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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11084#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 3923 fasta sequence
[CCTCCCCCCTCGCCGCCGCCGCCGCCGCCGCCTCCTCGGCTCCTCCGCCATCCGCCCATCCCCCTCCATTCCTCCTCGCCCCCCGCGCCCGCAGGTTTTCCTCTCTCCCAAGGCGGCCACCCCAGATCCCGTCCTGTTCGATCCACGCCTCTCCCGCTCAAATCTCGGGGCGGGCCACCGTCTCCGCGGCCGCATGCCGGGATTGGCGCGAGAGCGCATCAGCAGTCGCCGCAGCCGAGCAACCTGATCTTCCCCCATGGCCGGATTCGGCGGGACGTGCAGGGTGGCAGCGGTGCTCGTCTTCACCGCCTGGATCGCGCTCACGGCGCTCACCCGGCTGCTCCGCCCCGTCCCCAACGGCTGCGTCATGACCTACATGTACCCGACCTACATCCCCGTCTCCACCCCCAAGAACGTCTCCTCCGACAGGTACGCCCTCTTCCTCTACCACGAGGGCTGGAAGCAGATCGACTTCCACCACCACCTCAGCAACCTCAACGGTGTCCCGGTTCTCTTCATCCCAGGCAATGGCGGCAGCTACAAGCAGGTCCGATCTCTGGCTGCTGAATCCTTTCGAGCATACCAAAATGGTCCACTTGAGCCTACCTTTTATCGGGAAGCATCTACTGCATTTTCAGTAAATGAACTGGAGGGTTTTTCAATCCCATCAAGATATGGCCGTATGTTGGATTGGTTTGCTGTTGACCTTGAAGGAGAACACTCTGCAATGGATGGACGCATACTTGAGGAGCATACTGAATATGTTGTTTACGCCATTCACAGGATCCTTGATCAATACAAAGAATCTCATTTAGCACGATCAAAGGGTCGTGCTCAATCCTCTGACAACTTGCCATCCAGTGTAATTTTAGTTGGACATTCCATGGGTGGTTTTGTGGCTCGAGCAGCTCTTGTCCATCCAGGCTTAAGGAAATCGGCTGTGGAAACCATACTGACACTCTCCAGTCCACATCAGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTTTTGCATGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGTGCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTTAGGTCAAAGTTAGCTTTGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAGCCATTTTTGAGTTCACAAAA-AAGACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTTCCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCT-GGGGTGAGGATTCA-TTTGTGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTGGAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCTGGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCTTCTGCTTAGTCCAGAAGAAATGAGTGGTTTCCGCTTCATGACTATCTCAGTGGCACCTCGACCGACAATTTCAGGTAGACCACCTCCAGCGGCATCTATGGCAGTAGGACAGTTCTTTAATCCAGAGGAAGGGACGAGTGCACTTTCTGCTGCCCGAATTATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTGAAGGAGGACCACCCACTGGCTTTAAACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCAGTTATATTATCTTTGAGAACTGCTGGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAAGCTGAGAAAAATAAACTTTGTAAACTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGACCCTGTATCAGGTCTGCACATTATTCCAAATATTTACTCTGAGACTCTAGTGGTTGATTCTTCACCTGCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCACATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTTTTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATGCGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAGTCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTTCTTTTTCTTGCCTTTCTTGTTTTCACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTGCTAGTTACCATGATGTGCTACATAGTTGCTAATGGCTTCACAATTTTATTGATACTAAGTTCAAAATTGATTCTTTATGTCGCTGCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAATCATGGGAGGATGGTACTCAATCAATGATTGTTCGCCACTTCCTCACTCTCTCATTACCATTTCAGTCGCTAAAGATTGTGCAGATAATTAAAAACAATCCAAGTATAATTGTAGCATTTGCTACAATACCACTTGTCTGCTTAGTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTCTCACATGCCTTCCATGCACACTCCACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGTATCACTCAGAAAAAGGATTTGTATAAATCCATGGGTGATAATATTATTCTGCCCGAAAATAAACAAGATGGCCTCGAGCAACTTCTGCCGATGGATGATAGCCCAACATCTGTTAAAAGTTTTACTGACTGCCAATTGGAAGTATTTGACTGTCGGCATGGGATCATGATCTTGCACCTTCTTGCCACTCTAATGTTTGCACCTTCTCTTGTTGCTTGGCTACAGAGAATCGGAATGGGTCAAAATTTTCCATGGTTTGTGGATTCAGTACTTTGTGTTGGCACTATTCTGCATGGACTTTTCGGATCACCACCAAATGTGAGCTGTATATCTTTCAAGCTACCTGGAAGGAGAGGGCGAGATGTTGGACTAAGCTTTCTCTACCTTGTAGCTGGATATTATTCATTTGTTAGCTCAATGGCTCTGGCTCCTTATAGGGCGCTCTATGCATTGGCAATCATCGGTTTCATCTGCTTTGCTTCCAGAATTATTGAAACAAGAAGTACGGTAAGAGGTGATGTTATTTCTAGAAAACATCGGAAGCATTCATAGGGACTAACAAATGAGAAGTGTATTTTAGATATGAAGTTGGATACATTAGTTTATAATAGCAGATCGTGTTTTGGGGTTTATGGTTGGAAACTGCAAAGCATTGCTCTTGACACTAAGGCCAGTTTTGCGAGGGAAATGAGGGTATATTTTTCTTTTCACTGTTGTGAAGGAGATTTGATGAGTCACTCAGATGATCTGGATATGTTGTATCATAGGTGGGGTTGATTTGGGGGAATTTTAAGCCCATTGTTATGAAAAGACGGAACCAGTAACTGTACA-TTGTTGAATGCCGACATGATATAGTGGTTTTTTCATGAATGACCATGGGTTCCTTACTTCCTTAGGGGGGAAAAGTGTGAAATATATATGGCATTTTCAA]
