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Oryza sativa
cluster # 11040 cluster # 11040       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11040#0 length = 1608 sequences # 8  

consensusID : consensus_11040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1608
fasta sequence
                              [GAGTAGAAAATCTTCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGCTAATAGAATCTGAGTGCGAATGGGTCATGGCCAGCTAATTGGTGTGTTCAGTCATTGACCTAAATGTGGGCATGTGTGCGAATGGGTCATAGCCAGCTAATGGAATCTGAGTGGGAGCATTCTTAATGCTACAGTAGTCGACCTTCGTTGTTAGTGGCATAAGGTACATTTGTTTTTTCTCAATAGGGATTAAATACACATTCAGACAATGAATTAAGATGAATCTGACTTTTCTTTTT]

[+] EMBL CF340657             [GAGTAGAAAATCTTCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL AK110873             [             TCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGAGAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGCTAATAGAATCTGAGTGCGAATGGGTCATGGCCAGCTAATTGGTGTGTTCAGTCATTGACCTAAATGTGGGCATGTGTGCGAATGGGTCATAGCCAGCTAATGGAATCTGAGTGGGAGCATTCTTAATGCTACAGTAGTCGACCTTCGTTGTTAGTGGCATAAGGTACATTTGTTTTTTCTCAATAGGGATTAAATACACATTCAGACAATGAATTAAGATGAATCTGACTTTTCTTTTT]
[+] EMBL CF339819             [                 CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF339896             [                 CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGAGAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF340016             [                 CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF338424             [                 CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF339375             [                 CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCATGCTAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGACCTGGAGAGATCATGTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB667054             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGG TATAGATTACTTGAGCAAGTGCTG TTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGGTAATA                                                                                                                                                                                                                                          ]


>consensus_11040#0 GAGTAGAAAATCTTCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCC CGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGG GCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTC CCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGA TGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGC AGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAG GTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAG ATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTG TTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGA TAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTAC TTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGT TGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTC ATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTAC TTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTC AAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCT GTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAAC CTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGC CTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGG CCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAA CACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCA CGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCA TGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAG TTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGCTAATAGAATCT GAGTGCGAATGGGTCATGGCCAGCTAATTGGTGTGTTCAGTCATTGACCTAAATGTGGGC ATGTGTGCGAATGGGTCATAGCCAGCTAATGGAATCTGAGTGGGAGCATTCTTAATGCTA CAGTAGTCGACCTTCGTTGTTAGTGGCATAAGGTACATTTGTTTTTTCTCAATAGGGATT AAATACACATTCAGACAATGAATTAAGATGAATCTGACTTTTCTTTTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)