cluster # 11016

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Oryza sativa
cluster # 11016 cluster # 11016 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11016#0 length = 1783 sequences # 5

consensus_11016#1 length = 719 sequences # 2
consensus_11016#2 length = 447 sequences # 1

consensusID : consensus_11016#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1783
fasta sequence

                              [TCAAATTCCCCATTCTTCCTCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCTCCTCCTCATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGATGATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTTCCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACTGTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCCAACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCAGGCCCGGGCGCCTCCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTCCGCAACGAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATGCCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGCTGGAAATCCACAGCTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCCCATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATC-GGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACATCACCGTTGTCGTGCAGGACTCTGTTCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGTCCCGGTGATCGGCCACCTCCTCGACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTACTACTGGAAGGCTAACATATGGAGCATGCCGATACCAGTTGGTTCATGGGAGGATTGGCAGATGGAGTGCACGGTGGATGTCACTGACATCGCCGTCGACAATGTCAGGTTCAGTGAGCTGCTGCCAAAGATTGGCAATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCCTAAAAAAAAAAAAAAAAAA]

[+] EMBL CK085097             [TCAAATTCCCCATTCTTCCTCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCTCCTCCTCATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGATGATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTTCCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCGTCCACTGCCCCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK072590             [                   TCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCTCCTCCTCATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGATGATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTTCCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACTGTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCCAACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCAGGCCCGGGCGCCTCCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTCCGCAACGAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATGCCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGCTGGAAATCCACAGCTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCCCATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATC GGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACATCACCGTTGTCGTGCAGGACTCTGTTCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGTCCCGGTGATCGGCCACCTCCTCGACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTACTACTGGAAGGCTAACATATGGAGCATGCCGATACCAGTTGGTTCATGGGAGGATTGGCAGATGGAGTGCACGGTGGATGTCACTGACATCGCCGTCGACAATGTCAGGTTCAGTGAGCTGCTGCCAAAGATTGGCAATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGC                             ]
[+] EMBL CB627043             [                                                                   ATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGATGATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTTCCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACTGTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCCAACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCAGGCCCGGGCGCCTCCTTGCTCCGGCTGCTACCGAACCCGCGGGTCTCCCCCTTCCGCAACGAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATGCCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGCTGGAAATCCACAGCTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCCCATCCCTG  ACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATCGGGCTGGGTGGATCTCTGGAGAGGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB636919             [                                                                                                                                                                        CCCTTGCTGTTTCCG CGCCGCTGCCGGCCGACTACTACGCCACCGGCGGCGTGAGCCCAAGCTGGGTGTACCTCGAAGACACAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCCACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTCTCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACTGTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCCAACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCAGGCCCGGGCGCCTCCTTGCTCCGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU197387             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCCTAAAAAAAAAAAAAAAAAA]




>consensus_11016#0
TCAAATTCCCCATTCTTCCTCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCT
CCTCCTCATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGAT
GATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTT
CCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTAC
CTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCC
ACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTC
TCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACT
GTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCC
AACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCA
GGCCCGGGCGCCTCCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTCCGCAAC
GAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATG
CCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGC
TGGAAATCCACAGCTGTGTCCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCCCATC
CCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGC
ACCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAA
CACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTC
TGCAGAGGGCCGCCGCATCATTACCGGGACATCACCGTTGTCGTGCAGGACTCTGTTCCC
ACCTGCATCAAGTACGTTGAGATGGTGACCCGTCCCGGTGATCGGCCACCTCCTCGACAA
CGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTAC
TACTGGAAGGCTAACATATGGAGCATGCCGATACCAGTTGGTTCATGGGAGGATTGGCAG
ATGGAGTGCACGGTGGATGTCACTGACATCGCCGTCGACAATGTCAGGTTCAGTGAGCTG
CTGCCAAAGATTGGCAATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCC
ACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGAT
AAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTT
GATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATAT
CTTATCAAGGCTACAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTC
TCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAA
TGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCA
GAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATC
CCAAGTTAAACTGCTATCTTCCCCTAAAAAAAAAAAAAAAAAA

consensusID : consensus_11016#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 719
fasta sequence

