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Oryza sativa
cluster # 11093 cluster # 11093       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11093#0 length = 1459 sequences # 2  
consensus_11093#1 length = 1244 sequences # 5  
consensus_11093#2 length = 327 sequences # 1  

consensusID : consensus_11093#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1459
fasta sequence
                              [TTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCGTACGTTTACTAATCTCCTGCCAAAATCTGCATCCCCTACTGCAATTACAGTTCCATCTCGCAGCTGAGACGATGAATTTGCATTCATTCTTATTACTAATCCAACTTATCGTACCAATTAGCAATCCAATTAAGTTTATTTGCTGTACTAAAAAAAGATATGATTAAGCTTTCCTTGTTCTACTAATTGATAGTACCAATTTGCAAGCTAATTAAGCTTTTTGCTTGCTTGCTCTACCAAATTTGGGAGCTAATTAAGTTTGGTTGTGTTTGTGTGTTCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACGACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTGCCGCCACACGTTCCACCTCCACTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTATAGCGGATACTTGCATTATACTAGTATATACACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATAGAGAGATCAAGATTTTTCT]

[+] EMBL CB624903             [TTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCGTACGTTTACTAATCTCCTGCCAAAATCTGCATCCCCTACTGCAATTACAGTTCCATCTCGCAGCTGAGACGATGAATTTGCATTCATTCTTATTACTAATCCAACTTATCGTACCAATTAGCAATCCAATTAAGTTTATTTGCTGTACTAAAAAAAGATATGATTAAGCTTTCCTTGTTCTACTAATTGATAGTACCAATTTGCAAGCTAATTAAGCTTTTTGCTTGCTTGCTCTACCAAATTTGGGAGCTAATTAAGTTTGGTTGTGTTTGTGTGTTCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB624904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGAGCTAATTAAGTTTGGTTGTGTTTGTGTGTTCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACGACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTGCCGCCACACGTTCCACCTCCACTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTATAGCGGATACTTGCATTATACTAGTATATACACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATAGAGAGATCAAGATTTTTCT]


>consensus_11093#0 TTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCA AATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTC CTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAG GAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTT CGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGC GACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGC CATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAG CGTTCTCTACGTCGTACGTTTACTAATCTCCTGCCAAAATCTGCATCCCCTACTGCAATT ACAGTTCCATCTCGCAGCTGAGACGATGAATTTGCATTCATTCTTATTACTAATCCAACT TATCGTACCAATTAGCAATCCAATTAAGTTTATTTGCTGTACTAAAAAAAGATATGATTA AGCTTTCCTTGTTCTACTAATTGATAGTACCAATTTGCAAGCTAATTAAGCTTTTTGCTT GCTTGCTCTACCAAATTTGGGAGCTAATTAAGTTTGGTTGTGTTTGTGTGTTCAGCTTGA CGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCA GAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGAC GCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCC GGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACGA CCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCT GCCGGAGTGCCGCCACACGTTCCACCTCCACTGCATCGACAGCTGGCTGCTCAGGCACGC GTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGT CGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTA AGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAG GATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTC GTTTTGGCGTAGTACATATGTATAGCGGATACTTGCATTATACTAGTATATACACACACA CACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATA GAGAGATCAAGATTTTTCT



consensusID : consensus_11093#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1244
fasta sequence
                              [CAAGATTTTTTTTAGAGACGTACCCAACATCCACAAAGCTAGCTAGCTAGATCCTCCTCTTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACG-ACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTGCGGCCACACGTTCCACCTCCGCTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTTGCATTATACTAGTATATACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATAGAGAGATCCAGATTTTGTCTCAAAAAAAA]

[+] EMBL AK105338             [CAAGATTTTTTTTAGAGACGTACCCAACATCCACAAAGCTAGCTAGCTAGATCCTCCTCTTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACG ACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTGCGGCCACACGTTCCACCTCCGCTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTTGCATTATACTAGTATATACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATAGAGAGATCCAGA                 ]
[+] EMBL CB664260             [                                                       CCTCTTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGATAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAATGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCATATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB639539             [                                                       CCTCTTCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAAATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCCTACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGGAGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTCGTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCGACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCCATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGCGTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU068170             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGCCACGGGCATGCCGGCGGACG CATCGCCGCGCTCCCGGTCACCACGTTCGCCGCCGCCGCCG  GGNANCGNACCGCGCCGGCTGCTCCGTGTGCNTCCAGGACTTNGAGGACGGCGAGCGGGCGCGGAGGCTGCCGGAGTNCGGCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU166438             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GGAGTGCGGCCACACGTTCCACCTCCGCTGCATCGACAGCTGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTTGCATTATACTAGTATATACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACATAATAGAGAGATCCAGATTTTGTCTCAAAAAAAA]