[+] EMBL AK065862 [CCTCCCCCCTCGCCGCCGCCGCCGCCGCCGCCTCCTCGGCTCCTCCGCCATCCGCCCATCCCCCTCCATTCCTCCTCGCCCCCCGCGCCCGCAGGTTTTCCTCTCTCCCAAGGCGGCCACCCCAGATCCCGTCCTGTTCGATCCACGCCTCTCCCGCTCAAATCTCGGGGCGGGCCACCGTCTCCGCGGCCGCATGCCGGGATTGGCGCGAGAGCGCATCAGCAGTCGCCGCAGCCGAGCAACCTGATCTTCCCCCATGGCCGGATTCGGCGGGACGTGCAGGGTGGCAGCGGTGCTCGTCTTCACCGCCTGGATCGCGCTCACGGCGCTCACCCGGCTGCTCCGCCCCGTCCCCAACGGCTGCGTCATGACCTACATGTACCCGACCTACATCCCCGTCTCCACCCCCAAGAACGTCTCCTCCGACAGGTACGCCCTCTTCCTCTACCACGAGGGCTGGAAGCAGATCGACTTCCACCACCACCTCAGCAACCTCAACGGTGTCCCGGTTCTCTTCATCCCAGGCAATGGCGGCAGCTACAAGCAGGTCCGATCTCTGGCTGCTGAATCCTTTCGAGCATACCAAAATGGTCCACTTGAGCCTACCTTTTATCGGGAAGCATCTACTGCATTTTCAGTAAATGAACTGGAGGGTTTTTCAATCCCATCAAGATATGGCCGTATGTTGGATTGGTTTGCTGTTGACCTTGAAGGAGAACACTCTGCAATGGATGGACGCATACTTGAGGAGCATACTGAATATGTTGTTTACGCCATTCACAGGATCCTTGATCAATACAAAGAATCTCATTTAGCACGATCAAAGGGTCGTGCTCAATCCTCTGACAACTTGCCATCCAGTGTAATTTTAGTTGGACATTCCATGGGTGGTTTTGTGGCTCGAGCAGCTCTTGTCCATCCAGGCTTAAGGAAATCGGCTGTGGAAACCATACTGACACTCTCCAGTCCACATCAGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTTTTGCATGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGTGCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTTAGGTCAAAGTTAGCTTTGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAGCCATTTTTGAGTTCACAAAA AAGACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTTCCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCT GGGGTGAGGATTCA TTTGTGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTGGAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCTGGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCTTCTGCTTAGTCCAGAAGAAATGAGTGGTTTCCGCTTCATGACTATCTCAGTGGCACCTCGACCGACAATTTCAGGTAGACCACCTCCAGCGGCATCTATGGCAGTAGGACAGTTCTTTAATCCAGAGGAAGGGACGAGTGCACTTTCTGCTGCCCGAATTATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTGAAGGAGGACCACCCACTGGCTTTAAACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCAGTTATATTATCTTTGAGAACTGCTGGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAAGCTGAGAAAAATAAACTTTGTAAACTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGACCCTGTATCAGGTCTGCACATTATTCCAAATATTTACTCTGAGACTCTAGTGGTTGATTCTTCACCTGCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCACATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTTTTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATGCGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAGTCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTTCTTTTTCTTGCCTTTCTTGTTTTCACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTGCTAGTTACCATGATGTGCTACATAGTTGCTAATGGCTTCACAATTTTATTGATACTAAGTTCAAAATTGATTCTTTATGTCGCTGCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAATCATGGGAGGATGGTACTCAATCAATGATTGTTCGCCACTTCCTCACTCTCTCATTACCATTTCAGTCGCTAAAGATTGTGCAGATAATTAAAAACAATCCAAGTATAATTGTAGCATTTGCTACAATACCACTTGTCTGCTTAGTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTCTCACATGCCTTCCATGCACACTCCACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGTATCACTCAGAAAAAGGATTTGTATAAATCCATGGGTGATAATATTATTCTGCCCGAAAATAAACAAGATGGCCTCGAGCAACTTCTGCCGATGGATGATAGCCCAACATCTGTTAAAAGTTTTACTGACTGCCAATTGGAAGTATTTGACTGTCGGCATGGGATCATGATCTTGCACCTTCTTGCCACTCTAATGTTTGCACCTTCTCTTGTTGCTTGGCTACAGAGAATCGGAATGGGTCAAAATTTTCCATGGTTTGTGGATTCAGTACTTTGTGTTGGCACTATTCTGCATGGACTTTTCGGATCACCACCAAATGTGAGCTGTATATCTTTCAAGCTACCTGGAAGGAGAGGGCGAGATGTTGGACTAAGCTTTCTCTACCTTGTAGCTGGATATTATTCATTTGTTAGCTCAATGGCTCTGGCTCCTTATAGGGCGCTCTATGCATTGGCAATCATCGGTTTCATCTGCTTTGCTTCCAGAATTATTGAAACAAGAAGTACGGTAAGAGGTGATGTTATTTCTAGAAAACATCGGAAGCATTCATAGGGACTAACAAATGAGAAGTGTATTTTAGATATGAAGTTGGATACATTAGTTTATAATAGCAGATCGTGTTTTGGGGTTTATGGTTGGAAACTGCAAAGCATTGCTCTTGACACTAAGGCCAGTTTTGCGAGGGAAATGAGGGTATATTTTTCTTTTCACTGTTGTGAAGGAGATTTGATGAGTCACTCAGATGATCTGGATATGTTGTATCATAGGTGGGGTTGATTTGGGGGAATTTTAAGCCCATTGTTATGAAAAGACGGAACCAGTAACTGTACA TTGTTGAATGCCGACATGATATAGTGGTTTT ]
[+] EMBL CB636091 [ AATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAGCCATTTTTGAGTTCACAAAA AAGACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTTCCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGGTGAGGATTCATTTTGTGGCCAGAAAAGGA ]
[+] EMBL CB636528 [ AATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAGCCATTTTTGAGTTCACAAAATATTACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTTCCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTACATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCACCTACTGTTCTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAG ]
[+] EMBL CF304353 [ tcgtgccgCAGTTCTTTAATCCAGAGGAAGGGACGAGTGCACTTTCTGCTGCCCGAATTATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTGAAGGAGGACCACCCACTGGCTTTAAACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCAGTTATATTATCTTTGAGAACTGCTGGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAAGCTGAGAAAAATAAACTTTGTAAACTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGACCCTGTATCAGGTCTGCACATTATTCCAAATATTTACTCTGAGACTCTAGTGGTTGATTCTTCACCTGCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCACATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTTTTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATGCGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAGTCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTT ]
[-] EMBL CB631450 [ TACTCTGAGACTCTAGTGGTTGATTCTTCACCTGCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCACATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTTTTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATGCGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAGTCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTTCTTTTTCTTGCCTTTCTTGTTTTCACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTGCTAGTTACCATGATGTGCTACATAGTTGCTAATGGCTTCACAATTTTATTGATACTAAGTTCAAAATTGATTCTTTATGTCGCTGCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAATCATGGGAGGATGGTACTCAATCAATGATTGTTCGCCACTTCCTCACTCTCTCATTACCATTTCAGTCGCTAAAGATTGTGCAGATAATTAAAAACAATCCAAGTATAATTGTAGCATTTGCTACAATACCACTTGTCTGCTTAGTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTCTCACATGCCTTCCATGCACACTCCACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGTATCACTCAGAAAAAGGA GTGTATAAATCCATGGGTGATAATATTATTCTGCCCGAAAATGAA ]
[+] EMBL D42202 [ GTGGATTCAGTACTTTGTATTGGCACTATTCTACATGGACTTTTCGGATCACCACCAAATGTGAGCTGTATATCTTTCAAGCTACCTGGAA GAGAGGGCGAGATGTTGGACTAAGCTTTCTCTACCTTGTAGCTGGATATTATTCATTTGTTAGCTCAATGGCTCTGGCTCCTTATAGGGCTCTCTATGCATTGGCA ]
[-] EMBL BU667019 [ AGCATTCATAGGGACTAACCAATGAGAAGTGTATTTTAGATATGAAGTTGGATACATTAGTTTATAATAGCAGATCGTGTTTTGGGGTTTATGGTTGGAAACTGCCAAGCATTGCTCTTGACACTAAGGCCNGTTTTGCGAGGGAAATGAGGGTATATTTTTCTTTTCACTGTTGTGAAGGAGATTTGATGAGTCACTCAGATGATCTGGATATGTTGTATCATAGGTGGGGTTGATTTGGGGGAATTTTAAGCCCCTTGTTATGAAAAGACGGAACCCGTAACTGTACACTTGTTGAATGCCGACATGATGTAGTGGTTTTTTCATGAATGACCATGGGTTCCTTACTTCCTTAGGGGGGAAAAGTGTGAAATATATATGGCATTTTCAA]
consensusID : consensus_11084#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence
[TGCAATTGCCTTAGATGTTTCGCATGTTGTTCACCTTGTAGAATGATTGCCTGTCCAGGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTTTTGCGTGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGTGCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTTAGGTCAAAGTTAGCTTCGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATTCATTTGTGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTGGAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCTGGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCT]
[+] EMBL CB631449 [TGCAATTGCCTTAGATGTTTCGCATGTTGTTCACCTTGTAGAATGATTGCCTGTCCAGGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTTTTGCGTGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGTGCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTTAGGTCAAAGTTAGCTTCGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGGAGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAATCAGTTAGTTGTACAGGTGTTAAGCCTCCAAATCTGATTGCAAGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCTCTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACTGTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGCAAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATTCATTTGTGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTGGAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCTGGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11084#0 CCTCCCCCCTCGCCGCCGCCGCCGCCGCCGCCTCCTCGGCTCCTCCGCCATCCGCCCATC 60
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CCCCTCCATTCCTCCTCGCCCCCCGCGCCCGCAGGTTTTCCTCTCTCCCAAGGCGGCCAC 120
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CCCAGATCCCGTCCTGTTCGATCCACGCCTCTCCCGCTCAAATCTCGGGGCGGGCCACCG 180
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCTCCGCGGCCGCATGCCGGGATTGGCGCGAGAGCGCATCAGCAGTCGCCGCAGCCGAGC 240
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 AACCTGATCTTCCCCCATGGCCGGATTCGGCGGGACGTGCAGGGTGGCAGCGGTGCTCGT 300
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTTCACCGCCTGGATCGCGCTCACGGCGCTCACCCGGCTGCTCCGCCCCGTCCCCAACGG 360
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTGCGTCATGACCTACATGTACCCGACCTACATCCCCGTCTCCACCCCCAAGAACGTCTC 420
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTCCGACAGGTACGCCCTCTTCCTCTACCACGAGGGCTGGAAGCAGATCGACTTCCACCA 480
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CCACCTCAGCAACCTCAACGGTGTCCCGGTTCTCTTCATCCCAGGCAATGGCGGCAGCTA 540
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CAAGCAGGTCCGATCTCTGGCTGCTGAATCCTTTCGAGCATACCAAAATGGTCCACTTGA 600
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GCCTACCTTTTATCGGGAAGCATCTACTGCATTTTCAGTAAATGAACTGGAGGGTTTTTC 660
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 AATCCCATCAAGATATGGCCGTATGTTGGATTGGTTTGCTGTTGACCTTGAAGGAGAACA 720
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTCTGCAATGGATGGACGCATACTTGAGGAGCATACTGAATATGTTGTTTACGCCATTCA 780
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CAGGATCCTTGATCAATACAAAGAATCTCATTTAGCACGATCAAAGGGTCGTGCTCAATC 840
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTCTGACAACTTGCCATCCAGTGTAATTTTAGTTGGACATTCCATGGGTGGTTTTGTGGC 900
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCGAGCAGCTCTTGTCCATCCAGGCTTAAGGAAATCGGCTGTGGAA-ACCATACTGA-CA 958
consensus_11084#1 --------------TGCAATT-GCCTTAGATGTTTCGCATGTTGTTCACCTTGTAGAATG 45
* ** * **** *** *** * *** * **
consensus_11084#0 CTCTCCAGTCCACATCAGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTT 1018
consensus_11084#1 ATTGCCTGTCCA----GGTACCCTCCCATTGCTCTGCAGCCATCTCTGGGTCAGTTTTTT 101
* ** ***** *******************************************
consensus_11084#0 TTGCATGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGT 1078
