These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11045#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1200 fasta sequence [NNCATCAGAACACAAGCAAATCCAACACTTCTTCCTTG-AGCTCCTTTCCATCGTCAACTTCCTTAGCTGGTTACACTTCGTTGTCCAATCGAAAAGCATAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTGCTTGTGAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGACATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAC-TTCCTCCTGTCGCTCTCGGT-GGCGCCCTACGCCGCCGCGCCGTCCGTTGCGCAGTGGTGGAGCAG-CATCGACGAGCTCTACTTATCCAAGGCGGTGCAAACCAACTCCAACGGCCAGAGCAAGAAAACCCAGGTTCTGGTCGCGAGCCAAGTGTCCGACATCAACTGCTCCATGGGCAAGTCGCTCACCCTGGCGCAAGTCGCCGCCCTAGCGGCGCAGGCCAAGCCCAAGAAGGGCGGCATTGCTCTCGTTTTCACGGCGCAGGACGTGACCGTGGAGGGCTTCGGCATGAGCCGGTGCGGCCTGCACGGCTCCGACGCCAAGTCCGGCACCGCCTACATCTGGGTCGGCAACCCGGCGACGCAGTGCCCCGGCGAGTGCGCGTGGCCGTTCCACCAGCCCATGTACGGCCCGCAGGGCGCGCCGCTCGTGGCGCCCAACGGCGACATCGGGGCGGACGGCATGGTGATGAACCTCGCCAGCATGCTCGCCGGCACGGTGACCAACCCGTTCGGCGACGGGTACTACCAGGGCAGCAGGGACGCGCCGCTGGAGGCCGCCACGGCGTGCCCGGGAGTCTTCGGGAGCGGCGCGTACCCTGGATTCGCCGGTGAGCTGAAGGTGGATCAGGCGACCGGGGCAAGCTATAACGCCAATGGCGCGAACGGGAGGAAATACCTGCTTCCCGCGCTCTACAACCCCTCCACTGGTACATGCAACACGCTGGTGTAGAGCAAAATGCAACAGATGGCGATTTTTTTGTTGATGTATATACGGATCGTGTGTAATTCTTTCATTTGTGGCAGTCATGTAAGCAGTTGGCAATAATGCTGATCGGAGAAATGAAAGTGAGTTTCCGGAACCAAAAAAAAAAAAAA] [+] EMBL AK062900 [ CATCAGAACACAAGCAAATCCAACACTTCTTCCTTG AGCTCCTTTCCATCGTCAACTTCCTTAGCTGGTTACACTTCGTTGTCCAATCGAAAAGCATAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTGCTTGTGAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGACATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAC TTCCTCCTGTCGCTCTCGGT GGCGCCCTACGCCGCCGCGCCGTCCGTTGCGCAGTGGTGGAGCAG CATCGACGAGCTCTACTTATCCAAGGCGGTGCAAACCAACTCCAACGGCCAGAGCAAGAAAACCCAGGTTCTGGTCGCGAGCCAAGTGTCCGACATCAACTGCTCCATGGGCAAGTCGCTCACCCTGGCGCAAGTCGCCGCCCTAGCGGCGCAGGCCAAGCCCAAGAAGGGCGGCATTGCTCTCGTTTTCACGGCGCAGGACGTGACCGTGGAGGGCTTCGGCATGAGCCGGTGCGGCCTGCACGGCTCCGACGCCAAGTCCGGCACCGCCTACATCTGGGTCGGCAACCCGGCGACGCAGTGCCCCGGCGAGTGCGCGTGGCCGTTCCACCAGCCCATGTACGGCCCGCAGGGCGCGCCGCTCGTGGCGCCCAACGGCGACATCGGGGCGGACGGCATGGTGATGAACCTCGCCAGCATGCTCGCCGGCACGGTGACCAACCCGTTCGGCGACGGGTACTACCAGGGCAGCAGGGACGCGCCGCTGGAGGCCGCCACGGCGTGCCCGGGAGTCTTCGGGAGCGGCGCGTACCCTGGATTCGCCGGTGAGCTGAAGGTGGATCAGGCGACCGGGGCAAGCTATAACGCCAATGGCGCGAACGGGAGGAAATACCTGCTTCCCGCGCTCTACAACCCCTCCACTGGTACATGCAACACGCTGGTGTAGAGCAAAATGCAACAGATGGCGATTTTTTTGTTGATGTATATACGGATCGTGTGTAATTCTTTCATTTGTGGCAGTCATGTAAGCAGTTGGCAATAATGCTGATCGGAGAAATGAAAGTGAGT ] [+] EMBL AU068966 [nntagnancACA AAGCAAATCCAACACTTCTTCCTTGAAGCTCCTTTCCATCGTCAACTTCCTTAGCTGGNTACACTTCGTTGTCCAATCGAAAAGCATAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTGCTTGTGAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGACATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAC TTCCTCCTGTCGCTCTCGGT GGCGCCCTACGCCGCCGCGCCGTCCGTTGCGCA TGGTGGAGCAGCCATC ] [+] EMBL C27452 [ GCAAATCCAACACTTCTTCCTTG AGCTCCTTTCCATCGTCAACTTCCTTAGCTGGTTACACTTCGTTGTCCAATCGAAAAGCATAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTGCTTGTNAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGACATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGNCGGCGCAGAAGTCGATACTCTTCGACTTTCCTCCTGTCGCTCTCGGTGGGGGNCCTACGGCGGCGg ] [+] EMBL C27295 [ ACACTTCTNCCTTG AGCTCCTTTCCATCGTCAACTTCCTTAGCTGGTTACACTTCGTTGTCCAATCGAAAAGCATAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTNCTTGTAAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGANATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAC TTNCTNCTGTCGCTCTCGGT GGCGNCCTACGCCGACGTGNCGTCCGTTGCGCAGTGGTGGAGCAG CATCGACGAGCTCTACTTAT CAAGGNGGTGCAAACCAACTCC ] [+] EMBL OS0618A [ TAGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCACTGCTTGTGCTTGTGAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCCAGACCCGGCTGACATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAC TTCCTCCTGTCGCTCTC ] [+] EMBL C27064 [ AGTTAGTTCCAAAATGGCTGCAAAGGCAGTTATGCTTGCNCTGCTTGTCCTTGTAAGCACGGCTCAGGTATCCATGGGTGCAAGGCGGCGCATGGAGCTGTACAAGCNAGACCCGGCTGANATGCTCTCCTACCACAGCGGCGCCGTGCTCCAGGGCAACATCCCGGTGTCCATCTACTGGTACGGCAAGTTCACGCCGGCGCAGAAGTCGATACTCTTCGAN TTCCTCCTNTCGCTCTCGGT G ] [+] EMBL AU181679 [ ACATCGGGGCGGACGGCATGGTGATGAACCTCGCCAGCATGCTCGCCGGCACGGTGACCAACCCGTTCGGCGACGGGTACTACCAGGGCAGCAGGGACGCGCCGCTGGAGGCCGCCACGGCGTGCCCGGGAGTCTTCGGGANCGGCGCGTACCCTGGATTCGCCGGTGAGCTGAAGGTGGATCAGGCGACCGGGGCAAGCTATAACGCCAATGGCGCGAACGGGAGGAAATACCTGCTTCCCGCGCTCTACAACCCCTCCACTGGTACATGCAACACGCTGGTGTAGAGCAAAATGCAACAGATGGCGATTTTTTTGTTGATGTATATACGGATCGTGTGTAATTCTTTCATTTGTGGCAGTCATGTAAGCAGTTGGCAATAATGCTGATCGGAGAAATGAAAGTGAGTTTCCGGAACCAAAAAAAAAAAAAA] [+] EMBL AU100790 [ GCCACGGCGTGCCCGGGAGTCTTCGGGAGCGGTGCGTACCCTGGATTCGCCGNTGAGCTGAAGGTGNATCAGGCGACCGGGGCAAGNTATANCGCCAATGGCGCGAACGGGAGGAAATACCTGCTTCCCGCGCTNTACAACCCCTCCACTGGTACATGCAACACGCTGGTGTAGAGCAAAATGCAACAGATGGCGATTTTTTTGTTGATGTATATACGGATCGTGTGTAATTCTTTCATTTGTGGCAGTCATGTAAGCAGTTGGCAATAATGCTGATCGGAGAAATGAAAGTGAGTTTCCGGAACCAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||