>consensus_11093#1 CAAGATTTTTTTTAGAGACGTACCCAACATCCACAAAGCTAGCTAGCTAGATCCTCCTCT TCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAA ATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCC TACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGG AGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTC GTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCG ACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCC ATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGC GTTCTCTACGTCCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAG GTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTC AGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCC GCCGCCACGGGCATGCCGGCGGACGCCATCGCCGCGCTCCCGGTCACCACGTTCGCCGCC GCCGCCGGCGGCGACGACCGCGCCGGCTGCTCCGTGTGCCTCCAGGACTTGGAGGACGGC GAGCGGGCGCGGAGGCTGCCGGAGTGCGGCCACACGTTCCACCTCCGCTGCATCGACAGC TGGCTGCTCAGGCACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTC GCCGTCGACGACGTCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTC GTGGTTAATTAGGCTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCC GCCGGCGACGGCGTGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTC TTTTGATACCTTGATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTTGCATTATAC TAGTATATACACACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTT GTGATTAACATAATAGAGAGATCCAGATTTTGTCTCAAAAAAAA



consensusID : consensus_11093#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 327
fasta sequence
                              [CCGCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGGCCACGGGCATTCCGGCGGACGCATCGCCGGGGCTCCCGGTCACCACGTTCGGCGCCGGCGGCGGGGAGCGGACGGGCGGCGGCTGCTGGCGTGTGCCTTCAGGACTTGGGAGGACGGTGGAACGGGGGCGGAGGGTGGCGGGGAGTGG]

[+] EMBL OS0620A              [CCGCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGGCCACGGGCATTCCGGCGGACGCATCGCCGGGGCTCCCGGTCACCACGTTCGGCGCCGGCGGCGGGGAGCGGACGGGCGGCGGCTGCTGGCGTGTGCCTTCAGGACTTGGGAGGACGGTGGAACGGGGGCGGAGGGTGGCGGGGAGTGG]


>consensus_11093#2 CCGCAGCTTGACGTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGAT CCGGCGGTGCAGAACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAG AGCGCGCCGACGCTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGGC CACGGGCATTCCGGCGGACGCATCGCCGGGGCTCCCGGTCACCACGTTCGGCGCCGGCGG CGGGGAGCGGACGGGCGGCGGCTGCTGGCGTGTGCCTTCAGGACTTGGGAGGACGGTGGA ACGGGGGCGGAGGGTGGCGGGGAGTGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11093#0      -----------------------------------------------------------T 1
consensus_11093#1      CAAGATTTTTTTTAGAGACGTACCCAACATCCACAAAGCTAGCTAGCTAGATCCTCCTCT 60
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      TCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAA 61
consensus_11093#1      TCTCTGCACTCTGCTAGAGCAAGCTCGATCGATCGATCAGTGATATTTCCCCTTATCCAA 120
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      ATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCC 121
consensus_11093#1      ATCCAGCACAAACCAACAATATCCATGGAGGCCGTAGCAGTGCACGCCAGCTTCTCGTCC 180
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      TACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGG 181
consensus_11093#1      TACTCCCCTCCGGTGGTCGCCGGCGGCCGCGACGACGCCGGCAGCAGCAGCAGCAGCAGG 240
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      AGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTC 241
consensus_11093#1      AGCATGTCCCGCCTGCCGGCTCGCGTCGCCGGCGCCGTAGCTCGCGGCATCGTCACCTTC 300
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      GTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCG 301
consensus_11093#1      GTCTTCGCCACAGTGGGCACGATCCTGGGGGCGATCACCGGCGGGCTGATCGGGCTGGCG 360
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      ACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCC 361
consensus_11093#1      ACGGAGAGCGGCATGGTGCGGGGCACCGGGATCGGGGCCATCTCCGGCGCGGTGGTCGCC 420
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      ATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGC 421
consensus_11093#1      ATGGAGGTCGTCGACTCCTCCGTCGCCATGTGGTGCTCCCACGACTCCGGGATCTGGAGC 480
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      GTTCTCTACGTCGTACGTTTACTAATCTCCTGCCAAAATCTGCATCCCCTACTGCAATTA 481
consensus_11093#1      GTTCTCTACGTC------------------------------------------------ 492
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      CAGTTCCATCTCGCAGCTGAGACGATGAATTTGCATTCATTCTTATTACTAATCCAACTT 541
consensus_11093#1      ------------------------------------------------------------
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      ATCGTACCAATTAGCAATCCAATTAAGTTTATTTGCTGTACTAAAAAAAGATATGATTAA 601
consensus_11093#1      ------------------------------------------------------------
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      GCTTTCCTTGTTCTACTAATTGATAGTACCAATTTGCAAGCTAATTAAGCTTTTTGCTTG 661
consensus_11093#1      ------------------------------------------------------------
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      CTTGCTCTACCAAATTTGGGAGCTAATTAAGTTTGGTTGTGTTTGTGTGTTCAGCTTGAC 721
consensus_11093#1      ------------------------------------------------------CTTGAC 498
consensus_11093#2      ------------------------------------------------CCGCAGCTTGAC 12
                                                                             ******

