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Oryza sativa
cluster # 11057 cluster # 11057       Sequences # 8       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11057#0 length = 1093 sequences # 8  

consensusID : consensus_11057#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1093
fasta sequence
                              [GCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG-GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG-TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGAGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG-CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA-TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACCAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGCCTAAAAATAATTGAGGAACAAAAAAAAAAAAAAAAA]

[+] EMBL AK102726             [GCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGAGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGT                                                                                                                                                                              ]
[+] EMBL AK069570             [   CCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGCGGAGGGGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTA                                                                                                                                                                                                                            ]
[+] EMBL CA754627             [          TAGTCTTTCTCTCCTCTCGTCGCCNAGCGAAGCGAGACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGTGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGG GAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAGGCTGATG TCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGCGGC      GGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCACAAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCGGTGCAGGGGCCCGCGTGGGCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGAC       GCGACCGGTGCGTGCCGCCCCA GTGAACCTGGGGTGGTCGACAGc                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C73194               [            GTCTTTNTNTCCTCTCGTCGCCAAGCGAAG GGNACAGTCTCGTGCGCCTCCGGCTTTCCTCTCCNACGGCNACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGCGCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGAAGCAGCCGCAGGGCCCGTTCGCCGGCGGGGCCGCCGCCGGGNAAGAGGTCGTTCCTCGGNTTCCAGTACCACCACCACCACCGCGGCGGCTCCGTGGCGCCGGCCTAC GNAACGACGACGACCTCCCCGATTTNGCGGAGGCTGATGTTTTNGTACGCGCCGTCNTCGGAGGGGGGCGCGGTTCATCGAGGCGGCGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU172650             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GACCAGGCGGCGTTCGCGGAGGAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTGCCGCCGCACGTGTACCTGGCGCGG CGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGACGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAAAAA                                                                                                                                                       ]
[+] EMBL OSS14462A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACCAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGCCTAAAAATAA                          ]
[+] EMBL AU101800             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GAACCGGCTTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTCTTCTTCGA TTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTTGTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGAGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTTTCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACNAAAGATGGTTGGAATCTGATTATTATTCTTTTGTTAATTACTCTACTATAATATGTATGGACTAAAAATAATTGAGGAACAAAAAAAAAAAAAAAAA]
[+] EMBL CA766283             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        cgATTAGGATTTAATTTCTTCTCTTCTTCGATTTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAATTTTTGTAATATGGTTTAAATTTTGCTCTCTCTTTTTATCTTCTCATCAAGTTAATGAGAAAAGGGGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAAnnnnn                                                                                                                                                  ]


>consensus_11057#0 GCTCCACCACTAGTCTTTCTCTCCTCTCGTCGCCAAGCGAAGCGAGACAGTCTCGTGCGC CTCCGGCTTTCCTCTCCGACGGCGACGCGCCGACGTACGACGCCGTGGACGAGCAGCAGC GCTGTGGATCGACGAGCGGCGATGGCGAAGGCGCGGAAGCAGCAGCCGCAGGGCCCGTTC GCCGGCGGGGCCGCCGCCGGGGAGAGGTCGTTCCTCGGGTTCCAGTACCACCACCACCAC CGCGGCGGCTCCGTGGCGCCGGCCTACGGCGACGACGACGACCTCCCCGATTTGGCGGAG GCTGATGTCTGGTACGCGCCGTCGTCGGAGGGGGGCGCGGATCATCGAGGCGGCGGCGGC GGCGGAGGAGGAGGGGGAGGGCTGGAAATCGGCGGCGGCGGCTGGGGCGGAGGGAAGCAC AAGGTGGGCGGGCTGAGCCGGGCGTTCGCGGACGGGCGGCAGGTGGCGGCGTCGGCGCCG GTGCAGGTGCCCGCGTGGCCCGGCCGCTACGCCGACCCCGACCAGGCGGCGTTCGCGGAG GAGGAGAAGCGCCGCGAGGAGGAGGACGACGCCGGCGACGGCGACGGCGACGGGTGGGTG CCGCCGCACGTGTACCTGGCGCGGCGGCAGGCGAGGTCGTCGGTGGTGGAGGGCGTCGGA CGAACACTCAAGGGGCGCGACGCCTCCCGCGTCCGCGACGCCGTCTGGAGCCGAACCGGC TTCGACGGCTGAGCCAGATTAAACCGGGGAGACAAGCCAATTAGGATTTAATTTCTTCTC TTCTTCGATTTTTCCCCCTCTCCTAATTTTCTTCCTCTTAAATTTTTGTGAAAAAATTTT GTAATATGGTTTAAATTTTGCTCTCTCGTTTTATCTTCTCATCAAGTTAATGAGAAAAGA GGAAAAGCGTGTGGTATGTAGCATAGTGCATTGGTTGAATAATCTTCTTCTTTCTCTCTT TCTTGTTGATTGGGTGGTGGTTGGGCAGCTTCAACCAAAGATGGTTGGAATCTGATTATT ATTCTTTTGTTAATTACTCTACTATAATATGTATGGCCTAAAAATAATTGAGGAACAAAA AAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)