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Oryza sativa
cluster # 11098 cluster # 11098       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11098#0 length = 1072 sequences # 4  
consensus_11098#1 length = 790 sequences # 2  
consensus_11098#2 length = 503 sequences # 1  
consensus_11098#3 length = 281 sequences # 1  

consensusID : consensus_11098#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1072
fasta sequence
                              [TTCATTTATTCATTCGTTCCTCTTCTCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGATCACCTACTTTTTTCGGAGGCCATCTATTGGTGGTATAGTGTTTTTCAAAGTGCCCACGACCTTACAGAATTATGGCGTAAATAAGGATGTTGTGTTCATCAAGAGGATATTGGCAACTCCTGGAGATTTCATTGAGGTTCGGCAAGGACAGCTTATTATAAATGGTGTTGCACGAAAAGAACATTACACAGCAAGCCATGCATCATACACTATGGAAGCAATGCGCCTTCCTGAAGGCCACGTATTTGTCATGGGTGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGACGAAGAAGATTGATGACCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCAGGCTGCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGTTAGTATTTGTCGCATGCCTTAACGGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAAAAAAAAAAAAAAA]

[+] EMBL CF333069             [TTCATTTATTCATTCGTTCCTCTTCTCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGATCACCTACTTTTTTCGGAGGCCATCTATTGGTGGTATAGTGTTTTTCAAAGTGCCCACGACCTTACAGAATTATGGCGTAAATAAGGATGTTGTGTTCATCAAGAGGATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK066708             [ TCATTTATTCATTCGTTCCTCTTCTCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGATCACCTACTTTTTTCGGAGGCCATCTATTGGTGATATAGTGTTTTTCAAAGTGCCCACGACCTTACAGAATTATGGCGTAAATAAGGATGTTGTGTTCATCAAGAGGATATTGGCAACTCCTGGAGATTTCATTGAGGTTCGGCAAGGACAGCTTATTATAAATGGTGTTGCACGAAAAGAACATTACACAGCAAGCCATGCATCATACACTATGGAAGCAATGCGCCTTCCTGAAGGCCACGTATTTGTCATGGGTGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGACGAAGAAGATTGATGACCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCAGGCTGCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGTTAGTATTTGTCGCATGCCTTAACGGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAAcat          ]
[-] EMBL CF333070             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TATGGCGTAAATAAGGATGTTGTGTTCATCAAGAGGATATTGGCAACTCCTGGAGATTTCATTGAGGTTCGGCAAGGACAGCTTATTATAAATGGTGTTGCACGAAAAGAACATTACACAGCAAGCCATGCATCATACACTATGGAAGCAATGCGCCTTCCTGAAGGCCACGTATTTGTCATGGGTGATAACCGTAATAACAGCTGCGATTTTCGTGCCTGGGGACCGCTTCCTATCAGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGACGAAGAAGATTGATGACCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCAGGCTGCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGTTAGTATTTGTCGCATGCCTTAACGGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAAAAAAAAAAAAAAA]
[+] EMBL CA753950             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCAGGCTGCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGTTAGTATTTGTCGCATGCCTTAACGGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAAAAAAAAAAAAAAA]


>consensus_11098#0 TTCATTTATTCATTCGTTCCTCTTCTCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCC CCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGA GGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCT GTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCA CTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCT CGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCAT GGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGATCACCTACTTTTTTCG GAGGCCATCTATTGGTGGTATAGTGTTTTTCAAAGTGCCCACGACCTTACAGAATTATGG CGTAAATAAGGATGTTGTGTTCATCAAGAGGATATTGGCAACTCCTGGAGATTTCATTGA GGTTCGGCAAGGACAGCTTATTATAAATGGTGTTGCACGAAAAGAACATTACACAGCAAG CCATGCATCATACACTATGGAAGCAATGCGCCTTCCTGAAGGCCACGTATTTGTCATGGG TGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAGCAATAT AATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGA CGAAGAAGATTGATGACCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTG ATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCAGGCTGCCAGATGGGTGGAGCCTG CAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTT GGTTTTAGGCGTCGGTACACGTTAGTATTTGTCGCATGCCTTAACGGCAGTATGCATTTC GCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAAAAAAAAAAAAAAA



consensusID : consensus_11098#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 790
fasta sequence
                              [TCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGGTCTGTCTACTAGCCCTCACCCTACCCTAGATCGGCTATTACACCCAAATCTGTATTTTCCTTTTTTTTTTCTTCCCAGATAAAGGGAAGGGAGATAGTATTTCATTACTAGATTATTATTATTACTACTGATTTTTGACCGAACGATGCACTCTCTAGTAGTACTTCACCCCGGACATACTCCCTCCGTCCCAAATTATAAGGCCTATATTCGATGACATACTTTGACCGTTAATTTATTTAATATTATGTTCCTAACAAATATAAAATTAATATCATATGAAAGTTCATTAAAATATGAATATAATGATATAATATGCATAGTACTTAATATATATGTATATATATATATATATATATATGTGTATATATATATGTGTGTGTGTATATATGTGTGTGGGTACACACTACT]

