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Oryza sativa
cluster # 11066 cluster # 11066       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11066#0 length = 1267 sequences # 5  
consensus_11066#1 length = 793 sequences # 1  
consensus_11066#2 length = 474 sequences # 1  
consensus_11066#3 length = 126 sequences # 1  

consensusID : consensus_11066#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1267
fasta sequence
                              [TCTCTCCTCCCCCGTCCCTATCCCCTTCGCCCTTCGTCGTCGTCGTCGTCGTCGTTCGTCCCAATCTCCGCATCCCTCCATTCCCCCCTCCTCCTCGATGGCTCGCCTCCTCGCGCAAACCCTAACCCTAACCCTAGCCCGCCCGGCTGCGGCGGCGGCGGCGCCCCTCCTCCCTCTCCGCGGCCTCGCCACCAAGGTCGAGGTCATCGAGATCGACCTCGCCGAGGACGACGACTCCTCCGCCTCCACCTCGGGCCCCGCCTCCTCCCCCGCGTCGGTGGAGGTGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTGTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAAGAAGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATGACCAATGTACATATGGATGACGGCAAGGACCCAAGTGCTAATTAATCACCCCACCCCTTGCACTATGAAGATAATCTGTTGCAACTGCTATGATTGGGTTGC-AATCTGTATATTTCACTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAATAAAACA-TGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATGGAACACTAGCTGGAATCCAACAAGGACTGTGGATGGCTCTTTGTGCCAAGAAAAAAAAAAAGAATGTTTGCAAAGCGCTGAGATAA-AAACATCTACTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCA-ACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTTAAAAAAAAAAATGCCTCATCTATAAGAGAGAGCTGCTGTCAAGTGAGCATATGAATGTAAAAAAAAAAA]

[+] EMBL AK067127             [TCTCTCCTCCCCCGTCCCTATCCCCTTCGCCCTTCGTCGTCGTCGTCGTCGTCGTTCGTCCCAATCTCCGCATCCCTCCATTCCCCCCTCCTCCTCGATGGCTCGCCTCCTCGCGCAAACCCTAACCCTAACCCTAGCCCGCCCGGCTGCGGCGGCGGCGGCGCCCCTCCTCCCTCTCCGCGGCCTCGCCACCAAGGTCGAGGTCATCGAGATCGACCTCGCCGAGGACGACGACTCCTCCGCCTCCACCTCGGGCCCCGCCTCCTCCCCCGCGTCGGTGGAGGTGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTGTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAAGAAGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATGACCAATGTACATATGGATGACGGCAAGGACCCAAGTGCTAATTAATCACCCCACCCCTTGCACTATGAAGATAATCTGTTGCAACTGCTATGATTGGGTTGC AATCTGTATATTTCACTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAATAAAACA TGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATGGAACACTAGCTGGAATCCAACAAGGACTGTGGATGGCTCTTTGTGCCAAGAAAAAAAAAAAGAATGTTTGCAAAGCGCTGAGATAA AAACATCTACTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCA ACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTAC                                                                                ]
[+] EMBL C72894               [                                                                                                                                                                                                                 AGATCGACCTCGCCGAGGACGACGACTCCTCCGCCTCCACCTCGGGCNCCGCCTCCTCCCCCGCGTCGGTGGAGGTGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCNNCCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAAGTGGTGGCCGGAAGGCTCGCGTACGA CCGGAAGTGTACGCGCCCATGACGGAAGAAGANGCG TCTCCTTCTTCAACGCGCGGGGCTGGCCGTCG  CTTCTAat                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU172541             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGTCGAAGGGAAATTCCCACATACCAAGAAGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATGACCAATGTACATATGGATGACGGCAAGGACCCAAGTGCTAATTAATCACCCCACCCCTTGCACTATGAAGATAATCTGTTGCAACTGCTATGATTGGGTTGC AATCTGTATATTTCACTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAATAAAACA TGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATGGAACACTAGCTGGAATCCAACAAGGACTGTGGATGGCTCTTTGTGCCAAGAAAAA                                                                                                                                                                                                                                                              ]
[+] EMBL CA756068             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGCTCCATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATGACCAATGTACATATGGATGACGGCAAGGACCCAAGTGCTAATTAATCACCCCACCCCTTGCACTATGAAGATAATCTGTTGCAACTGCTATGATTGGGTTGC AATCTGTATATTTCACTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAATAAAACA TGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATGGAACACTAGCTGGAATCCAACAAGGACTGTGGATGGCTCTTTGTGCCAAGAAAAAAAAAAAGAATGTTTGCAAAGCGCTGAGATAA AAACATCTACTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAANAGGTCA ACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCANATTTGATTACATTCTAAATTTAAAAAAAAA                                                            ]
[+] EMBL BI811897             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATT GGTTCCAAATCTGTATATTTCACTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAATAAAACACTGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATGGAACACTAGCTGGAATCC ACAAGGACTGTGGATGGCTCTTTGTGCCAAG GAAAAAAAAAGAATGTTTGCAAAGCGCTGAGATAAGAAACATCTGCTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCACACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTTATAGCTGGGAATGCCTCATCTATAAGAGAGAGCTGCTGTCAAGTGAGCATATGAATGTAAAAAAAAAAA]