consensus_11084#1 TTGCGTGTCAATGAAGAATGGAGAAATGGATACAAGACAGGGTTATCACGCACCAGCAGT 161
**** *******************************************************
consensus_11084#0 GCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTT 1138
consensus_11084#1 GCAAAACTCTCAAATGTTGTTGTTGTCTCTGTAGCTGGAGGCATCCATGATTATCAGGTT 221
************************************************************
consensus_11084#0 AGGTCAAAGTTAGCTTTGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGG 1198
consensus_11084#1 AGGTCAAAGTTAGCTTCGCTGGATGGAATTGTACCTTCTACTCATGGTTTTATGGTAGGG 281
**************** *******************************************
consensus_11084#0 AGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAAT 1258
consensus_11084#1 AGCTCAAGCATGAAGAATGTTTGGTTATCCATGGAACATCAGTCTATCCTCTGGTGCAAT 341
************************************************************
consensus_11084#0 CAGTTAGTTGTACAGGTTGCACACACACTTCTTAGTATGGTAGATCCTTTGAATGGACAG 1318
consensus_11084#1 CAGTTAGTTGTACAGGT------------------------------------------- 358
*****************
consensus_11084#0 CCATTTTTGAGTTCACAAAAAAGACTTTTTGTATTTGCAAAAATGCTCCAAAGTGCAGTT 1378
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CCGCAGTCTTTGAGTTGGGTGGCTCCTGTTTCAGGTGTTAAGCCTCCAAATCTGATTGCA 1438
consensus_11084#1 ------------------------------------GTTAAGCCTCCAAATCTGATTGCA 382
************************
consensus_11084#0 AGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCT 1498
consensus_11084#1 AGTGGTAACAAGGAAGCTAGTGACTTGCAGCAAAAGGATTCACTTTCTTGCCCTCCATCT 442
************************************************************
consensus_11084#0 CTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACT 1558
consensus_11084#1 CTTCAATGGACAAGTGATGGCCTTGAAAAGGACCTGCATATTCAGTTAAATTCAGTTACT 502
************************************************************
consensus_11084#0 GTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGC 1618
consensus_11084#1 GTTTTAGCAATGGATGGCAAGAGAAGATGGTTAGATATTAAAAAACTGGGATCAAATGGC 562
************************************************************
consensus_11084#0 AAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATTCATTTG 1678
consensus_11084#1 AAAGGGCACTTTGTTTTTGTAAGTAATCTTTCTCCATGTTCTGGGGTGAGGATTCATTTG 622
************************************************************
consensus_11084#0 TGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTG 1738
consensus_11084#1 TGGCCAGAAAAGGATCATTCATCTGAACAAAATGGAGTACCTGCCAGCAAAAAGATAGTG 682
************************************************************
consensus_11084#0 GAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCT 1798
consensus_11084#1 GAAGTTACATCAAAGATGGTCCAAATACCTGCAGGACCTGCACCAAAACAGGTTGAACCT 742
************************************************************
consensus_11084#0 GGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCTTCTGCTTAGTCCAGAAGAAATG 1858
consensus_11084#1 GGGAGTCAAACCGAGCAACCACCTCCTACTGCATTTCT---------------------- 780
**************************************
consensus_11084#0 AGTGGTTTCCGCTTCATGACTATCTCAGTGGCACCTCGACCGACAATTTCAGGTAGACCA 1918
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CCTCCAGCGGCATCTATGGCAGTAGGACAGTTCTTTAATCCAGAGGAAGGGACGAGTGCA 1978
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTTTCTGCTGCCCGAATTATTGGCTCCAGCTATATTCCTGAAGAAATATTTTTGAAGGAG 2038
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GACCACCCACTGGCTTTAAACTTGTCGTTTTCTGTGAGCCTTGGTCTTCTACCAGTTATA 2098
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TTATCTTTGAGAACTGCTGGATGTGGAGTAAAAGCTACTGGCGACCAATTGGAAGCTGAG 2158
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 AAAAATAAACTTTGTAAACTGCGGTGCTTCCCACCTGTTGCTTTGGCTTGGGACCCTGTA 2218