[+] EMBL CB682891             [TCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGGTCTGTCTACTAGCCCTCACCCTACCCTAGATCGGCTATTACACCCAAATCTGTATTTTCCTTTTTTTTTTCTTCCCAGATAAAGGGAAGGGAGATAGTATTTCATTACTAGATTATTATTATTACTACTGATTTTTGACCGAACGATGCACTCTCTAGTAGTACTTCACCCCGGACATACTCCCTCCGTCCCAAATTATAAGGCCTATATTCGATGACATACTTTGACCGTTAATTTATTTAATATTATGTTCCTAACAAATATAAAATTAATATCATATGAAAGTTCATTAAAATATGAATATAATGATATAATATGCATAGTACTTAATATATATGTATATATATATATATATATATATGTGTATATATATATGTGTGTGTGTATATATGTGTGTGGGTACACACTACT]
[+] EMBL CB676331             [                                                                 taAAGAGACAGCA AAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCCCCCCAAGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGGTCTGTCTACTAGCCCTCACCCTACCCTAGATCGGCTATTACACCCAAATCTGTATTTTCCTTTTTTTTTTCTTCCCAGATAAAGGGAAGGGAGATAGTATTTCATTACTAGATTATTATTATTACTACTGATTTTTGACCGAACGATGCACTCTCTAGTAGTACTTCACCCCGGACATACTCCCTCCGTCCCCAATTATAAGGCCTATATTCGATGACATACTTTGACCGTTAATTTATTTAATATTATGTTCCTAACATATATAGAATTATTATCCTATGAAAGTTCATTTAAATATGA                                                                                                               ]


>consensus_11098#1 TCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAAT TAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCT CCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGC ACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGC TGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCC CTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGAC CGCGCCGTCGCCGAAAGGGTCTGTCTACTAGCCCTCACCCTACCCTAGATCGGCTATTAC ACCCAAATCTGTATTTTCCTTTTTTTTTTCTTCCCAGATAAAGGGAAGGGAGATAGTATT TCATTACTAGATTATTATTATTACTACTGATTTTTGACCGAACGATGCACTCTCTAGTAG TACTTCACCCCGGACATACTCCCTCCGTCCCAAATTATAAGGCCTATATTCGATGACATA CTTTGACCGTTAATTTATTTAATATTATGTTCCTAACAAATATAAAATTAATATCATATG AAAGTTCATTAAAATATGAATATAATGATATAATATGCATAGTACTTAATATATATGTAT ATATATATATATATATATATGTGTATATATATATGTGTGTGTGTATATATGTGTGTGGGT ACACACTACT



consensusID : consensus_11098#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 503
fasta sequence
                              [GGATCCTGTACTAAAGCCATGTATGATCCTGCAGCGCCTTCCTGAAGGCCACGTATTTGTCATGGGCGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGACGAAGAAGATTGATGACTCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCACGGCTGCCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGCTTAGTATTTGTCGCATCCTTAACGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAACATCCAGTGCTCCNACCTTTTTCAATAAAAAAAAAA]

[+] EMBL BM038046             [GGATCCTGTACTAAAGCCATGTATGATCCTGCAGCGCCTTCCTGAAGGCCACGTATTTGTCATGGGCGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTACCAAGACGAAGAAGATTGATGACTCCCAAGGACTGCAAACTACCTGATGCTGTTTGATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCACGGCTGCCCAGATGGGTGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACTGGCATGGTTGGTTTTAGGCGTCGGTACACGCTTAGTATTTGTCGCATCCTTAACGCAGTATGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAACATCCAGTGCTCCNACCTTTTTCAATAAAAAAAAAA]


>consensus_11098#2 GGATCCTGTACTAAAGCCATGTATGATCCTGCAGCGCCTTCCTGAAGGCCACGTATTTGT CATGGGCGATAACCGTAATAACAGCTGCGATTCTCGTGCCTGGGGACCGCTTCCTATCAG CAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGGTA CCAAGACGAAGAAGATTGATGACTCCCAAGGACTGCAAACTACCTGATGCTGTTTGATAT TATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCACGGCTGCCCAGATGGG TGGAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTTTTCGACT GGCATGGTTGGTTTTAGGCGTCGGTACACGCTTAGTATTTGTCGCATCCTTAACGCAGTA TGCATTTCGCTTGAAACTATCTATTTTAGTGAATCAGTTCAGGAGAACATCCAGTGCTCC NACCTTTTTCAATAAAAAAAAAA



consensusID : consensus_11098#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 281
fasta sequence
                              [CTGATGCTGTTTGANATTATGGTGATAAGTTGANAACGATCGAGTTGTATGGAAACTANCAGGCTGCCANATGGGTGGAGCCTGCAAATTGTATCAGTANCCCTGTAGTAGGTTGGGAAAANGAACTTTTNGACTGGCATGGTTGGTTTTAGGNGTCGGNACACGTTAGTATTTNTNGCATGCCTTAACGGCAGTATGCATTTCGCTTNAAACTATNTATTTTAGTGAATCAGTTCAGGAGAACATCCAGTGCTCCAACCTTTTTCAAAAAAAAAAAAAAA]