>consensus_11066#0 TCTCTCCTCCCCCGTCCCTATCCCCTTCGCCCTTCGTCGTCGTCGTCGTCGTCGTTCGTC CCAATCTCCGCATCCCTCCATTCCCCCCTCCTCCTCGATGGCTCGCCTCCTCGCGCAAAC CCTAACCCTAACCCTAGCCCGCCCGGCTGCGGCGGCGGCGGCGCCCCTCCTCCCTCTCCG CGGCCTCGCCACCAAGGTCGAGGTCATCGAGATCGACCTCGCCGAGGACGACGACTCCTC CGCCTCCACCTCGGGCCCCGCCTCCTCCCCCGCGTCGGTGGAGGTGGTCGGGGTCAGGCG CCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTT CGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCT CGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCT CGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTGTCCTTCTCCAC CGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAAGAA GAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCC ATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATG ACCAATGTACATATGGATGACGGCAAGGACCCAAGTGCTAATTAATCACCCCACCCCTTG CACTATGAAGATAATCTGTTGCAACTGCTATGATTGGGTTGCAATCTGTATATTTCACTC AGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGTAAT AAAACATGGAGGGAGAAGCTGGATGCTTGTGTTTGTGTTCTGCAACAGCCATAGAAAATG GAACACTAGCTGGAATCCAACAAGGACTGTGGATGGCTCTTTGTGCCAAGAAAAAAAAAA AGAATGTTTGCAAAGCGCTGAGATAAAAACATCTACTTCCATCTCCAGTCTTGAATTTGT TTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCAA CTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTTAA AAAAAAAAATGCCTCATCTATAAGAGAGAGCTGCTGTCAAGTGAGCATATGAATGTAAAA AAAAAAA



consensusID : consensus_11066#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 793
fasta sequence
                              [TGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTCTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAGGATGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAATGCTTCTACAAGAAAAAGTTGTCATGGTTACACGTGTCAGCTATGACCAAGCACATTATGGATACTGGCAGGACCCGAGTGCTATTTAATATGAGACTCCGTATTCTATTAAGATTATATGGTCTAGTGCATCATTTGGAAGCATCTTGTTTGAAACACGAAACTGCTAGTTATATTTATATAGCTCAAAATCTTGTCTATTTTAGATTCTTCATATGGTATATATAATATATTTAGTAATGTGAGAATGCATCATATATATTCAATGTTAATTATTTAATATTGTGGATAATGCTGTAATGAGACATGAGAATGATTGTTATATGATGAGTCTAGATGTAGTAAAGGTAAGTACAGAAGTGTTATTATACTATGCTGATATGTGAAATCTATATTCTGANAC]

