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTGGAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTCGGCTTCTTCCAGCCCGAGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACATCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCGTGAGCTGGAACGACCACTTCTTCGTGCTCAAGGTGGAAGGCGACTGCTACCACGTCGTGGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAA ] [+] EMBL AU098333 [ nACAAGGCGTACATGCTCCGGTTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATCGTCACCGGGAAGGAGTGCTGCAGGGAGTTCNTCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAA GGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATAC GGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAA ] [+] EMBL AU172446 [ TTCGACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGTCGTCGCCGTCGCCGGAGGAGGAGGTGATNGTCACCGGGAAGGAGTGCTGCAGGGAGTTCATCAAGAGGTTCTTGGCGGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGCGCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAGACCAAGCAAGAAGATGATGATGATCAGTGGTTGTAGCTCTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACATATACAGTACAAGAGGAACAGGAAATCACAGCATTGATACATACNGGATACTACAGGGATTTTTGGATAGTAAATATTATTGTAGGCAGACACAGGAAATTTTTACAGAAAAA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11013#0 GAGGAAGGTCCTTCAGTTAAGAGATCCAAACAAGGGAAGCAAGTTGGTGAATGCAGTGCC 60 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TCCAAGACAAGGAATAAAAGGAGAAAGAAGTTAATAGCTGAAGAGGTGCCTACTGAAGGA 120 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 GTCACTTCTAATCATTTAGATTTGCCAGAAGAGCGTCAAGTTGATGCCACTGAGTGCGCC 180 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TTGAATTCTGATCTGGAAAGGGGAACAGTTGATTTACCTGAATCAACTGCAAATATTTCT 240 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ACCAAAATCCCTGATTTGCCATCACAATTAAAACCTGAGATAAATATGTCGAGAAGGAGC 300 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 AAAAGAAAATCCAAAAGTCCTTGTGGTTCTAAGTATGTCGTTTGCAATGGAGCAGATAAT 360 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TTACAGGCTAGGAGATTGCAGCATTGCTTGTCATCTGAGTCACTTCGTAGATGGTGTACA 420 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TATGAGTGGTTTTACAGCGCAGTTGATTATCCATGGTTTATGGATAATGAGTTTGTGAAC 480 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TACTTGAATTTTGCGAATTTGAGCCATCTGTCAAGGCTCACTCGGTCCGAGTGGAGCACA 540 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ATAAGGAGCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAA 600 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 GATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTACTAAGTGAAGAT 660 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TCGTGGGATTCTCTACCACCAGACCTAGCTCGACCATTTTCAATTGGTCAGCAGGTAATC 720 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 GTTCGTCACCCAAGTACGCGGGAACTTTGTGATGGTAAAGTGGTGATGATGGAACAGGAT 780 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 CGTTATAATGTCCAGTTTGATAGGCCTGACCTTGGTGTTGATGAAGTAAAGGACACTGAT 840 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TGTATGCCTGTAAACTGGTTGGATAATCTGCCTGATGACCTCAAAAAGAGGAGCTTCCTT 900 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 TCAAATAATTCACACAACAGAGTAGAGGTTGAGCAAATTCCAAAGTTTACTTCAAAAGAG 960 consensus_11013#1 ------------------------------------------------------------ consensus_11013#2 ---------------------------------------------GGCTCGTCGGAGTGG 15 consensus_11013#0 AACTGGGATCATATCAGCGGAGAGGCC---GAGCCATCCAAAACCATGCACAT--AACTT 1015 consensus_11013#1 -ACTGGGATCATATCAGCGGAGAGGCC---GAGCCATCCAAAACCATGCACAT--AACTT 54 consensus_11013#2 AGGCGGCTCTGCGACGACGAGGCGCACATGGCGGCGTTCCCGAACAGGCACTTCGACCTG 75 ** * ** * * * * * * * * * ** **** * * ** consensus_11013#0 CAGATGA-ACAGGTTGAAATCGCTGTGGATATTGAAAGACTATCCAACAAGAG-TACATC 1073 consensus_11013#1 CAGATGA-ACAGGTTGAAATTGCTGTGGATATTGAAAGACTATCCAACAAGAG-TACATC 112 consensus_11013#2 GAGACGGTGCTCGCGGCGAGGGCGAGGCCCATCGCCGTGCAGCACGACAGGGCCTTCGTC 135 *** * * * * * ** * ** * * * *** * * * ** consensus_11013#0 TGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGG 1133 consensus_11013#1 TGGTAATTGTGGACCATTACAGCCGCTCCAGTCTGTTGATGACAATGTACGGAGTAGAGG 172 consensus_11013#2 GGCTTCTTCCAGCCCG--AGAGCTTCGCCTCCCTCTCCGGCGCCATGTCGTTCGACGACA 193 * * ** * ** * *** * ** ** * * **** * ** consensus_11013#0 TTTGTCAGAGCACAGGAATGGTCAC-AATGATGAGCTAGATT---CTTATAT-TACTTCC 1188 consensus_11013#1 TTTGTCAGAGCACAGGAATGGTCAC-AATGATGAGCTAGATT---CTTATAT-TACTTCC 227 consensus_11013#2 TCTGGCGAGAGATCGCCGCCGCCGCCGGCGGCGAGCCGGGGCGCGCCGACGTGTACATCG 253 * ** * * * * * * * **** * * * * *** ** consensus_11013#0 TTTGTCCAAATG-TCATTGGCACAAGCCAAGCAGATGGTCGACGAAGCCATGAAGGAAAT 1247 consensus_11013#1 TTTGTCCAAATG-TCATTGGCACAAGCCAAGCAGATGGTTGACGAAGCCATGAAGGAAAT 286 consensus_11013#2 TGAGCTGGAACGACCACTTCTTCGTGCTCA--AGGTGGAAGGCGACTGCTACCACGTCGT 311 * * ** * ** * * ** * ** *** * *** * * * * consensus_11013#0 CTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTG 1307 consensus_11013#1 CTCTGAGAATGGTAAAAGTTCTCTAGAAGAAACAGGCATATCAAATGAAGCGACGGATTG 346 consensus_11013#2 GGACACGCTCGGCGAGAGGCTCTTCGAGGGCTGCGACAAGGCGTAC-ATGCTCCGGTTCG 370 * ** * ** * ** * * ** * * * ** *** * * consensus_11013#0 -TACAGGCCCAGAACCGGAATC--TGCTGCTAATTCTGAACTTCCGCGCAACCTGATATT 1364 consensus_11013#1 -TACAGGCCCAGAACCGGAATC--TGCTGCTAATTCTGAACTTCCGCGCAACCTGATATT 403 consensus_11013#2 ACGCCACGTCGGAGATGCGCTCGGTGTCGCCGCCGCCGT-CGTCGCCGTCGCCGGAGGAG 429 * * ** * ** ** ** * * * ** ** ** ** consensus_11013#0 CAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCC 1424 consensus_11013#1 CAACTGCATTGCCACGCTTCTTGCAATCAAGCATTTTAGCGAGGGCCGACATCCACCTCC 463 consensus_11013#2 GAGGTG-ATCGTCAC------CGGGAAGGAGTGCTGCAG-GGAGTTCATCAAGAGGTTCT 481 * ** ** * *** * * ** * ** * * * ** ** consensus_11013#0 TAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAA 1484 consensus_11013#1 TAACATAGCAGGCGTCCTGGAGCGTGCTTGCTTAATGCTGCGACCAAGCTGTGCAGAGAA 523 consensus_11013#2 TGGC--GGCCATCCCGCTGAGGGAGGAGCTGGAGATGGAGAGGAAGGGCTGCGCCGACGC 539 * * ** * *** * * *** * * **** ** ** consensus_11013#0 CCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGC 1544 consensus_11013#1 CCTGCCCATCTATAACGAAATAGAGAATTTTATCGCTGTCATAAAGAACCAGATACTAGC 583 consensus_11013#2 GCCGCACCGCCGGCTGCAGATCGAGTTCCACTTCACCGTCCTGAAAGAAGAAGAACAAG- 598 * ** * * * ** *** ** * *** * ** * * ** ** consensus_11013#0 TCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGG 1604 consensus_11013#1 TCTTGTGCCATCGGCATCAAGCAATGCCAGGCTACCCATGTACATGTAAATACTTCCAGG 643 consensus_11013#2 ---------------ACCAAGCAAG---AAGATGATGATGATCA-GTGGTTGTAGCT--- 636 * ******* * * * *** ** ** * * consensus_11013#0 CTTCCAGCAGACGAAGAGGCGGTGCCTG-GTTGCTTGATGTCGAGAAGAATTGATGAATC 1663 consensus_11013#1 CTTCCAGCAGACGAAGAGGCGGTGCCTG-GTTGCTTGATGTCGAGAAGAATTGATGAATC 702 consensus_11013#2 CTGCAAGCTGACTCAAAGCTGTAGTCTGTACTAACAAACATTCATGTACATTTCTATACA 696 ** * *** *** * ** * * *** * * * * *** * * consensus_11013#0 CATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGG 1723 consensus_11013#1 CATAGCGTCTGGGGGAGGTTTGAAAATGTATGAGCTTGGATCTACAGCATCAGAAGACGG 762 consensus_11013#2 TATACAGTACAAGAGGAACAGGAAATCACA---GCATTGAT-----ACATACGGATACTA 748 *** ** * * **** * ** * *** *** * * ** consensus_11013#0 CGGGTCATCGTTGACTGTCTAGCTCTCTTCTAAACTGTGT--------ATAAACTCTTTA 1775 consensus_11013#1 CGGGTCATCGTTGACTGTCCAGCTCTCTTCTAAACTGTGTGAGATGAAATGGACCCTATT 822 consensus_11013#2 CAGGG-ATTTTTGGATAGTAAATATTATTGTAGGCAGACAC-------AGGAAATTTTTA 800 * ** ** *** * * * ** ** * * * * * * consensus_11013#0 GAGGAATAAGCTCTTACAGTTTTTAGTTTCATAGATTTCTCAATATGGTTTTAGGAATGG 1835 consensus_11013#1 CCTGCCTCCAAACAAAAAAAGGACGGTGAAGTGGA--ACTCGATCTGCAGCCGGCGGTGC 880 consensus_11013#2 CAGAAA-AAAAAAACAGAGTTCATGGTTTGTCTTA--CCTTTTTTTGTTTGGAGGCAGGA 857 * * ** * ** * ** * * consensus_11013#0 AG-GAATCGACATTCCAGTTGTAGTTAATAAT-AACGATTCCTACAGTC--ATGAATAC- 1890 consensus_11013#1 GGCGCGTCGGCGCAGCCCTTCCTCTCCATCTCCAGCTCCTCCCTCAGCGGGATGGCCGCC 940 consensus_11013#2 ATAGGGTC--CATTTCA-TCTCACCTGTCAA--AGCCATTTTGTAAGC---ATGCCCAG- 908 * ** * * * * * * ** *** consensus_11013#0 ---ATTGTCCAGTTGA--TTCACAGAGAACACCATCTTGATANCTAATAGATTTTACTTA 1945 consensus_11013#1 AAGAACCTCTTGATGAACTCCCTGCAGCACTCCTTCCCGGTGACGATCACCTCCTCCTCC 1000 consensus_11013#2 --GACTCACTGCACATTATTTACATATAGTAAAATCTAGGGGCTTATTTGAC-------- 958 * * * * ** * * consensus_11013#0 AATGAAAAAAAA------------------------------------------------ 1957 consensus_11013#1 GGCGACGGCGACGACGGCGGCGGCGACACCGAGCGCATCTCCGACGTGGCGTCGAACCGG 1060 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 AGCATGTACGCCTTGTCGCAGCCCTCGAAGAGCCTCTCGCCGAGCGTGTCCACGACGTGG 1120 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 TAGCAGTCGCCTTCCACCTTGAGCACGAAGAAGTGGTCGTTCCAGCTCACGATGTACACG 1180 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 TCGGCGCGCCCCGGCTCGCCGCCGGCGGCGGCGGCGATCTCTCGCCAGATGTCGTCGAAC 1240 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 GACATGGCGCCGGAGAGGGAGGCGAAGCTCTCGGGCTGGAAGAAGCCGACGAAGGCCCTG 1300 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 TCGTGCTGCACGGCGATGGGCCTCGCCCTCGCCGCGAGCACCGTCTCCAGGTCGAAGTGC 1360 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 ------------------------------------------------------------ consensus_11013#1 CTGTTCGGGAACGCCGCCATGTGCGCCTCGTCGTCGCAGAGCCGCCTCCACTCCGACGAG 1420 consensus_11013#2 ------------------------------------------------------------ consensus_11013#0 - consensus_11013#1 C 1421 consensus_11013#2 - |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||