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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11092#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2121 fasta sequence
[TCAAGAGTCTTCCCGGCGGCAAGACTCGTACGAATTCAATTCCCCTGCCAAGCCAAGACCGGCACCCACGGCCCCTAGGCTAGAAAAAGAGGAAAGGGCGCGCGCACGCGCGCTTGCGCTTAGCTGAAAAGAAGGCTGAAGCGATATG-GATCATCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC-CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGAGTACGTCCGGAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAGAAAAACAGAGACTATTCTATATCTTTCTTTAAATGTTATACATCTTCTGATGAAT]
[+] EMBL AK099862 [TCAAGAGTCTTCCCGGCGGCAAGACTCGTACGAATTCAATTCCCCTGCCAAGCCAAGACCGGCACCCACGGCCCCTAGGCTAGAAAAAGAGGAAAGGGCGCGCGCACGCGCGCTTGCGCTTAGCTGAAAAGAAGGCTGAAGCGATATG GATCATCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGAGTACGTCCGGAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATC ]
[+] EMBL CB685172 [ TATGCGTTC TCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGC ]
[+] EMBL CB680864 [ CGGCCGCCTTCAGAGAAGGCCGAGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGAGGGGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCCGAGAACAGGTGAAAGTGAAGGAAAGAATAACATCAAGGAGCGAACTGCTCTCATGGTCAACTTAATGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCCTG ]
[+] EMBL CB655309 [ CTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGAGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGA ]
[-] EMBL CB680865 [ GAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAGAAAAACAGAGACTATTCTATATCTTTCTTTAAATGTTATACATCTTCTGATGAAT]
[-] EMBL CB655157 [ GTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGAAGGGCATATAATACAGCAGAACA ]
[-] EMBL CB655310 [ CAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAAAAAAAagga ]
[-] EMBL CB685583 [ TGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGATATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGGTACTGGATGACTTCACCGAGTCCATGAGGGTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCGCAGGATTGTCCCTAAGTGTACCAAGGTAGAATATAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||