cluster # 11090

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Oryza sativa
cluster # 11090 cluster # 11090 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11090#0 length = 1052 sequences # 8
consensusID : consensus_11090#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1052
fasta sequence
                              [TGGACTGAAGAGTGACACTGACATGGACTGAAGAGTAGAAATTTGTGCCTCTTCTTATT-TCTTC-ACCG-TTCTTCGCCGACAAGAAGAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACAT-CAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGA-GT--GGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATA-GGCTTGGCT-GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGG-TCTCAGGCTAATGATAAGGGCCCTTCTGATAAAAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCACAAGTTTTTTACTCGATAT-CATG-ACTTCTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGCTAAGTCCACCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGTTTCCCTTTGAATCAAAAAAAAAAAAAAAAA]

[+] EMBL CF309105             [TGGACTGAAGAGTGACACTGACATGGACTGAAGAGTAGAAATTTGTGCCTCTTCTTATT TCTTC ACCG TT TTC CCG C AGAA AA AA GCTCCCCGCGGCTG GGCGGCGGCGGCGACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACATNCAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGA AAAGGA GTGGGGTGGTCGCTCTTTGCGGCGGCTGCAATAATTTCCACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK067374             [                                             tctCTCTTATTCTTCTCTTCGACCGTTTCTTCGCCGACAAGAAGAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACAT CAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGA GT  GGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATA GGCTTGGCT GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGG TCTCAGGCTAATGATAAGGGCCCTTCTGATAAAAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCACAAGTTTTTTACTCGATAT CATG ACTTCTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGCTAAGTCCACCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGTTTC                           ]
[+] EMBL AK099160             [                                                                         CTTCGCCGACAAGAAGAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACAT CAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGA GT  GGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATA GGCTTGGCT GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGG TCTCAGGCTAATGATAAGGGCCCTTCTGATAAAAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCACAAGTTTTTTACTCGATAT CATG ACTTCTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGCTAAGTCCACCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGAGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATG                               ]
[+] EMBL CF333754             [                                                                                        GAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACAT CAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGANGT  GGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATAGGGCTTGGCT GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAAC AGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAAC                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF291198             [                                                                                           GAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCGACCAGCCCTTCCCCTCCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCCTCTGGTGCGCCGCGGCCTCGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCGAGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGAAGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACACCGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACAT CAAACTTGAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAGGTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGA GTG GGTGGTCGCTCGTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATA GGCTTGGCTGGGTTTGGGGAGCCAGGAAGCATCGAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CF309106             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGGAATCATATGAGAAAGGA GT  GGTGGTCGCTCTTTGCGGCGGCTGCAATAATTTCCACCTGATCGCGGATA GGCTTGGCT GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGG TCTCAGGCTAATGATAAGGGCCCTTTTGATAAAAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCACAAGTTTTTTACTCGATAT CATG ACTTCTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCACCCTTGTGGCTAAGTCCCCCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGTTTCCCTTTGAATCAAAAAAAAAAAAAAAAA]
[-] EMBL CF333755             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCT GGTTTGGGGAGCCAGGAAGCATCGAAGACTTTTTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTTTTAACTTCACTTTTGAGGACTTGGTTGGG TTTCAGGCTAATGATAAGGGCCCTTTTGATAAAAAATAGATTTTTTTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCCCAAGTTTTTTACTCGATAT CATG ACTTTTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTTTGATGTTATTGCAGTGTAATTGTCAATTTTCAACCTTGTGGCTAAGTCCCCCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGTTTCCCTTTGAA  AAAAAAAAAAAAAA   ]
[-] EMBL CF291199             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCTTAACTTCACTCTTGAGGACTTGGTTGGGTTCTCAGGCTAATGATAAGGACCCTTCTGATAAAAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCTAAGGAAATCCACAAGTTTTTTACTCGATATNCATGNACTTCTCAAGGTGGAGTAGTCCAACTTTTTGCACTTGTTAGTTCTGATGTAATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGCTAAGTCCACCGTGTGACTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTAGGCTGTGTGTCGTAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAATGTTTCCCTTTGAATCAAAAAA           ]




>consensus_11090#0
TGGACTGAAGAGTGACACTGACATGGACTGAAGAGTAGAAATTTGTGCCTCTTCTTATTT
CTTCACCGTTCTTCGCCGACAAGAAGAAGAAGGCTCCCCGCGGCTGCGGCGGCGGCGGCG
ACCAGCCCTTCCCCTTCTCCTGCTTCGACAGTTCGCCGCCATGGCCACTCGGTTTCTGCC
TCTGGTGCGCCGCGGCCTTGCCGGCGTCCTGAATCAATCGCCCGCGCCCGCGTCCACCCG
AGGATTCTTGTTTCCTGCACCTGTGACTGCTGGCATAAGATCTCTGCAAACTATCATGGA
AGCAAGCAATAATGCTTCAGATGACCGTAACCAGGACATAGAGGATTCCAAAACCGACAC
CGTGCCAGCTACGGTCCCTTCATCGGATTCCGGCTTCAAAGTTAGAGATACATCAAACTT
GAAGATCTCACCGAGACACGACCTCGCCATGATCTTTACGTGCAAGGTTTGCGAGACCAG
GTCTATGAAGATGGCGAGCAAGGAATCATATGAGAAAGGAGTGGTGGTCGCTCGTTGCGG
CGGCTGCAATAATTTCCACCTGATCGCGGATAGGCTTGGCTGGTTTGGGGAGCCAGGAAG
CATCGAAGACTTTCTAGCCGAACAAGGAGAGGAGGTGAAGAAAGGCTCAACAGATACTCT
TAACTTCACTCTTGAGGACTTGGTTGGGTCTCAGGCTAATGATAAGGGCCCTTCTGATAA
AAAATAGATTTCTCTTCAGTATGGCTTTGGGTCAAGACAACTTAAAAAAGGTTAACTCCT
AAGGAAATCCACAAGTTTTTTACTCGATATCATGACTTCTCAAGGTGGAGTAGTCCAACT
TTTTGCACTTGTTAGTTCTGATGTTATTGCAGTGTAATTGTCAATTCTCAACCTTGTGGC
TAAGTCCACCGTGTGGCTTTGGTAAATTTATTGTAGTGGACACGACCCGATTATGTACTA
GGCTGTGTGTCATAGTTTTGTGATGTTCTTGACAAAAGTAACAAAACTAATTATGGAAAT
GTTTCCCTTTGAATCAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case