[+] EMBL AW155007             [TGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTCTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAGGATGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAATGCTTCTACAAGAAAAAGTTGTCATGGTTACACGTGTCAGCTATGACCAAGCACATTATGGATACTGGCAGGACCCGAGTGCTATTTAATATGAGACTCCGTATTCTATTAAGATTATATGGTCTAGTGCATCATTTGGAAGCATCTTGTTTGAAACACGAAACTGCTAGTTATATTTATATAGCTCAAAATCTTGTCTATTTTAGATTCTTCATATGGTATATATAATATATTTAGTAATGTGAGAATGCATCATATATATTCAATGTTAATTATTTAATATTGTGGATAATGCTGTAATGAGACATGAGAATGATTGTTATATGATGAGTCTAGATGTAGTAAAGGTAAGTACAGAAGTGTTATTATACTATGCTGATATGTGAAATCTATATTCTGANAC]


>consensus_11066#1 TGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGC CCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCC ACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGG TGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGG CGCTCTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAAT TCCCACATACCAGGATGAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCT GATTGGCTAATGCTCCATTGCCAAGGGGAATGCTTCTACAAGAAAAAGTTGTCATGGTTA CACGTGTCAGCTATGACCAAGCACATTATGGATACTGGCAGGACCCGAGTGCTATTTAAT ATGAGACTCCGTATTCTATTAAGATTATATGGTCTAGTGCATCATTTGGAAGCATCTTGT TTGAAACACGAAACTGCTAGTTATATTTATATAGCTCAAAATCTTGTCTATTTTAGATTC TTCATATGGTATATATAATATATTTAGTAATGTGAGAATGCATCATATATATTCAATGTT AATTATTTAATATTGTGGATAATGCTGTAATGAGACATGAGAATGATTGTTATATGATGA GTCTAGATGTAGTAAAGGTAAGTACAGAAGTGTTATTATACTATGCTGATATGTGAAATC TATATTCTGANAC



consensusID : consensus_11066#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 474
fasta sequence
                              [GAAGATAATCTTGTTTGCCACTGGCTTATGAATTGGGTTCCACATCCTGGTATAATTTCACCTCCACGAAACTTGTTAGTTGTTTATTTGTAATCGAACCACACCCCCTTGTTGCCCATTAACCCTTGGGTTTCACCGGTTAAATAAAAACCATGGGAAGGGGAGAAACCTTGGAATGCTTTGTTTTTGTGGTTTCTGCCAACAAGCCCATTAAGAAAAATGGGAACACCTAGCTGGGAATCCCAACACAGGACCTGTTGGGATGGCTCTTTTGTGCCACAGGAAAAAAAAAGAATGTTTGCACAAGCGCTGAGATAAAAACATCTGCTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCAACTGTATGTGCATTTGGTGGACCTGGCCTGCGAAGCCAATTTGATTACATTCTAAAAAAAAAA]

[+] EMBL BI812409             [GAAGATAATCTTGTTTGCCACTGGCTTATGAATTGGGTTCCACATCCTGGTATAATTTCACCTCCACGAAACTTGTTAGTTGTTTATTTGTAATCGAACCACACCCCCTTGTTGCCCATTAACCCTTGGGTTTCACCGGTTAAATAAAAACCATGGGAAGGGGAGAAACCTTGGAATGCTTTGTTTTTGTGGTTTCTGCCAACAAGCCCATTAAGAAAAATGGGAACACCTAGCTGGGAATCCCAACACAGGACCTGTTGGGATGGCTCTTTTGTGCCACAGGAAAAAAAAAGAATGTTTGCACAAGCGCTGAGATAAAAACATCTGCTTCCATCTCCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCAACTGTATGTGCATTTGGTGGACCTGGCCTGCGAAGCCAATTTGATTACATTCTAAAAAAAAAA]


>consensus_11066#2 GAAGATAATCTTGTTTGCCACTGGCTTATGAATTGGGTTCCACATCCTGGTATAATTTCA CCTCCACGAAACTTGTTAGTTGTTTATTTGTAATCGAACCACACCCCCTTGTTGCCCATT AACCCTTGGGTTTCACCGGTTAAATAAAAACCATGGGAAGGGGAGAAACCTTGGAATGCT TTGTTTTTGTGGTTTCTGCCAACAAGCCCATTAAGAAAAATGGGAACACCTAGCTGGGAA TCCCAACACAGGACCTGTTGGGATGGCTCTTTTGTGCCACAGGAAAAAAAAAGAATGTTT GCACAAGCGCTGAGATAAAAACATCTGCTTCCATCTCCAGTCTTGAATTTGTTTCCATAT AAAACTGCATGTTGTAATGTCATATTTGACTTGTTGAGACCTAAAAGGTCAACTGTATGT GCATTTGGTGGACCTGGCCTGCGAAGCCAATTTGATTACATTCTAAAAAAAAAA