                              [ATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTTTGTTTTATAACTGTTGCACCATAATAGTCAAATAATCTAATGGATAGTTCATAACCTTCTTCATTTTGACTACTGTTTACAAGTTGTCAGGTTAGAAACTTGATTCATGAGTGTGTTTTTCAGAGTGCACTCCTAGGATTTGTTTTTGAAGTGCCACTTAAACCCTCTCTGTGTATGTTGTGTGTTTGATGCAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCCTGATGATTGGCCTGAAATGGAGGCTCAGGAATTT]

[-] EMBL CB627044             [ATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTTTGTTTTATAACTGTTGCACCATAATAGTCAAATAATCTAATGGATAGTTCATAACCTTCTTCATTTTGACTACTGTTTACAAGTTGTCAGGTTAGAAACTTGATTCATGAGTGTGTTTTTCAGAGTGCACTCCTAGGATTTGTTTTTGAAGTGCCACTTAAACCCTCTCTGTGTATGTTGTGTGTTTGATGCAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCCTGATGATTGGCCTGAAATGGAGGCTCAGGAATTT]
[-] EMBL CB636920             [                                                                                                                                                                                                                  AGATCTCCAAATATCTTATCAAGGCTACAGGTTTGTTTTATAACTGTTGCACCATAATAGTCAAATAATCTAATGGATAGTTCATAACCTTCTTCATTTTGACTACTGTTTACAAGTTGTCAGGTTAGAAACTTGATTCATGAGTGTGTTTTTCAGAGTGCACTCCTAGGATTTGTTTTTGAAGTGCCACTTAAACCCTCTCTGTGTATGTTGTGTGTTTGATGCAGGTGAGGCAGGAACTCTTGTAAAAAATGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAAAAAAAAAATGAATCCAGTAGGATACCTGGGTGGAAGAAATGAAACGAGTTGCAGAGAATGGGC                                                                                                                                                          ]




>consensus_11016#1
ATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATG
GGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCT
CTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATT
TCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAG
GTTTGTTTTATAACTGTTGCACCATAATAGTCAAATAATCTAATGGATAGTTCATAACCT
TCTTCATTTTGACTACTGTTTACAAGTTGTCAGGTTAGAAACTTGATTCATGAGTGTGTT
TTTCAGAGTGCACTCCTAGGATTTGTTTTTGAAGTGCCACTTAAACCCTCTCTGTGTATG
TTGTGTGTTTGATGCAGGTGAGGCAGGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGT
CTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCACGTAGGCTACCTGGGTTGAAGAA
ATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCTACTTTCTGTAATGAGCTATTATC
AGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTAT
CCCAAGTTAAACTGCTATCTTCCCCTGATGATTGGCCTGAAATGGAGGCTCAGGAATTT

consensusID : consensus_11016#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 447
fasta sequence

                              [TGCCTGGACTGAAGGAGTAGAAATCCATAGTGAGCCGGTCGAGAGGGACAGGGTACTCCCCATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACGTCACCGTTGTCGTGCAGGACTCTGTTCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGCCCCGGTGATCGGCCACCTCCTCGACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTACTACTGGAAGGCTAACATATGGAG]

[+] EMBL CF309783             [TGCCTGGACTGAAGGAGTAGAAATCCATAGTGAGCCGGTCGAGAGGGACAGGGTACTCCCCATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGGCGGCACCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGACCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACGTCACCGTTGTCGTGCAGGACTCTGTTCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGCCCCGGTGATCGGCCACCTCCTCGACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGCTTACTACTGGAAGGCTAACATATGGAG]




