These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11048#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3291 fasta sequence [ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGACAAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG---GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG] [+] EMBL AK101797 [ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGACAAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG] [+] EMBL AK099879 [ CCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAGAGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAGGTAGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAGACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAGAATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCATGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCATCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGAAATGCCTACAATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAACATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTCTCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTGGAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACACTGAGAT ] [+] EMBL CB649269 [ TCTGTGTAAAGCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCTGGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCAGCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATGCAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATGTTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGCACGGCGCCACCAG GCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCAGTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGCCTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCCACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCTGGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAAACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACCCATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGACAAGGATTGCACAAAGACTCACCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTC ] [+] EMBL CF304803 [ ATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGGAGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGACGATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTCAAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGTCTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAAGAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGAACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATTGATCAGCCGTCACACTGTCAAAGGATCAAGAACCAA ] [+] EMBL CF304716 [ CTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTC ] [+] EMBL CF303517 [ CTAGAGTTGTCGGAATGCAACAAGGAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGCGACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCTGAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGATGCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCATGAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCGAATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACAT ] [-] EMBL CB649270 [ TGGCAACCAGATAAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGAGGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTACCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGATGCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGAACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGAACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCAGTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGATCCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGATGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTTGGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAAAGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATAGGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGGCTATACAATCCATGAGTTAACTGACATATATATATCTACA ] consensusID : consensus_11048#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 473 fasta sequence [GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGACCTTACTGTTATGAAAACATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AU101926 [GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTTTCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGTCCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGCAGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACACATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCGAATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAATCGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGACCTTACTGTTATGAAAACATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11048#0 ATTGCACACATATCTTCTCGTTCTTAAATCAAGCTGCTGCCTCTCCCTCCTCCTCTTGAC 60 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AAGCACCATTCCTCTCAACTGAACCTGTCAAACAGAGAGAGAAGTAGATGATAGCGTGAG 120 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AGAATAGAACAGAAGAAAGAAGATAAAAAAAAAGAAAAGGAAAGGAAAGCTCTGTGTAAA 180 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GCCTGCATCTACGTGCTCTCTTTGGTTGGGGTGTTCTTGCTGCTAGAACTAGCTTAGCCT 240 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GGTTCTGCCATGGAGTGAAGAGGCCTCTCGTTCATCTCCGATTCTTGGGGGTTGTCTTCA 300 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GCTGTTCAGCAAGAGCCGAGAGCTTAGCTTGGGGCAAAGGAAATGCCGTCCCGGATGATG 360 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CAGGCGTTCGCGCAGGAGGCTTCCGACTTCGACCGGCAGATGGGCTGCATGGCCGGCATG 420 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 TTCCAGATCTTCGACCGCCGCCGCCTCCTCACCGCGCGTCAACGCGGCGGAGCCCGAGGC 480 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACGGCGCCACCAGGCCATGTTTTGCCAAACAGCAACAGCAATGTCTCGATTCAAAACCCA 540 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GTTGCTTCAAACAACACTCTGGACAAAACCTTCAGCAAAAGTATGACCGAGAACAGTAGC 600 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CTCTCCATGGAATCATCGCGGGCATCTTCTTCTTCCTCATCGTGCTCTTCGTTCTCGTCC 660 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACAGACATCAACAGACCAATACAACAAGAGCTCTCCTACATCAACAAAGAGCGTTTTGCT 720 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GGGAAGCCACCAAGAAGCTCACAGACAAAGAGTGTGAAATGTTCCAAGACAGAGGCCAAA 780 