[-] EMBL AU176397             [CTGATGCTGTTTGANATTATGGTGATAAGTTGANAACGATCGAGTTGTATGGAAACTANCAGGCTGCCANATGGGTGGAGCCTGCAAATTGTATCAGTANCCCTGTAGTAGGTTGGGAAAANGAACTTTTNGACTGGCATGGTTGGTTTTAGGNGTCGGNACACGTTAGTATTTNTNGCATGCCTTAACGGCAGTATGCATTTCGCTTNAAACTATNTATTTTAGTGAATCAGTTCAGGAGAACATCCAGTGCTCCAACCTTTTTCAAAAAAAAAAAAAAA]


>consensus_11098#3 CTGATGCTGTTTGANATTATGGTGATAAGTTGANAACGATCGAGTTGTATGGAAACTANC AGGCTGCCANATGGGTGGAGCCTGCAAATTGTATCAGTANCCCTGTAGTAGGTTGGGAAA ANGAACTTTTNGACTGGCATGGTTGGTTTTAGGNGTCGGNACACGTTAGTATTTNTNGCA TGCCTTAACGGCAGTATGCATTTCGCTTNAAACTATNTATTTTAGTGAATCAGTTCAGGA GAACATCCAGTGCTCCAACCTTTTTCAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      TTCATTTATTCATTCGTTCCTCTTCTCTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCC 60
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      CCAAGGCCCCAACTCAGTCCCCAATTAAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGA 120
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GGAGACGAGCATGGCGATGGGGCCTCCGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCT 180
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GTCAGTGGACGCCTGGCTTCCCTGCACCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCA 240
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      CTTCCACTGCCGCCTCCACCTTCGCTGGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCT 300
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      CGCCCTTCTCCTCGTCTCCGCCGCCCTCGCCGAGGTCCGCTACATCGCCTCCTCCTCCAT 360
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GGCCCCCACGCTCCGCCCCGCCGACCGCGCCGTCGCCGAAAGGATCACCTACTTTTTTCG 420
consensus_11098#1      ------------------------------------------------------------
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GAGGCCATCTATTGGTGGTATAGTGTTTTTCAAAGTGCCCACGACCTTACAGAATTATGG 480
consensus_11098#1      -----------------------------------------------------------T 1
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      CGTAAATAAGGATGTTGTGTTCATCAAGAGGATATTGGCAACTCCTGGAGATTTCATTGA 540
consensus_11098#1      CTCTCTGTCGTCGTCGTCTTCTCTCCTCGAACCCCCAAGGCCCCAACTCAGTCCCCAATT 61
                                                                                   

consensus_11098#2      -------------------------------------------------------GGATC 5
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GGTTCGGCAAGGACAGCTTATTATAAATGGTGTTGCACGAAAAGAACATTACACAGCAAG 600
consensus_11098#1      AAAAAGAAGAGAAAGCACAAGAGGAGGAGGAGGAGGAGACGAGCATGGCGATGGGGCCTC 121
                                                                                   

consensus_11098#2      CTGTACTAAAGCCATGTATGATCCTGCAGCGCCTTCCTGAAGGCCACGTATTTGTCATGG 65
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      CCATGCATCATACAC-TATGGAAGCAATGCGCCTTCCTGAAGGCCACGTATTTGTCATGG 659
consensus_11098#1      CGCGCCTCCTGCGGGGCCTGATTCCGCAGCTCCTGTCAGTGGACGCCTGGCTTCCCTGCA 181
                                                                                   

consensus_11098#2      GCGATAACCGT-AATAACAGCTGCGATTCTCGTGCCTGGGG-ACCGCTTCC-----TATC 118
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      GTGATAACCGT-AATAACAGCTGCGATTCTCGTGCCTGGGG-ACCGCTTCC-----TATC 712
consensus_11098#1      CCTGCAGCAGCCGGCTGCAGCTGCTGCTCTCCCACTTCCACTGCCGCCTCCACCTTCGCT 241
                                                                                   