>consensus_11016#2
TGCCTGGACTGAAGGAGTAGAAATCCATAGTGAGCCGGTCGAGAGGGACAGGGTACTCCC
CATCCCTGACACGGCCAGCCAGATGGTCTTCCACTGCACCACCAAGGTCATCACGCTCGG
CGGCACCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGACGTGCTTGA
CCAACACCTGGTGCTCCGCGACGTGCCACTGCCCAAGCCAGCGAGAAGCAACCGCAAATC
CTTCTGCAGAGGGCCGCCGCATCATTACCGGGACGTCACCGTTGTCGTGCAGGACTCTGT
TCCCACCTGCATCAAGTACGTTGAGATGGTGACCCGCCCCGGTGATCGGCCACCTCCTCG
ACAACGACAGCCGCCGCAACATTCTGATGACTCTGACTCTGATGAGGAAGAGGACGTTGC
TTACTACTGGAAGGCTAACATATGGAG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11016#0      TCAAATTCCCCATTCTTCCTCGTCTTGGGGCACAACTCCGATTTAGGGTTAGCTCCTCCT 60
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      CCTCCTCATCGCTGATTAGGATTCGATTCGACCGGATCCCTCGCCGCCTTCGCCATGGAT 120
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      GATGGTGATGAGCCCGTCCCCTACGTCATGGATGAGGGTGTGCTACTACCCTTGCTGTTT 180
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      CCGCCGCCGCTGCCGGCCGACGACGACGCCACCGCCGGCGTGAGCCCAAGCTGGGTGTAC 240
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      CTCGAAGACAGAGCTTACGTCTCCCCCGATGCCGTCTCCAACTCCACCACCGCCTTCTCC 300
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      ACCACCACCACCGGCGTAAGCATCCATGTCTCCTTCTGCCTCGCCCGCCCGCCGCGCCTC 360
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      TCCTACCTCTGCGTCCACTGCCCCCGCCCCGGCGACGGCGAGGGCGCCTACCGGTTCACT 420
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      GTCGATCCCCGAGTCCTCGGCACGCACACCGATGTAGCCCTCCTCCGCGTCCCGCACCCC 480
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      AACGACGGGCTCCACCGCGGAATCAAATCCTACGACTACTTCGTCTACACGGCCCGCCCA 540
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      GGCCCGGGCGCCTCCTTGCTCCGGCTGCTGCCGAACCCGCGGGTCTCCCCCTTCCGCAAC 600
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      -----------------------ATGATCCAGAGGAGACATTGAGGAGGCTGGTCACAGG 37
                                                                                   

consensus_11016#0      GAGGAGGTCGCCATCGTCCGCTGCTCCGGCGGCGCCCGCTACGTCATCGCCTGCCTCATG 660
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      TTTCCCCACATTGGGTATGGATGGGGATGTCATTTCTTTCCTGTCCAAGATCAATCGCTT 97
                                                                                   

consensus_11016#0      CCAACCATCAGGCGCCCCATGGAGTTCAAGGTTATGCGCTTCGACTCCGACGTCGGCCGC 720
consensus_11016#2      --------------------------------------------------------TGCC 4
consensus_11016#1      GGATGATAAGGGATGGGTTATCTCTGTTGATCTGAGGAGTAAGACGCTGCAAGGCGTGGC 157
                                                                                  *

consensus_11016#0      TGGAAATCCACAGCTGTGT----CCATCAGTGAGCCGGTCGAGAGGGACAGGGTGCTCCC 776
consensus_11016#2      TGGACTGAAGGAGTAGAAA----TCCATAGTGAGCCGGTCGAGAGGGACAGGGTACTCCC 60
consensus_11016#1      TGAGCTTGATGAGAGGAAGAATTTCCTCTTCAAGCGCTACTACAACACCAGTGAGATCTC 217
                       **         **  *        *       ***    * * *    *** *   ** *

consensus_11016#0      CA--TCCCTGACACGGCCAGCCAGATGGTCTT----CCACTGCACCACCAAGGTCATCAC 830
consensus_11016#2      CA--TCCCTGACACGGCCAGCCAGATGGTCTT----CCACTGCACCACCAAGGTCATCAC 114
consensus_11016#1      CAAATATCTTATCAAGGCTACAGGTTTGTTTTATAACTGTTGCACCATAATAGTCAAATA 277
                       **  *  ** *    * *  *  * * ** **    *   *******  *  ****    

consensus_11016#0      GCTCGGCGGCA---CCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGA 887
consensus_11016#2      GCTCGGCGGCA---CCATCGGCTGGGTGGATCTCTGGAGAGGGATCCTGCTGTGTGACGA 171
consensus_11016#1      ATCTAATGGATAGTTCATAACCTTCTTCATTTTGACTACTGTTTACAAGTTGTCAGGTTA 337
                              **      ***   **   *   * *    *  *    *  * ***  *   *

