These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11060#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1943 fasta sequence [TGTTTGTCCTGCTGCTTCAGAGTTCAGCTGCATCCCCGTGAACACATCCTCCGCCGCCGCCGCCGCCGATCTCCATCCATCCCACGAGCGAGCAGGGGTGTCGTCGTTCGTCCTACCGCTTCCGCCGCATCCTGATTTTGATTTGGCACTTGAAGCTTGTGTCAGCACACAAGGTAAAGATCCTAGGTGTATCCGCCACTGGCCGGGGTGGATCTGGTACGACGCAGATACCCCCACCAGCACAGATTTCGCAACAACAGAGAAGAGCGAGGTGGGGCAATGGAACAAGAAGCAGTGACAGCTTTGGTGGCCGATCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTCGAGGAAATCCTCCATCAAGACCCCCTCATAGATGAAGTGGGGTTCTTGCACCCAACATAGTTCCAGTCGCTAGAACACAGCCAAACTGGTTATTGGACATCTCAAGCACCTGAATGTCCTCGGAGATACCTCTGGTGCAAAGACCACAAGCTTGCCATATCCATGGAAATCCTACCTAAGCTCTACCGTGCTGCACGGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTCCACTCATGGAAATTGATCTGATGAGGCACAGCAAGGCATTGCTCATTCTTTGCCCTGACATGCTCACTGCATGGAATTCGAGGAAGATGGTACTATCAGTGAATTATGATTTCACTAAACTCAAGGATGAGCTGCAATTGTGTGCCTTGATCCTTTCATGCTCACCAAAAAACGAAAGCACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAACACAACCAGGATGTGTCGGAGCTTATAGAGAGGGAATCTGTACTAGTGAAAGAGATAGCAGAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGTATGTTGTATTTCATTAGAATCTATACCTGCTTCACTATGGTTCCCCTTGTGCCATCTTTCCCTCTGTTTTTCATTGTACATCTGTTACAAAGGAGAAACTCGCCTGTGCATTTTTTTTCGGGAATACGCAAGGAGCGCTCGCCTGTGCATTTTGTTTTATTTCACAAACATTGATTTCTCTGGTGCTTGAGTAATTGCATCTGACAGGAGGAACTGACGTGGAATCAGATGCTTATCAGACGCTACCAAGGGAGAGAGGTTTGAAGTTTGGCCATCGTGATTCTGACATTTTATCCATAATTTATTGTGTATGTTGTTCCCTTGCGTTGATTGTGCTGATTCGTTGGTGTAGTCTTTGTGGATCCATCGTATTTTCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGAATGCTCCTGCCGATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACATTCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAAGGACATGCATTGCAGCATACGTACAGAGTTACTGATGAAACGACGACATATGGTTATCTAGTACTGTAGCCTGTATGGTCTAATATGTTCATTGTTCTGCTTTTCTGTTGCAGTCTTCTTTATGTAGTGGAAATACTGAAGAAATGGCTATG] [+] EMBL AK073525 [TGTTTGTCCTGCTGCTTCAGAGTTCAGCTGCATCCCCGTGAACACATCCTCCGCCGCCGCCGCCGCCGATCTCCATCCATCCCACGAGCGAGCAGGGGTGTCGTCGTTCGTCCTACCGCTTCCGCCGCATCCTGATTTTGATTTGGCACTTGAAGCTTGTGTCAGCACACAAGGTAAAGATCCTAGGTGTATCCGCCACTGGCCGGGGTGGATCTGGTACGACGCAGATACCCCCACCAGCACAGATTTCGCAACAACAGAGAAGAGCGAGGTGGGGCAATGGAACAAGAAGCAGTGACAGCTTTGGTGGCCGATCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTCGAGGAAATCCTCCATCAAGACCCCCTCATAGATGAAGTGGGGTTCTTGCACCCAACATAGTTCCAGTCGCTAGAACACAGCCAAACTGGTTATTGGACATCTCAAGCACCTGAATGTCCTCGGAGATACCTCTGGTGCAAAGACCACAAGCTTGCCATATCCATGGAAATCCTACCTAAGCTCTACCGTGCTGCACGGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTCCACTCATGGAAATTGATCTGATGAGGCACAGCAAGGCATTGCTCATTCTTTGCCCTGACATGCTCACTGCATGGAATTCGAGGAAGATGGTACTATCAGTGAATTATGATTTCACTAAACTCAAGGATGAGCTGCAATTGTGTGCCTTGATCCTTTCATGCTCACCAAAAAACGAAAGCACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAACACAACCAGGATGTGTCGGAGCTTATAGAGAGGGAATCTGTACTAGTGAAAGAGATAGCAGAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGTATGTTGTATTTCATTAGAATCTATACCTGCTTCACTATGGTTCCCCTTGTGCCATCTTTCCCTCTGTTTTTCATTGTACATCTGTTACAAAGGAGAAACTCGCCTGTGCATTTTTTTTCGGGAATACGCAAGGAGCGCTCGCCTGTGCATTTTGTTTTATTTCACAAACATTGATTTCTCTGGTGCTTGAGTAATTGCATCTGACAGGAGGAACTGACGTGGAATCAGATGCTTATCAGACGCTACCAAGGGAGAGAGGTTTGAAGTTTGGCCATCGTGATTCTGACATTTTATCCATAATTTATTGTGTATGTTGTTCCCTTGCGTTGATTGTGCTGATTCGTTGGTGTAGTCTTTGTGGATCCATCGTATTTTCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGAATGCTCCTGCCGATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACATTCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAAGGACATGCATTGCAGCATACGTACAGAGTTACTGATGAAACGACGACATATGGTTATCTAGTACTGTAGCCTGTATGGTCTAATATGTTCATTGTTCTGCTTTTCTGTTGCAGTCTTCTTTATGTAGTGGAAATACTGAAGAAATGGCTATG] consensusID : consensus_11060#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1895 fasta sequence [GCGGGGGCACGCCGCACGGGCACCACCTCGCCGCCCGCCACCACCGCTTCCTCACCCGCCGCAGCCACCGCCTCCACCTCCTCCTCCTCCACCACCTTCCTAGCCCTGCTGCCGCTTCTCGTACTCTCCATCCCCGTAGTCGGCATCCGTGCGGCCTCAGCACACCTCCTCCATCTCCCAGATGGCCACATGACTACACAGTGGCGCTCAGCCACGTCTCCCCTCCCCTACGGCAAGTTCAGAGAAGACGGAGCTGGGGGTAGGCCGGCAACGAGTCGCCATCTCCTCCCCACGAGCCCACGCCTCCCCGCCTCAGCCGCCGCGGCCCACCACTCCGGCTTCCACCTCAGATCGCGAATCGCAAGACTTTGATTTGGCACTTGAGGCGTCAGAACACAAAGGGTAAAGATCCTCGGTTTGCCACTGGCTGGGGTGGATCTGGTGTGACGCAGATACCCCAAAGCACTGAGAAGCCATTGAGGAAGCTCACTCTTGAGGACACGCGCCCCTTTGGCTGCACTAGCACAGATTTCACAAGAACAGAGAAGAGTGAGGAGAGCAATGGAACAAGAAGCAGCAACAGCTTTGGCAGCCAAGCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTTGAGCAAATCCTCCATCAAGATTCCCTCATAGATGAAGTGGGGTTCTTGCACCCGACACAGTTCCAGTCACTAGAACACAGCCAGACTAGTAATTGGACATTTGAAGTACCTGAATGTCCTCAGAGATACCTGTGGTGCAAAGACCATAAGCTTGCCATATCCACGGAAATCTTACCTAAGCTCTACCGTGCTGCACAGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTTCATTCATGGAAACTGATCTGATGAGGCACAGCAAGGCACTGCTCATTCTTTGCCCTGACATGCTCACCGCATGGAACTCAAGGAAGATAGTGCTATCAGTGAATTATGATTTCACTAAGCTCAAGGATGAGCTGCAATTGTGTGCTCTGATCCTTTCATACTCACCAAAAAACGAAAGCACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAGCACAACCAGGATGTGTCGGAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGAGGAACTGACGTGGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGACTAGACATTTTG] [+] EMBL AK106529 [GCGGGGGCACGCCGCACGGGCACCACCTCGCCGCCCGCCACCACCGCTTCCTCACCCGCCGCAGCCACCGCCTCCACCTCCTCCTCCTCCACCACCTTCCTAGCCCTGCTGCCGCTTCTCGTACTCTCCATCCCCGTAGTCGGCATCCGTGCGGCCTCAGCACACCTCCTCCATCTCCCAGATGGCCACATGACTACACAGTGGCGCTCAGCCACGTCTCCCCTCCCCTACGGCAAGTTCAGAGAAGACGGAGCTGGGGGTAGGCCGGCAACGAGTCGCCATCTCCTCCCCACGAGCCCACGCCTCCCCGCCTCAGCCGCCGCGGCCCACCACTCCGGCTTCCACCTCAGATCGCGAATCGCAAGACTTTGATTTGGCACTTGAGGCGTCAGAACACAAAGGGTAAAGATCCTCGGTTTGCCACTGGCTGGGGTGGATCTGGTGTGACGCAGATACCCCAAAGCACTGAGAAGCCATTGAGGAAGCTCACTCTTGAGGACACGCGCCCCTTTGGCTGCACTAGCACAGATTTCACAAGAACAGAGAAGAGTGAGGAGAGCAATGGAACAAGAAGCAGCAACAGCTTTGGCAGCCAAGCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTTGAGCAAATCCTCCATCAAGATTCCCTCATAGATGAAGTGGGGTTCTTGCACCCGACACAGTTCCAGTCACTAGAACACAGCCAGACTAGTAATTGGACATTTGAAGTACCTGAATGTCCTCAGAGATACCTGTGGTGCAAAGACCATAAGCTTGCCATATCCACGGAAATCTTACCTAAGCTCTACCGTGCTGCACAGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTTCATTCATGGAAACTGATCTGATGAGGCACAGCAAGGCACTGCTCATTCTTTGCCCTGACATGCTCACCGCATGGAACTCAAGGAAGATAGTGCTATCAGTGAATTATGATTTCACTAAGCTCAAGGATGAGCTGCAATTGTGTGCTCTGATCCTTTCATACTCACCAAAAAACGAAAGCACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAGCACAACCAGGATGTGTCGGAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGAAATCAAAGATGAACTACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGAGGAACTGACGTGGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGACTAGACATTTTG] [+] EMBL