These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11092#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2121 fasta sequence [TCAAGAGTCTTCCCGGCGGCAAGACTCGTACGAATTCAATTCCCCTGCCAAGCCAAGACCGGCACCCACGGCCCCTAGGCTAGAAAAAGAGGAAAGGGCGCGCGCACGCGCGCTTGCGCTTAGCTGAAAAGAAGGCTGAAGCGATATG-GATCATCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC-CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGAGTACGTCCGGAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAGAAAAACAGAGACTATTCTATATCTTTCTTTAAATGTTATACATCTTCTGATGAAT] [+] EMBL AK099862 [TCAAGAGTCTTCCCGGCGGCAAGACTCGTACGAATTCAATTCCCCTGCCAAGCCAAGACCGGCACCCACGGCCCCTAGGCTAGAAAAAGAGGAAAGGGCGCGCGCACGCGCGCTTGCGCTTAGCTGAAAAGAAGGCTGAAGCGATATG GATCATCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGAGTACGTCCGGAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATC ] [+] EMBL CB685172 [ TATGCGTTC TCTCGGCGGCATCAGGCTGCGGAGGCCGGTGCTGTCGATTGACAACGCGGAGCCCGCGGGGGAGACGGGGATGAGCGAGACGAAGAAGAAGGCGGCGGCGGTGGCGGAGGAGGAGGAGGAGTTGCTGGAGGAGCCGGTGAGCCCGGCGGGGCGGCTGTTCCGGGAGCCGCACTTCAGCTGCTACATCGTGTGCACGTTGGGCGTCGCCGAGCCGGTCGACCTGCCCGCCGTCCGCGCCGGCATCGAGGCCACCCTCGCGCGCCACCCGCGCTTCTGCAGCATCCAGGTGTTGGACGAGCTGGATAAGAGCGCGAAGCCTATGTGGGTCCGGACCAAGGTGAACCTGGACGACCACATCATCGTCCCGGACCTGGGCCCCACCGACACGTCGGCCGAC CCGGAGAAGGCCGTGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGC ] [+] EMBL CB680864 [ CGGCCGCCTTCAGAGAAGGCCGAGGAGGACTACGTGTCGTCGCTCTCCACGCCGTCCATGCCCATGGACCGCTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGAGGGGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCCGAGAACAGGTGAAAGTGAAGGAAAGAATAACATCAAGGAGCGAACTGCTCTCATGGTCAACTTAATGCCGACTCCTGGGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCCTG ] [+] EMBL CB655309 [ CTCCCGCCCGCTCTGGGAGCTCCACGTCCTCGGCTTCCCCACCGCCGAGGCCGCCGCCACCGTCGCGCTCCGCATGCACCACTCCCTCGGCGACGGCGTCTCGTTGCTCTCCCTCCTCATCGCCTGCACCCGCCGCGCCGACGACCCGGACGCGATCCCGGCGCTCCCGTCCTCCGCCGCCGGCCGCCGCCGCCGCGAGGGCCCGCTGCACGCGCTGCCGCCCCGCCCGCCGCTCGCCGCGGGCGCGCTCGCGCTCGCCGCGTGGGCGCTGTCCTACCTCGTGCTCGCGTGGCACACGGTGGTGGACGTGGTCTGCTTCACCCTCACGGCGGCGTCGCTCATGGGCGACGCCCGCACGGTGCTCAAGGGCGACGAGGGCGCCGAGTTCCGGCCCAGGCGCTTCGTGAATCGCACGATCAGCCTCGACGACGTCAAGAACATCAAGAACGCCGTGGGATGCACTGTAAATGATGTGCTGGTTGGACTGAGTTCTGCAGCATTGTCCCGGTATTATTTCCGGAGAACAGGTGAAAGTGAAGGAAAGAAGAACATCAAGGTGCGAACTGCTCTCATGGTCAACTTAAGGCCGACTCCTGAGCTACATGAACTGGCAAAAATGATGGAGTCTGGCAAGAACAACGGCGTGAAATGGGGGAATCGGTTTGGCTACATGATACTGCCATTCCACCTAGCCAAGCACGATGACCCTCTGGA ] [-] EMBL CB680865 [ GAAAGCGACCAAGGTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAGAAAAACAGAGACTATTCTATATCTTTCTTTAAATGTTATACATCTTCTGATGAAT] [-] EMBL CB655157 [ GTTACCCGCAGGAAGAAGAGCTCCATGGAGGCGATCTTCACCTACTGGAGCGCCGACATGGTAGTCAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGAAGGGCATATAATACAGCAGAACA ] [-] EMBL CB655310 [ CAAACTTTTTGGCATCAAGGCGGCAGCTTCTCTCTGCTACGGAATGTTCTCGAACACCACACTGTCTTTCTCCAACCTGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGCTATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGCTACTGGATGACTTCACCGAGTCCATGAGGCTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCACAGGATGGTCCTTAAGTGTACAAATGTCGAATATATGCAAAAGAAAATTGCTGAAGATGATTGATGTATTGTAATTCTGAGTTCAATTCTTTGTAAAGGATAGAAGGATCTATACCAAATCAAAGTATGGAAGGAAGAAGAAGAATTAGATCTTAAGGGGAAAAGGAAGAAGAGTATACAGAAACAGGTATTCTCATACTATTAGTTATACAGAAATTACACATCCACTGTCTGCAAAATTCCTCCCTTTGACTCCTGCCATATAGGGGCGATATGAGAGCTGCTCATATTCAAGTATTCAGAACAGTTGTCCATATAATACAGCAGAACAGTTAGACAAAAAAAagga ] [-] EMBL CB685583 [ TGGCAGGGCCAAGCGAGCAGATCTTGTTCTGCGGCAACCCGATCGTGTACATCTCCCCAACCAGATATGGCCACCCGCATGCCTTGACAATGCATTGGCAGAGCTACATGAACACTATAAAGCTAGCCCTTGCTGTAGATGAGACACAGTTTCCAGATGCTCATGAGGTACTGGATGACTTCACCGAGTCCATGAGGGTCATCCGGGAGGCAGCTTCAAGAGGGACAGACAAAGCGCAGGATTGTCCCTAAGTGTACCAAGGTAGAATATAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||