consensusID : consensus_11066#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 126
fasta sequence
                              [GTTTCCATATAAAACTGCATGAAGAACCGCCATATTTGACTTGTTGAGACCTACAGGGTCAACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTTGAAAAA]

[+] EMBL CF336451             [GTTTCCATATAAAACTGCATGAAGAACCGCCATATTTGACTTGTTGAGACCTACAGGGTCAACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTTGAAAAA]


>consensus_11066#3 GTTTCCATATAAAACTGCATGAAGAACCGCCATATTTGACTTGTTGAGACCTACAGGGTC AACTGTATGTGCATTTGGTGGACATGGCCTGCGAAGCAAATTTGATTACATTCTAAATTT GAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      TCTCTCCTCCCCCGTCCCTATCCCCTTCGCCCTTCGTCGTCGTCGTCGTCGTCGTTCGTC 60
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CCAATCTCCGCATCCCTCCATTCCCCCCTCCTCCTCGATGGCTCGCCTCCTCGCGCAAAC 120
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CCTAACCCTAACCCTAGCCCGCCCGGCTGCGGCGGCGGCGGCGCCCCTCCTCCCTCTCCG 180
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGGCCTCGCCACCAAGGTCGAGGTCATCGAGATCGACCTCGCCGAGGACGACGACTCCTC 240
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGCCTCCACCTCGGGCCCCGCCTCCTCCCCCGCGTCGGTGGAGGTGGTCGGGGTCAGGCG 300
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGCCCGACTGGCTCCCCTT 360
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCCACGGGGTCGCGGACCT 420
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGGTGGTGGCCGGAGGGCT 480
consensus_11066#1      ------------------------------------------------------------
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGGCGCTGTCCTTCTCCAC 540
consensus_11066#1      TGGTCGGGGTCAGGCGCCTGGAGGAGGCGATCCACGGCGTCATGGTGCGCCGCGCGGCGC 60
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAATTCCCACATACCAAGAA 600
consensus_11066#1      CCGACTGGCTCCCCTTCGTCCCCGGGGGCTCGTTCTGGGTTCCCCCCATGCGGCGGCCCC 120
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      GAAGTCAAGGAAACGTGCAACCCGCACTGATGAGGAAGAAAGCTGATTGGCTAATGCTCC 660
consensus_11066#1      ACGGGGTCGCGGACCTCGTCGGCCGGATCGCGGCGGCGGCGTCCGGGGCCGACGCGGAGG 180
                                                                                   

consensus_11066#2      ------------------------------------------------------------
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      ATTGCCAAGGGGAAGGCTTCTACAAGAAAAGGTTGTTCAGGGTTACACGTCTCTGCTATG 720
consensus_11066#1      TGGTGGCCGGAGGGCTCGCGTACGAGCCGGAGGTGTACGCGCCCATGACGGAGGAGGAGG 240
                                                                                   

consensus_11066#2      ---------------------GAAGATAATCTT--GTTTGCCACTGGCTTATGAATTGGG 37
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      ACCAATGTACATATGGATGACGGCAAGGACCCA--AGTGCTAATTAATCACCCCACCCCT 778
consensus_11066#1      CGCTCTCCTTCTCCACCGCGCGGGGCTGGCCGTCGGCCTCCTACTTCGTCGAAGGGAAAT 300
                                                                                   

consensus_11066#2      TTCCACATCCTGGTATAATTTCACCTCCACGAAACTTGTTAGTTGTTTATTTGTAATCGA 97
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      TGCACTATGAAGATAATCTGTTGCAACTGCTATGATTGG-GTTGCAATCTGTATATTTCA 837
consensus_11066#1      TCCCACATACCAGGATGAAGTCA-----AGGAAACGTGCAACCCGCACTGATGAGGAAGA 355
                                                                                   