OSS13155A [ CCACATGACTACACAGTGGCGCTCAG CACGTCTCCCCTCCCCTACGGCAAGTTCAGAGAAGACGGAGCTGGGGGTAGGCCGGCAACGAGTCGCCATCTCCTCCCCACGAGCCCACGCCTCCCCGCCTCAGCCGCCGCGGCCCACCACTCCGGCTTCCACCTCAGATTGCGAATCGCAAGACTTTGATTTGGCACTTGAGGCGTCAGAACACAAAGGGTAAAGATCCTCGGTTTGCCACTGGCTGGGGTGGATCTGGTGTTACGCAGATACCCCAAAGCACTTAGAAGNCATTNAGGGAGCTCACTC ] [-] EMBL CB677951 [ GAGCACAACCAGGATGTGTCGGAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGAAATCAAAGATGAACTNCCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCCCTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGAGGAACTGACGTGGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAAGGACGCTTGGAATACAACCATTTCTGA ] consensusID : consensus_11060#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 556 fasta sequence [ATCAGGCGCTACCAAGGGAGAGAGGTTTGAAGTTTGCCCATCATGATTGTGACATTTTTATGTTAGTGCCATAATTTCTAGTGAATGTTGTTCCCCTATGTTGATTGTNCTAGTGTGTTGGTGTAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTNGATATCAAAGCAAGTTCCGGCTGTG-AACTAAAGCTTGGAGGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTTTTAGCAAGGGCCTNCCCGAGGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGTGATACAAAAAAAAAAAA] [+] EMBL OSC0821 [ATCAGGCGCTACCAAGGGAGAGAGGTTTGAAGTTTGCCCATCATGATTGTGACATTTTTATGTTAGTGCCATAATTTCTAGTGAATGTTGTTCCCCTATGTTGATTGTNCTAGTGTGTTGGTGTAGTCTTTGTGGATCCATCGTAGGTTCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTGCCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTNGATATCAAAGCAAGTTCCGGCTGTG AACTAAAGCTTGGAGGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTTTTAGCAAGGGCCTNCCCGAG ] [+] EMBL AU161728 [ CAGAGTGTGCTGCAGGCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGAATGCCCCTG CCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGC TGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGTGATACAAAAAAAAAAAA] consensusID : consensus_11060#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 391 fasta sequence [AATCAGATGCTTATCAGACGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTATTTTCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGAATGCTCCTGCCGATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACATTCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAAGGACATGCATTGCAGCATACGTACAGAGGTTACT] [+] EMBL OS2048A [AATCAGATGCTTATCAGACGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTATTTTCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAGGCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGAATGCTCCTGCCGATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACATTCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAAGGACATGCATTGCAGCATACGTACAGAGGTTACT] consensusID : consensus_11060#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 290 fasta sequence [ATGAATTTGGTGAGGCATNTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGAAAAAAAAAAA] [+] EMBL AU101760 [ATGAATTTGGTGAGGCATNTGTCCAATCTGAACTTGCAGCCCTCTACATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACATTCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCGGAGAGAAGTAGATTGTGGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATGTGGTACTCATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11060#0 TGTTTGTCCTGCTGCTTCAGAGTTCAGCTGCATCCCCGTGAACACATCCTCCGCCGCCGC 60 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 ------------------------GCGGGGGCACGCCGCACGGGCACCACCTCGCCGCCC 36 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CGCCGCCGATCTCCATCCATCCCACGAGCGAGCAGGGGTGTCGTCGTTCGTCCTACCGCT 120 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 GCCACCACCGCTTCCTCACCCGCCGCAGCCACCGCCTCCACCTCCTCCTCCTCCACCACC 96 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TCCGCCGCATCCTGATTTTGATTTGGCACTTGAAGCTTGTGTCAGCACACAAGGTAAAGA 180 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TTCCTAGCCCTGCTGCCGCTTCTCGTACTCTCCATCCCCGTAGTCGGCATCCGTGCGGCC 156 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TCCTAGGTGTATCCGCCACTGGCCGGGGTGGATCTGGTACGACGCAGATACCCCCACCAG 240 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TCAGCACACCTCCTCCATCTCCCAGATGGCCACATGACTACACAGTGGCGCTCAGCCACG 216 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CACAGATTTCGCAACAACAGAGAAGAGCGAGGTGGGGCAATGGAACAAGAAGCAGTGACA 300 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TCTCCCCTCCCCTACGGCAAGTTCAGAGAAGACGGAGCTGGGGGTAGGCCGGCAACGAGT 276 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GCTTTGGTGGCCGATCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCACCACTTC 360 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CGCCATCTCCTCCCCACGAGCCCACGCCTCCCCGCCTCAGCCGCCGCGGCCCACCACTCC 336 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GAGGAAATCCTCCATCAAGACCCCCTCATAGATGAAGTGGGGTTCTTGCACCCAACATAG 420 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 GGCTTCCACCTCAGATCGCGAATCGCAAGACTTTGATTTGGCACTTGAGGCGTCAGAACA 396 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TTCCAGTCGCTAGAACACAGCCAAACTGGTTATTGGACATCTCAAGCACCTGAATGTCCT 480 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CAAAGGGTAAAGATCCTCGGTTTGCCACTGGCTGGGGTGGATCTGGTGTGACGCAGATAC 456 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CGGAGATACCTCTGGTGCAAAGACCACAAGCTTGCCATATCCATGGAAATCCTACCTAAG 540 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CCCAAAGCACTGAGAAGCCATTGAGGAAGCTCACTCTTGAGGACACGCGCCCCTTTGGCT 516 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CTCTACCGTGCTGCACGGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGTCCACTC 600 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 GCACTAGCACAGATTTCACAAGAACAGAGAAGAGTGAGGAGAGCAATGGAACAAGAAGCA 576 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 ATGGAAATTGATCTGATGAGGCACAGCAAGGCATTGCTCATTCTTTGCCCTGACATGCTC 660 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 GCAACAGCTTTGGCAGCCAAGCAAGAGGAAGTGGCGCAGCTCGGGGAGGGTATCCTCCAC 636 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 ACTGCATGGAATTCGAGGAAGATGGTACTATCAGTGAATTATGATTTCACTAAACTCAAG 720 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CACTTTGAGCAAATCCTCCATCAAGATTCCCTCATAGATGAAGTGGGGTTCTTGCACCCG 696 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GATGAGCTGCAATTGTGTGCCTTGATCCTTTCATGCTCACCAAAAAACGAAAGCACCTGG 780 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 ACACAGTTCCAGTCACTAGAACACAGCCAGACTAGTAATTGGACATTTGAAGTACCTGAA 756 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 AGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAACACAACCAGGATGTGTCGGAGCTT 840 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TGTCCTCAGAGATACCTGTGGTGCAAAGACCATAAGCTTGCCATATCCACGGAAATCTTA 