consensus_11016#0      CGTGCTTGACCAACACCTG-GTGCTCCGCGACGTGCCACT-GCCCAAGCCAGCGAGAAGC 945
consensus_11016#2      CGTGCTTGACCAACACCTG-GTGCTCCGCGACGTGCCACT-GCCCAAGCCAGCGAGAAGC 229
consensus_11016#1      GAAACTTGATTCATGAGTGTGTTTTTCAGAGTGCACTCCTAGGATTTGTTTTTGAAGTGC 397
                           *****   *    ** **  * *     *  *  ** *     *     **   **

consensus_11016#0      AACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACATCACCGTTGTCGTG 1005
consensus_11016#2      AACCGCAAATCCTTCTGCAGAGGGCCGCCGCATCATTACCGGGACGTCACCGTTGTCGTG 289
consensus_11016#1      CACTTAAACCCTCTCTGTGTATGTTGTGTGTTTGATGCAGGTGAGGCAGGAACTCTTGTA 457
                        **   **  *  ****   * *      *  * **    * **         * * ** 

consensus_11016#0      CAGGACTCTGTTCCCACCTGCATC--AAGTACGTTGAGATGGTGACCCGTCCCGGTG--- 1060
consensus_11016#2      CAGGACTCTGTTCCCACCTGCATC--AAGTACGTTGAGATGGTGACCCGCCCCGGTG--- 344
consensus_11016#1      AAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTAATTAATGAATCA 517
                        *       ***   *   *  **  **  * *  **  * *  *         *     

consensus_11016#0      -ATCGGCCACCT---CCTCGACAACGACAGCCGCCGCAACATTCTGATGACTC-TGA--- 1112
consensus_11016#2      -ATCGGCCACCT---CCTCGACAACGACAGCCGCCGCAACATTCTGATGACTC-TGA--- 396
consensus_11016#1      CGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGCGATTCATGAGCT 577
                         * *** ****          ** ** *   ** ***       *  ** ** ***   

consensus_11016#0      -----CTCTGATGAGGAAGAG--GACGTTGCTTACTACTGGA-AGGCTAACATATGGAGC 1164
consensus_11016#2      -----CTCTGATGAGGAAGAG--GACGTTGCTTACTACTGGA-AGGCTAACATATGGAG- 447
consensus_11016#1      ACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCTACTTTCTGTAAT 637
                            ** * *****  *        **** *   * *  ** * ****   * ** *  

consensus_11016#0      ATGCCGATACCAGTTGGTTCATGGGAGGATTGGCAGATGGAGTGCACGGTGGATGTCACT 1224
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      GGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCCTGATGATTGGCC 697
                                                                                   

consensus_11016#0      GACATCGCCGTCGACAATGTCAGGTTCAGTGAGCTGCTGCCAAAGATTGGCAATGATCCA 1284
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      TGAAATGGAGGCTCAGGAATTT-------------------------------------- 719
                                                                                   

consensus_11016#0      GAGGAGACATTGAGGAGGCTGGTCACAGGTTTCCCCACATTGGGTATGGATGGGGATGTC 1344
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      ATTTCTTTCCTGTCCAAGATCAATCGCTTGGATGATAAGGGATGGGTTATCTCTGTTGAT 1404
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      CTGAGGAGTAAGACGCTGCAAGGCGTGGCTGAGCTTGATGAGAGGAAGAATTTCCTCTTC 1464
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      AAGCGCTACTACAACACCAGTGAGATCTCCAAATATCTTATCAAGGCTACAGGTGAGGCA 1524
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      GGAACTCTTGTAAAAACTGGGGTTAATAGTAGAGTCTCAAAAAAGAAGAAGTAGGAATTA 1584
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      ATTAATGAATCACGTAGGCTACCTGGGTTGAAGAAATGAAACGAGCTGCAGAGACTGGGC 1644
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      GATTCATGAGCTACTTTCTGTAATGAGCTATTATCAGAGTTGTTCTGTGCAAGACATGCT 1704
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      ACTTTCTGTAATGGATTTGGTTTTCGTCTGTTTATCCCAAGTTAAACTGCTATCTTCCCC 1764
consensus_11016#2      ------------------------------------------------------------
consensus_11016#1      ------------------------------------------------------------
                                                                                   

consensus_11016#0      TAAAAAAAAAAAAAAAAAA 1783
consensus_11016#2      -------------------
consensus_11016#1      -------------------