consensus_11066#2      ACCACACCCCCTTGTTGCCCATTAACCCTTGGGTTTCACCGGTTAAATAAAAACCATGGG 157
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CTCAGAAGCTGTAGTGTTATTGTATCGACCAGCCCTTGTGCCATAGCCTTGGTTCACGGT 897
consensus_11066#1      AAGCTGATTGGCTAATGCTCCATTGCCAAGGGGAATGCTTCTACAAGAAAAAGTTGTCAT 415
                                                                                   

consensus_11066#2      AAGGGGAGAAACCTTGGAATGCTTTGTTT-TTGTGGTTTCTGCCAACAAGCCCATTAAGA 216
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      AATAAAACATGGAGGGAGAAGCTGGATGC-TTGTGTTTGTGTTCTGCAA---CAGCCATA 953
consensus_11066#1      GGTTACACGTGTCAGCTATGACCAAGCACATTATGGATACTGGCAGGACCCGAGTGCTAT 475
                                                                                   

consensus_11066#2      AAAATGGGAACACCTAGCTGGGAATCCCAACACAGGACCTGTTGGGATGGCTCTTTTGTG 276
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      GAAAATGGAACAC-TAGCTGGAATCCA----ACAAGGACTGT--GGATGGCTCTTT-GTG 1005
consensus_11066#1      TTAATATGAGACTCCGTATTCTATTAAGATTATATGGTCTAGT-GCATCATTTGGAAGCA 534
                                                                                   

consensus_11066#2      CCACAGGAAAAAAAAAGAATGTTTGCACAAGCGCTGAGATAAAAACATCTGCTTCCATCT 336
consensus_11066#3      ------------------------------------------------------------
consensus_11066#0      CCAAGAAAAAAAAAAAGAATGTTTGCA-AAGCGCTGAGATAAAAACATCTACTTCCATCT 1064
consensus_11066#1      TCTTGTTTGAAACACGAAACTGCTAGTTATATTTATATAGCTCAAAATCTTGTCTATTTT 594
                                                                                   

consensus_11066#2      CCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTG 396
consensus_11066#3      --------------GTTTCCATATAAAACTGCATGAAGAACCGCCATATTTGACTTGTTG 46
consensus_11066#0      CCAGTCTTGAATTTGTTTCCATATAAAACTGCATGTTGTAATGTCATATTTGACTTGTTG 1124
consensus_11066#1      AGATTCTTCATATGGTATATATAATATATTTAGTAATGTGAGAATGCATCATATATATTC 654
                                     ** *  ***  * * *   *   *         **   *  * ** 

consensus_11066#2      AGACCTAAAAGGTCAACTGTATGTGCATTTGGTGGACCTGGCCTGCGAA-GCCAATTTGA 455
consensus_11066#3      AGACCTACAGGGTCAACTGTATGTGCATTTGGTGGACATGGCCTGCGAA-GCAAATTTGA 105
consensus_11066#0      AGACCTAAAAGGTCAACTGTATGTGCATTTGGTGGACATGGCCTGCGAA-GCAAATTTGA 1183
consensus_11066#1      AATGTTAATTATTTAATATTGTGGATAATGCTGTAATGAGACATGAGAATGATTGTTATA 714
                       *    **     * **   * **   * *      *   * * ** *** *    **  *

consensus_11066#2      TTAC-ATTCTAAAAAAAAAA---------------------------------------- 474
consensus_11066#3      TTAC-ATTCTAAATTTGAAAAA-------------------------------------- 126
consensus_11066#0      TTAC-ATTCTAAATTTAAAAAAAAAAATGCCTCATCTATAAGAGAGAGCTGCTGTCAAGT 1242
consensus_11066#1      TGATGAGTCTAGATGTAGTAAAGGTAAGTACAGAAGTGTTATTATACTATGCTGATATGT 774
                       * *  * **** *      *                                        

consensus_11066#2      -------------------------
consensus_11066#3      -------------------------
consensus_11066#0      GAGCATATGAATGTAAAAAAAAAAA 1267
consensus_11066#1      GAAATCTATATTCTGANAC------ 793
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)