Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 11052 cluster # 11052       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11052#0 length = 275 sequences # 8  

consensusID : consensus_11052#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 275
fasta sequence
                              [CTACGGTGTTTCATCCCGCCGAGATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGGCGTGGTGATGCTCGAG]

[+] EMBL CF339515             [CTACGGTGTTTCATCCCGCCGAGATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF339954             [ TACGGTGTTTCATCCCGCCGAGATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGGCGTGGTGATGCTCGAG]
[+] EMBL CF338257             [    GGTGTTTACTCCCGCCGAGATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF338461             [                       ATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF340083             [                       ATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF338858             [                       ATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF338423             [                       ATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCAATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]
[+] EMBL CF339395             [                       ATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGGAAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGCTGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTT ACCAATCGCAGTTG ACCGTGGTCCTGCTCTACGACCTGTCCTCGGCGCAGGACGATTTGCAGCTTCATTCGATCGCCCATGG                ]


>consensus_11052#0 CTACGGTGTTTCATCCCGCCGAGATGGAACTGGGCGAGACCACCAACCTGATTTTCAGGG AAGTCGAGCGCATCAACCCGTCGCGGGTGGTGCTCGACAGCCTCTCCGAACTGCGGCTGC TGGCGCAAAACCCGCTGCGCTACCGGCGCCAGGTCCTTGCCCTGAAGCATTTCTTCACCA ATCGCAGTTGCACCGTGGTCCTGCTCGACGACCTGTCCTCGGCGCAGGACGATTTGCAGC TTCATTCGATCGCCCATGGCGTGGTGATGCTCGAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)