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCAGGTCTGCACATTATTCCAAATATTTACTCTGAGACTCTAGTGGTTGATTCTTCACCT 2278
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GCCCTTTGGGATTCACATCAAGGGACTGAAAGATCTACTGTGCTTGTCCTGGCTGATCCA 2338
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CATTGCTCATATGAAGTGAGTCTTCGTGTTTCACTTAGTGCTGCAGCAAGCAGATTCTTT 2398
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TTGCTGTACTCATCACAGATTCTTGGTTTCATGATTGCTGTAATGTTTTTCGGCCTGATG 2458
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CGGCAATCATCAGCATGGGAACATGATTCTTCTGTGCCGTCTGTTTTGTCAGCTATAGAG 2518
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCTAATCTGAGGCTGCCTAGAGCATTCATGTTCCTTTGCTTCATACCAGTTCTTCTTTTT 2578
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CTTGCCTTTCTTGTTTTCACCAGAGAGCAAAATCCTCCACTTGGAACCTTCCTGCTAGTT 2638
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ACCATGATGTGCTACATAGTTGCTAATGGCTTCACAATTTTATTGATACTAAGTTCAAAA 2698
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TTGATTCTTTATGTCGCTGCTATTCTTCATGTCTTCATCAAGAGGCGCTGGCAATCATGG 2758
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GAGGATGGTACTCAATCAATGATTGTTCGCCACTTCCTCACTCTCTCATTACCATTTCAG 2818
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCGCTAAAGATTGTGCAGATAATTAAAAACAATCCAAGTATAATTGTAGCATTTGCTACA 2878
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ATACCACTTGTCTGCTTAGTTCATCCAGCAATTGGTCTTGGTGTATTACTTCTCTCACAT 2938
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GCCTTCCATGCACACTCCACCCTTTGCAGTTTCTTAGCAGCTTCATTTCGCAGTATCACT 2998
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 CAGAAAAAGGATTTGTATAAATCCATGGGTGATAATATTATTCTGCCCGAAAATAAACAA 3058
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GATGGCCTCGAGCAACTTCTGCCGATGGATGATAGCCCAACATCTGTTAAAAGTTTTACT 3118
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GACTGCCAATTGGAAGTATTTGACTGTCGGCATGGGATCATGATCTTGCACCTTCTTGCC 3178
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ACTCTAATGTTTGCACCTTCTCTTGTTGCTTGGCTACAGAGAATCGGAATGGGTCAAAAT 3238
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TTTCCATGGTTTGTGGATTCAGTACTTTGTGTTGGCACTATTCTGCATGGACTTTTCGGA 3298
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCACCACCAAATGTGAGCTGTATATCTTTCAAGCTACCTGGAAGGAGAGGGCGAGATGTT 3358
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GGACTAAGCTTTCTCTACCTTGTAGCTGGATATTATTCATTTGTTAGCTCAATGGCTCTG 3418
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 GCTCCTTATAGGGCGCTCTATGCATTGGCAATCATCGGTTTCATCTGCTTTGCTTCCAGA 3478
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ATTATTGAAACAAGAAGTACGGTAAGAGGTGATGTTATTTCTAGAAAACATCGGAAGCAT 3538
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TCATAGGGACTAACAAATGAGAAGTGTATTTTAGATATGAAGTTGGATACATTAGTTTAT 3598
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 AATAGCAGATCGTGTTTTGGGGTTTATGGTTGGAAACTGCAAAGCATTGCTCTTGACACT 3658
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 AAGGCCAGTTTTGCGAGGGAAATGAGGGTATATTTTTCTTTTCACTGTTGTGAAGGAGAT 3718
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TTGATGAGTCACTCAGATGATCTGGATATGTTGTATCATAGGTGGGGTTGATTTGGGGGA 3778
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ATTTTAAGCCCATTGTTATGAAAAGACGGAACCAGTAACTGTACATTGTTGAATGCCGAC 3838
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 ATGATATAGTGGTTTTTTCATGAATGACCATGGGTTCCTTACTTCCTTAGGGGGGAAAAG 3898
consensus_11084#1 ------------------------------------------------------------
consensus_11084#0 TGTGAAATATATATGGCATTTTCAA 3923
consensus_11084#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||