consensus_11098#2      AGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGG 178
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      AGCAATATAATTGGAAGATACATGATGTCCTTTACAAGGTCCTCCATCCAATAACCAAGG 772
consensus_11098#1      GGCCCTCCTGCGCCGACGCCTTCAAGCTCCTTCTCGCCCTTCTCCTCGTCTCCGCCGCCC 301
                                                                                   

consensus_11098#2      T-ACCAAGACGAAGAAGATTGATGACT--CCCAAGGACTGCAAACTACCTGATGCTGTTT 235
consensus_11098#3      ------------------------------------------------CTGATGCTGTTT 12
consensus_11098#0      T-ACCAAGACGAAGAAGATTGATGAC---CCCAAGGACTGCAAACTACCTGATGCTGTTT 828
consensus_11098#1      TCGCCGAGGTCCGCTACATCGCCTCCTCCTCCATGGCCCCCACGCTCCGCCCCGCCGACC 361
                                                                            ** *   

consensus_11098#2      GATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCACGGCTGCCC-A 294
consensus_11098#3      GANATTATGGTGATAAGTTGANAACGATCGAGTTGTATGGAAACTANCA-GGCTGCC--A 69
consensus_11098#0      GATATTATGGTGATAAGTTGATAACGATCGAGTTGTATGGAAACTAGCA-GGCTGCC--A 885
consensus_11098#1      GCGCCGTCGCCGAAAGGGTCTGTCTACTAGCCCTCACCCTACCCTAGATCGGCTATTACA 421
                       *       *  ** * * *        * *   *      *  ***    ****     *

consensus_11098#2      GATGGGTG-GAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTT 353
consensus_11098#3      NATGGGTG-GAGCCTGCAAATTGTATCAGTANCCCTGTAGTAGGTTGGGAAAANGAACTT 128
consensus_11098#0      GATGGGTG-GAGCCTGCAAATTGTATCAGTAGCCCTGTAGTAGGTTGGGAGAAGGAACTT 944
consensus_11098#1      CCCAAATCTGTATTTTCCTTTTTTTTTTCTTCCCAGATAAAGGGAAGGGAGATAGTATTT 481
                             *  *    * *   ** * *   *  **   **   **  **** *  * * **

consensus_11098#2      TTCGACTGG--CATGGTTGGTTTTAGGCGTCGGTACACGCTTAGTA---TTTGTCGCAT- 407
consensus_11098#3      TTNGACTGG--CATGGTTGGTTTTAGGNGTCGGNACACG-TTAGTA---TTTNTNGCATG 182
consensus_11098#0      TTCGACTGG--CATGGTTGGTTTTAGGCGTCGGTACACG-TTAGTA---TTTGTCGCATG 998
consensus_11098#1      CATTACTAGATTATTATTATTACTACTGATTTTTGACCGAACGATGCACTCTCTAGTAGT 541
                           *** *   **  **  *  **    *       **     *    * * * * *  

consensus_11098#2      CCTTAACG-CAG---TATGCATTTCGCTTGAAACTAT-----CTAT-TTTAGTGAATCAG 457
consensus_11098#3      CCTTAACGGCAG---TATGCATTTCGCTTNAAACTAT-----NTAT-TTTAGTGAATCAG 233
consensus_11098#0      CCTTAACGGCAG---TATGCATTTCGCTTGAAACTAT-----CTAT-TTTAGTGAATCAG 1049
consensus_11098#1      ACTTCACCCCGGACATACTCCCTCCGTCCCAAATTATAAGGCCTATATTCGATGACATAC 601
                        *** **  * *   **  *  * **    *** ***      *** **   ***   * 

consensus_11098#2      TTCAGG----AGAACATCCAGTGCTCCNACCTTTTTCAATAAAAAAAAAA---------- 503
consensus_11098#3      TTCAGG----AGAACATCCAGTGCTCCAACCTTTTTCAAAAAAAAAAAAAAA-------- 281
consensus_11098#0      TTCAGG----AGAAAAAAAAAAAAAAA--------------------------------- 1072
consensus_11098#1      TTTGACCGTTAATTTATTTAATATTATGTTCCTAACAAATATAAAATTAATATCATATGA 661
                       **        *    *   *                                        

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      ------------------------------------------------------------
consensus_11098#1      AAGTTCATTAAAATATGAATATAATGATATAATATGCATAGTACTTAATATATATGTATA 721
                                                                                   

consensus_11098#2      ------------------------------------------------------------
consensus_11098#3      ------------------------------------------------------------
consensus_11098#0      ------------------------------------------------------------
consensus_11098#1      TATATATATATATATATATGTGTATATATATATGTGTGTGTGTATATATGTGTGTGGGTA 781
                                                                                   

consensus_11098#2      ---------
consensus_11098#3      ---------
consensus_11098#0      ---------
consensus_11098#1      CACACTACT 790
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)