Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1104 cluster # 1104       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1104#0 length = 622 sequences # 2  

consensusID : consensus_1104#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 622
fasta sequence
                              [TCTAGATTCGGAATGTGTTTCTCAATGGAAATGTCAGCTGCTTTTGCAGCTATCGGTTTGTTTTCTTCTTGGTGGATCTGGTCGAAAACTTCGAATACACAATTAGCATCCGGTGTATTTTTCTTCTTCACCATGGAATTATTACAAGCTATTCAATACTTTTTCATTGCTCCGAATCTTGACTCACCGATTTGCAATACAATTGTCAATCAAGTCCTAACAATAGCCGGCTTTCTCCATATCTGTTTACAACCATACTTCTGTCATGTCATCAATGCTTCATTGACAAAAAATGCANAATATATTGATCGTTATATGATCATTANACGTTTATGTTTAATCGGTGGTTTCATGTTATTCGGCCGATTTTTGTTGGCTTACCAATGGCCACAAACAATGAACGGTCCATCAACTGAATGGTTACGTGGAGACNAACTATGTACCTATCGGGGCAAATACCATCTTGCTTGGTCAATTCCCATGGCTGATCCCACCTATGTCATTCCCGGTGCGGNCATTCATTCATTTCTTAATG-TTGCACCCATCTTTNNGC-TTATATGA-AAGAAAGGCATGGNNTATTCAGGCATATTTTTGTTTGTTTTTGG-CCGTACTTAGCCGGTCT]

[+] EMBL CA754762             [TCTAGATTCGGAATGTGTTTCTCAATGGAAATGTCAGCTGCTTTTGCAGCTATCGGTTTGTTTTCTTCTTGGTGGATCTGGTCGAAAACTTCGAATACACAATTAGCATCCGGTGTATTTTTCTTCTTCACCATGGAATTATTACAAGCTATTCAATACTTTTTCATTGCTCCGAATCTTGACTCACCGATTTGCAATACAATTGTCAATCAAGTCCTAACAATAGCCGGCTTTCTCCATATCTGTTTACAACCATACTTCTGTCATGTCATCAATGCTTCATTGACAAAAAATGCANAATATATTGATCGTTATATGATCATTANACGTTTATGTTTAATCGGTGGTTTCATGTTATTCGGCCGATTTTTGTTGGCTTACCAATGGCCACAAACAATGAACGGTCCATCAACTGAATGGTTACGTGGAGACNAACTATGTACCTATCGGGGCAAATACCATCTTGCTTGGTCAATTCCCATGGCTGATCCCACCTATGTCATTCCCGGTGCGGNCATTCATTCATTTCTTAATG TTGCACCCATCTTTNNGC TTATATGA AAGAAAGGCATGGNNTATTCAGGCATATTTTTGTTTGTTTTTGG CCGTACTT         ]
[+] EMBL CA754666             [                  TTCTCAATGGAAATGTCAGCTGCTTTTGCAGCTATCGGTTTGTTTTCTTCTTGGTGGATCTGGTCGAAAACTTCGAATACACAATTAGCATCCGGTGTATTTTTCTTCTTCACCATGGAATTATTACAAGCTATTCAATACTTTTTCATTGCTCCGAATCTTGACTCACCGATTTGCAATACAATTGCCAATCAAGTCCTAACAATAGCCGGCTTTCTCCATATCTGTTTACAACCATACTTCTGTCATGTCATCAATGCTTCATTGACAAAAAATGCAAAATATATTGATCGTTATATGATTATCAAACGTTTATGTTTAATCGGTGGTTTTATGTTATTCGGCCGATTTTTGTTGGCTTACCAATGGCCACAAACAATGAACGGTCCATCAACTGAATGGTTACGTGGAGAAAAACTATGTACCTATCGAGGCAAATACCATCTTGCTTGGTCAATTCCAATGGCTGATCCAACCTATGTCATTCCCGGTGCGGCCATCCATTCATTTCTT ATGTTTGCACCATTCTTT  GCTTTATATGANAAGAAAGGCATGGTTNATTCAGGCATATTTTTGTTTGTTTTTGGCCCGTACTTAGCCGGTCT]


>consensus_1104#0 TCTAGATTCGGAATGTGTTTCTCAATGGAAATGTCAGCTGCTTTTGCAGCTATCGGTTTG TTTTCTTCTTGGTGGATCTGGTCGAAAACTTCGAATACACAATTAGCATCCGGTGTATTT TTCTTCTTCACCATGGAATTATTACAAGCTATTCAATACTTTTTCATTGCTCCGAATCTT GACTCACCGATTTGCAATACAATTGTCAATCAAGTCCTAACAATAGCCGGCTTTCTCCAT ATCTGTTTACAACCATACTTCTGTCATGTCATCAATGCTTCATTGACAAAAAATGCANAA TATATTGATCGTTATATGATCATTANACGTTTATGTTTAATCGGTGGTTTCATGTTATTC GGCCGATTTTTGTTGGCTTACCAATGGCCACAAACAATGAACGGTCCATCAACTGAATGG TTACGTGGAGACNAACTATGTACCTATCGGGGCAAATACCATCTTGCTTGGTCAATTCCC ATGGCTGATCCCACCTATGTCATTCCCGGTGCGGNCATTCATTCATTTCTTAATGTTGCA CCCATCTTTNNGCTTATATGAAAGAAAGGCATGGNNTATTCAGGCATATTTTTGTTTGTT TTTGGCCGTACTTAGCCGGTCT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)