consensus_11093#0      GTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAG 781
consensus_11093#1      GTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAG 558
consensus_11093#2      GTGATCTGGAGCCTCCTGACGGGGCGGCTGGTGCGGGAGAAGGTGGATCCGGCGGTGCAG 72
                       ************************************************************

consensus_11093#0      AACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACG 841
consensus_11093#1      AACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACG 618
consensus_11093#2      AACGCGGTGGACAGCCAGATGAACGCCGCCGACGCGCCCTTCAGGGAGAGCGCGCCGACG 132
                       ************************************************************

consensus_11093#0      CTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCG-CCACGGGCATGCC 900
consensus_11093#1      CTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCG-CCACGGGCATGCC 677
consensus_11093#2      CTGGCGGAGATGTTCGACACCGGCATCCCCGGCGTCGCCGCCGCCGGCCACGGGCATTCC 192
                       ********************************************** ********** **

consensus_11093#0      GGCGGACGCCATCGCCGCG-CTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACG 959
consensus_11093#1      GGCGGACGCCATCGCCGCG-CTCCCGGTCACCACGTTCGCCGCCGCCGCCGGCGGCGACG 736
consensus_11093#2      GGCGGACGC-ATCGCCGGGGCTCCCGGTCACCACGTTCGGCGCCGGCGGCGGGGAGCGGA 251
                       ********* ******* * ******************* ***** ** *** *      

consensus_11093#0      ACCGCGCCGGCTGCTC-CGTGTGCCTCCAGGACTTGG-AGGACGGCG-AGCGGGCGCGGA 1016
consensus_11093#1      ACCGCGCCGGCTGCTC-CGTGTGCCTCCAGGACTTGG-AGGACGGCG-AGCGGGCGCGGA 793
consensus_11093#2      CGGGCGGCGGCTGCTGGCGTGTGCCTTCAGGACTTGGGAGGACGGTGGAACGGGGGCGGA 311
                          *** ********  ********* ********** ******* * * **** *****

consensus_11093#0      GGCTGCCGGAGTGCCGCCACACGTTCCACCTCCACTGCATCGACAGCTGGCTGCTCAGGC 1076
consensus_11093#1      GGCTGCCGGAGTGCGGCCACACGTTCCACCTCCGCTGCATCGACAGCTGGCTGCTCAGGC 853
consensus_11093#2      GGGTGGCGGGGAGTGG-------------------------------------------- 327
                       ** ** *** * *  *                                            

consensus_11093#0      ACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACG 1136
consensus_11093#1      ACGCGTCGTGCCCCCTGTGCCGGCGCACGGTGGTCGCCGCCGCCGTCGCCGTCGACGACG 913
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      TCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGG 1196
consensus_11093#1      TCGTCGTCGGCTGAGCTGGCGCGAGCTCGCATCTGGTTGGCTCGTTCGTGGTTAATTAGG 973
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      CTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCG 1256
consensus_11093#1      CTTAAGCTAGAAGATTAGTGAGAAGGGCGTGCAGTGCACGGCACGCCGCCGGCGACGGCG 1033
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      TGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTG 1316
consensus_11093#1      TGAGGATCACGACTGACGTGCGTGTGTGTACCTACTACCTCACCTTCTTTTGATACCTTG 1093
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      ATTCGTTTTGGCGTAGTACATATGTATAGCGGATACTTGCATTATACTAGTATATACACA 1376
consensus_11093#1      ATTCGTTTTGGCGTAGTACATATGTGTAGCGGATACTTGCATTATACTAGTATATACACA 1153
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      CACACACTTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACAT 1436
consensus_11093#1      CACAC--TTGTATGTATTGTAGATTTATATACTTGTACATGGAGACCTTGTGATTAACAT 1211
consensus_11093#2      ------------------------------------------------------------
                                                                                   

consensus_11093#0      AATAGAGAGATCAAGATTTT-TCT--------- 1459
consensus_11093#1      AATAGAGAGATCCAGATTTTGTCTCAAAAAAAA 1244
consensus_11093#2      ---------------------------------
                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)