These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11040#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1608 fasta sequence [GAGTAGAAAATCTTCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGCTAATAGAATCTGAGTGCGAATGGGTCATGGCCAGCTAATTGGTGTGTTCAGTCATTGACCTAAATGTGGGCATGTGTGCGAATGGGTCATAGCCAGCTAATGGAATCTGAGTGGGAGCATTCTTAATGCTACAGTAGTCGACCTTCGTTGTTAGTGGCATAAGGTACATTTGTTTTTTCTCAATAGGGATTAAATACACATTCAGACAATGAATTAAGATGAATCTGACTTTTCTTTTT] [+] EMBL CF340657 [GAGTAGAAAATCTTCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGT ] [+] EMBL AK110873 [ TCCCCGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGAGAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGCTAATAGAATCTGAGTGCGAATGGGTCATGGCCAGCTAATTGGTGTGTTCAGTCATTGACCTAAATGTGGGCATGTGTGCGAATGGGTCATAGCCAGCTAATGGAATCTGAGTGGGAGCATTCTTAATGCTACAGTAGTCGACCTTCGTTGTTAGTGGCATAAGGTACATTTGTTTTTTCTCAATAGGGATTAAATACACATTCAGACAATGAATTAAGATGAATCTGACTTTTCTTTTT] [+] EMBL CF339819 [ CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATA ] [+] EMBL CF339896 [ CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGAGAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCA ] [+] EMBL CF340016 [ CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGGTTATAGATTACTTGAGCAAGTGCTGTTTTGCCTACCCCAGCCTCGCCTACGATACATA ] [+] EMBL CF338424 [ CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCAGGCGAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGTCCTGGAGAGATCATGTTCCGAACTAGCTTGGAGTGTTTCCAGACCCATTTCAGAATCAAAAGGATGCTGTTCTGCTGCAAAAGAACAAAATATTTTCTTGATGAAATCCTCTGAGTCAGACCTTTGAGATAGAGAGACCCATCCTCTCTGATTGAAGGC ] [+] EMBL CF339375 [ CGAAGGGCGCGAGGCGGCGAGCCTCACGCCCTCTCCCGAGTCCCGAGTGAGGACACGCCGGCGGAGGCCGATGGCCCTAGCCGCTCTACCTCTACCTCTACGGGCTCCTGAACCGTGTCGGCGTTCACGAGGCAGGCGGTGCCTAGGTGATGCATGCTAGCTCCCCCTCCTCTCCTCCGCTGGTTGCTTCTGCGGGCCGTCTCTTTGCCCAGGTGCGGACAGATGAAGGCGTCGATTTGATCATCTGAAGTGGCCGGGAATCCGCAATCATGCGGTGGCATGCAGCCGTCCTATTCGATGACAATGCAGTGGTATCTTTCTGATGGAGTAACTCGGAATTAAGGTTATCCTTTGCATTGTCAAGGACAAGGAAGAATCTCTTGTTCTGTATGGACCTGGAGAGATCATGTTC ] [-] EMBL CB667054 [ ACCCATCCTCTCTGATTGAAGGCCTTCTTGACATTAGGGTGG TATAGATTACTTGAGCAAGTGCTG TTTGCCTACCCCAGCCTCGCCTACGATACATACAACTTTCACAGTTGCAGTTCCCCGTGTCTCTTCCTGCATTCTGGATGCTGGAAAATGTTCAGCTTGTGCTTCATTTGGAAATATGATGCTCATTAATTGGTCCTTCTCTTTCTCACGACCATGGAACACTACTTGTATTTCTGGAAGAAACCCTACCATATCCTCTTTAGAATCATTCAATTTTAACAAGTCAAAAAAATTTCCAGACTTACTGGCAATCTTGTCGAGCCTTGCCAGGAGAGTCTTCAGTCTGTATATGTCATCATCAACAAAACCCAGATTCTTCATCATGTATGCCAGAAAACCGCTAACCTTGTTCTGTTGGCTCTTTTGTATTCTCTTGATCTCAAAGTCATCCAGCAGCTCTTCCGCCTCAGAAGCAATTTTCTTGATCAACTCCAGCCAGCCGGTGAAATTATCATCGACGACGGGCCTTCGCTCCGCGACATCAAGCACTGCTTGCAGATGAACAAGGGAAGCCTCCACGTTAAACACCCGCAACGTCACCATGCAGCTCATGGCGCTCCTCCAGGATGGAACGCGCCTTGCCCACGAAGTTGGCGATCACAGCTCCTGCGAACCATCCGCCGATGGTCAATCCGCCTCCAACCATGTCGAGGTCGCCCCTCCAACTCCAAGGCTTCAACTAGTAGCACGGAACAGGAAAGAGAGTTCAGAATTGCATCCTAGTAGAAGAGGACTGGCAGATGTTCTCATAAGGTAATA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||