816 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 ATAGAGAGGGAATCTGTACTAGTGAAAGAGATAGCAGAGAAATCAAAGATGAACTACCGT 900 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CCTAAGCTCTACCGTGCTGCACAGCATGCATACTCCAATTCAGCAGCAGCCAAGGATGGT 876 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTGAATGAG 960 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TCATTCATGGAAACTGATCTGATGAGGCACAGCAAGGCACTGCTCATTCTTTGCCCTGAC 936 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTTCACTAC 1020 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 ATGCTCACCGCATGGAACTCAAGGAAGATAGTGCTATCAGTGAATTATGATTTCACTAAG 996 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAAGATTCC 1080 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 CTCAAGGATGAGCTGCAATTGTGTGCTCTGATCCTTTCATACTCACCAAAAAACGAAAGC 1056 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CTTGATAGGAAGTCAGAAGTTCATTTACTGTGGAAGGTATGTTGTATTTCATTAGAATCT 1140 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 ACCTGGAGCCATAGGAGATGGGTGATCAAGAAGGTTTCAGAGCACAACCAGGATGTGTCG 1116 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 ATACCTGCTTCACTATGGTTCCCCTTGTGCCATCTTTCCCTCTGTTTTTCATTGTACATC 1200 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 GAGCTTATAGAGATGGAATCTGTACTAGTGAAACAGATAGCAGAGAAATCAAAGATGAAC 1176 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TGTTACAAAGGAGAAACTCGCCTGTGCATTTTTTTTCGGGAATACGCAAGGAGCGCTCGC 1260 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 TACCGTGCGTGGAGGCATCGCTGCTGGCTTATTCCCTACATGACAAGAGAACAGGTTCTG 1236 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 CTGTGCATTTTGTTTTATTTCACAAACATTGATTTCTCTGGTGCTTGAGTAATTGCATCT 1320 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 ------------------------------------------------------------ consensus_11060#1 AATGAGTTAAAGAAATCAACAAGATGGAACGAGTTACATGTCGCTGACAACTGTTGTTTT 1296 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GACAGGAGGAACTGACGTGGAATCAGATGCTTATCAGACGCTACCAAGGGAGAGAGGTTT 1380 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 --------------------------------ATCAGGCGCTACCAAGGGAGAGAGGTTT 28 consensus_11060#1 CACTACCGACGGTCCCTACTGCTTGCATTACTAGACAGTTGCCATGTAGAGGACACAGAA 1356 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GAAGTTTGGCCATCGTGATTCTGACATTTTAT--------CCATAATTTATTGTGTATGT 1432 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 GAAGTTTGCCCATCATGATTGTGACATTTTTATGTTAGTGCCATAATTTCTAGTGAATGT 88 consensus_11060#1 GATTCCCTTGATAGGAAGTCAGAAGTTCATTT-----ACTGTGGAAGGAGGAACTGACGT 1411 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TGTTCCCTTGCGTTGATTGTGCTGATTCGTTGGTGTAGTCTTTGTGGATCCATCGTATTT 1492 consensus_11060#3 -AATCAGATGCTTATCAGACGCT-ACCAAGGGAGAGAGTCTTTGTGGATCCATCGTATTT 58 consensus_11060#2 TGTTCCCCTATGTTGATTGTNCTAGTGTGTTGGTGTAGTCTTTGTGGATCCATCGTAGGT 148 consensus_11060#1 GGAATGAGAAACTTATCAGGCGCTACCAAGGGAGAGAGTCTTTGTGGATCCATCGTAGGT 1471 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 TCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAG 1552 consensus_11060#3 TCCTCTCGCAATGGTGGGTGAAGTTCTCGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAG 118 consensus_11060#2 TCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAG 208 consensus_11060#1 TCCTCTCACAATGGTGGATGAAGTTCTTGCTCAGCAGTGAGGAAACAGAGTGTGCTGCAG 1531 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 GCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGA 1612 consensus_11060#3 GCACTTCGCTGGTGGACCTCTTCCTAGCCCAGGAGATATACCTCCTGTCAGACCGCCTGA 178 consensus_11060#2 GCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGA 268 consensus_11060#1 GCACATCGCTGGTGGATCTCTTCCTAGTCCAGGAGATATACCTCCTGTCAGACTGCCTGA 1591 consensus_11060#4 ------------------------------------------------------------ consensus_11060#0 ATGCTCCTGCC-GATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTAC 1671 consensus_11060#3 ATGCTCCTGCC-GATGAATTTGGTGAGGCATGTGTTCAAACTGAGCTTGCAGCCCTCTAC 237 consensus_11060#2 ATGCCCCTGCCCGATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTAC 328 consensus_11060#1 ATGCCCCTGCC-GATGAATTTGGTGAGGCATGTGTCCAATCTGAACTTGCAGCCCTCTAC 1650 consensus_11060#4 -------------ATGAATTTGGTGAGGCATNTGTCCAATCTGAACTTGCAGCCCTCTAC 47 ****************** *** *** **** *************** consensus_11060#0 ATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACAT 1731 consensus_11060#3 ATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAAAAAGGCTACAT 297 consensus_11060#2 ATTCTCTNGATATCAAAGCAAGTTCCGGCTGTGAACTAAAGCTTGGAGGAAAGGCTACAT 388 consensus_11060#1 ATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACAT 1710 consensus_11060#4 ATTCTCTGGATATCAAAGCAAGTTCCGGCTGTGAAACTAAAGCTGGAAGAAAGGCTACAT 107 ******* *************************** ** **** *********** consensus_11060#0 TCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAA 1791 consensus_11060#3 TCGGTGGGGAGCCTGGAGGATGTCTTAGCAAGGGCCTGCCCACTATTGAAAGCAGAACAA 357 consensus_11060#2 TCGTTGGGGAGCCTGGAGGATGTTTTAGCAAGGGCCTNCCCG--AGGAGAAGTAGATTGT 446 consensus_11060#1 TCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCG--GAGAGAAGTAGATTGT 1768 consensus_11060#4 TCGTTGGGGAGCCTGGAGGATGTGTTAGCAAGGGCCTGCCCG--GAGAGAAGTAGATTGT 165 *** ******************* ************* *** *** *** consensus_11060#0 GGACATGCATTGCAGCATACGTACAGAG-TTACTGATGAAACG-ACGACATATGGTTATC 1849 consensus_11060#3 GGACATGCATTGCAGCATACGTACAGAGGTTACT-------------------------- 391 consensus_11060#2 GGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATG 506 consensus_11060#1 GGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATG 1828 consensus_11060#4 GGACGCATTTGATAGCTTGACTATTGAAAGCAGAACAAGGACATGCATTGTAGCAATATG 225 **** * *** * ** ** * consensus_11060#0 TAGTACTGTAGCCTGTATGGTCTAATATGTTCATTGTTCTGCTTTTCTGTTGCAGTCTTC 1909 consensus_11060#3 ------------------------------------------------------------ consensus_11060#2 TGGTACT----CATATCCAACGGAAAACGACGCTTGTGATACAAAAAAAAAAAA------ 556 consensus_11060#1 TGGTACT----CATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGAC 1884 consensus_11060#4 TGGTACT----CATATCCAACGGAAAACGACGCTTGGAATACAACCATTTCTGAGGCGAA 281 consensus_11060#0 TTTATGTAGTGGAAATACTGAAGAAATGGCTATG 1943 consensus_11060#3 ---------------------------------- consensus_11060#2 ---------------------------------- consensus_11060#1 TAGACATTTTG----------------------- 1895 consensus_11060#4 AAAAAAAAA------------------------- 290 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||