These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11057#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1093 fasta sequence [GCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG-GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG-TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGAGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG-CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA-TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACCAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGCCTAAAAATAATTGAGGAACAAAAAAAAAAAAAAAAA] [+] EMBL AK102726 [GCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGAGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGT ] [+] EMBL AK069570 [ CCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGGGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTA ] [+] EMBL CA754627 [ TAGTCTTTCTCTCCTCTCGTCGCCNAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGTGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGC GGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGGGCCCGCGTGGGCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGAC GCGACCGGTGCGTGCCGCCCCA GTGAACCTGGGGTGGTCGACAGc ] [+] EMBL C73194 [ GTCTTTNTNTCCTCTCGTCGCCAAGCGAAG GGNACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCNACGGCNACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGAAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGGNAAGAGGTCGTTCCTCGGNTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTAC GNAACGACGACGACCTCCCCGATTTNGCGGAGGCTGATGTTTTNGTACGCGCCGTCNTCGGAGGGGGGCGCGGTTCATCGAGGCGGCGGCG ] [+] EMBL AU172650 [ GACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAAAAA ] [+] EMBL OSS14462A [ CGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACCAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGCCTAAAAATAA ] [+] EMBL AU101800 [ GAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACNAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGACTAAAAATAATTGAGGAACAAAAAAAAAAAAAAAAA] [+] EMBL CA766283 [ cgATTAGGATTTAATTTCTTCTCTTCTTCGATTTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAATTTTTGTAATATGGTTTAAATTTTGCTCTCTCTTTTTATCTTCTCATCAAGTTAATGAGAAAAGGGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAAnnnnn ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||