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACCAAAGACCCACACACTGGCTTTAGAGACATTGTCAAGGAGTCCATCAACCGGGAAACC 840 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CATGGTATGACCATCAAGACGTCGACAAAGGAGTCCAGAAAAGGATTGCACAAAGACTCA 900 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CCAAGGCCGTTGCTGATCTCCAAATCAACCGATGGAACTTACGTGATTGGGATCGACAGG 960 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AGCACCGGCGTTCCTGGATATGTTCATGAATCCAGCAGGCCACCACGCTTCTCATGCGAC 1020 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GATCGGCAACTCCTGAGGTCGGTCGAAGCGCAAGACAGCAAGAAGCCTTCAGCAAAGCTC 1080 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AAGGAGCTTCCCAGGCTGTCCTTGGACAGCAGAAAAGAATCCATGAATCCATGTTCACGT 1140 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CTGAAGAACTCTGGCTACATAAGAACTGATGACAACCTCCTGGATGTTCTGAAGCACCAA 1200 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GAATCGCCGAGCCATCAGCGGGCCAGCAGCGTCGTTGCCAAGCTCATGGGGTTGGAAGGA 1260 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACTACTCCTGACATCCATGAGACGGCAAGGTCACCTACACCTGTCCATGGCACGCAAATT 1320 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GATCAGCCGTCACACTGTCAAAGGATCAAGAACCAAGATCATAGTGTCCCGGTGCAGAAG 1380 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AATCACTCTCCAGTACTGAAAACCAATCCTTCTCCAAGAATTATCCCTGAAGCAGCCCCA 1440 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 TGGAGACAGAATGAGAGAGCTGTAACAGGACGTGCAGCTGAAGTGAAGCCAAGAACTGCA 1500 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 TCCATCTATGCTGACATACAGAGAAGACTCAGGGGTCTAGAGTTGTCGGAATGCAACAAG 1560 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GAACTGAGGGCTCTCAGGATATTGAGCACACTGCACAAAAAGGATGGCCCAAGCCAGAGC 1620 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GACAACAATCCTGAATTAACAGCCATTCAAAAGAAGGCCTCTGAACAAATAGTTGATTCT 1680 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GAAAATTTCCAGTCTCCAATTGTGATCATGAAACCAGCAAGATGCATCACAAAACCTGAT 1740 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GCTTCAGATACTTTGGTTGCTCCCCTTTCAAGGCCAAAAGGCATAAGAAGACTACGGCAT 1800 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GAAGAGACATCTTTCACCAGGAAGAATGAAAACAGTGATAGCAAGAGAAATCATTCTCCG 1860 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AATGAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTT 1920 consensus_11048#1 ---GAAAGTGCTCATTCCAGTGGTGAGGAACCTGTAAATTCTGCAAGATCACCAAGGCTT 57 ********************************************************* consensus_11048#0 TCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGT 1980 consensus_11048#1 TCCAGCTCATTGAGCCCCAGGCTGGCACAGAAGAAGGCGGACTCTGAAAGGAGGTCTCGT 117 ************************************************************ consensus_11048#0 CCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGC 2040 consensus_11048#1 CCACCGGTTTTGCCAACGTCACCAGGCAAGAAATCTAAAGAAACAGTGTCCCCAAGAGGC 177 ************************************************************ consensus_11048#0 AGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACAC 2100 consensus_11048#1 AGGCTAAGATCAAGGCACTCGCAAACAAAGAGCAACTCTGACAACGATAATGTGTTACAC 237 ************************************************************ consensus_11048#0 ATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCG 2160 consensus_11048#1 ATCCCTGAAACTAAAATCAATTTGGCAAAGCAGATCGATGTGGGTGTCGTTGATCATCCG 297 ************************************************************ consensus_11048#0 AATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAAT 2220 consensus_11048#1 AATCCTCTGAATGCCAACTCACCATATATCCATCAAAGCAAAATAGCTTCAACACCCAAT 357 ************************************************************ consensus_11048#0 CGTGAGGAAATGCCTAC-AATTCTACCTGCAGACAAGAAGAAGATCCATCCACAGGAGAA 2279 consensus_11048#1 CGTGAGGTACAGAAAATTAACTGTAGTACCACCTCTAAAGA--CCTTACTGTTATGAAAA 415 ******* * * * ** * ** ** **** * * ** ** consensus_11048#0 CATCCCAAGTCCTGTGTCAGTTCTTGATGCAACATTTTATCATGAGGGGTCATCGCCTTC 2339 consensus_11048#1 CATTATCTGGCAGTAACAACTGATTGACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- 473 *** * * * * **** ** * * * * * consensus_11048#0 TCTGAAGAGAATCTCAGATTCCTTCAAAGACGGCGAGACGCATACTTCAGATGAGAGTTG 2399 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GAACCCAACAAGCCTCCCTGATACACCACCTTCAAAGGCAAGCAACGATGGCAACCAGAT 2459 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AAAGGCAGAAAACATGAAAGCCCTCATCCAAAAGCTTGAGCTCTTGCAAATGTTGAGTGA 2519 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GGAAGCTCTGAAAACCGATGACACTTTTTCATCAGTTGCTGCCAATAAAGATCACCAGTA 2579 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CCTCTACGAGATACTTTCAGCATCAGGGATCCTACACAACAAACTAAATTTTCAAATGAT 2639 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GCCTCATCAGCTGCGACCATCAAGCTACCCGATTAATCCAGAGCTTTTCCTCATCCTTGA 2699 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACAAGCAAAACCAGACGAAGAAAAGCTGCACCGTAGGCTCATATTTGATCTTGCAAATGA 2759 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 ACTCCTCGCCCAGCAAATGGATGCCAACCACACTGTGAATTCATCAGTGCAGTTCTTTCA 2819 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GTCAAAGAAGTTAAGTGGGTGGCAACTTTTCAAGGACTTATGTGCAGAGATTGACATGAT 2879 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CCAGTCTCGGTCCTCAATGATAAGGTGCTCTGAAGAGGAAGATAGCAGGCTAGCAGAGGA 2939 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 TGCAATGCAAGGCATGAAAGAGTGGAAGAGCTCCGACAGTGAACGGCAAGGAATTGTTTT 2999 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GGCCATTGAAAAATCCATCTTTAAGGATCTTATTGATGAGATAATTAGTGGAGTAGACAA 3059 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 AGGGAAGGTGCACCTGACGCAATGGAAGCTAAGGAGGCAGCTGTCTTTCATCAGCATATA 3119 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 GGCCAAATTTCTGCTTCTTAGGAAGCTTAGCTAATGGTATATGTAACCGTTTTAAACTGG 3179 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CTATACAATCCATGAGTTAACTGACATATATATATCTACATGAGCAAGCAAACAGTAACA 3239 consensus_11048#1 ------------------------------------------------------------ consensus_11048#0 CTGAGATCTTGCCAACCAAAAAAAAAAATATCCAAAGATTCCCTCGAAGATG 3291 consensus_11048#1 ---------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||