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Oryza sativa
cluster # 11103 cluster # 11103       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11103#0 length = 1253 sequences # 5  
consensus_11103#1 length = 989 sequences # 1  
consensus_11103#2 length = 770 sequences # 2  

consensusID : consensus_11103#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1253
fasta sequence
                              [CCCCAACATATTAGGGCTCACGCCTCCCAAAGTCAAAACAGCCCAGCCCGAACAAGCATTTCCTCGAACACTTCGCCCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTCTCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCCCTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGCATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATCGCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAGCTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTCCCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCCGGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGG-CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTC-CCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTGGGCAATGGCTATTTTTCAGGATCGTTCAGTTGAGATAAACATGTTTTGCTGTTCAGATGAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068955             [CCCCAACATATTAGGGCTCACGCCTCCCAAAGTCAAAACAGCCCAGCCCGAACAAGCATTTCCTCGAACACTTCGCCCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTCTCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCCCTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCACGCTGGCATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATCGCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAGCTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTCCCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCCGGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGG CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTC CCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAA                                                                                                                                    ]
[+] EMBL AK058459             [ CCCAACATATTAGGGCTCACGCCTCCCAAAGTCAAAACAGCCCAGCCCGAACAAGCATTTCCTCGAACACTTCGCCCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTCTCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCCCTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGCATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATCGCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAGCTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTCCCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCCGGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGG CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTC CCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTGGGCAATGGCTATTTTTCAGGATCGTTCAGTTGAGATAAACATGTTTTGCTGTTCA                       ]
[+] EMBL CB656411             [                                                                     ACTTCCCTCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTCTCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCCCTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGCATCCTCTCCGCCGCACCGAAGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATCGCGGACGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAGCTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTCCCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGACGCCAAGGCCGGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTCGAGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGAGAGCTCGCCCGCGCCATGGG CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGACTCGGCGTGCGGTC CCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAACGTGCTCAACCTCGAGGAGGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK104130             [                                                                                                GCCGCCTCCACCCTCGCCTCCCTCTCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCCCTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGCATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATCGCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAGCTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTCCCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCCGGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGG CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTC CCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTG                                                                              ]
[+] EMBL AU077530             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CGGCGAGCTNGCCCGCGCCATGGGCCNTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCNCCGC  CTACGCGCT CTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGNTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTGGGCAATGGCTATTTTTCAGGATCGTTCAGTTGAGATAAACATGTTTTGCTGTTCAGATGAAAAAAAAAAAAAAAAAAA]


>consensus_11103#0 CCCCAACATATTAGGGCTCACGCCTCCCAAAGTCAAAACAGCCCAGCCCGAACAAGCATT TCCTCGAACACTTCGCCCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTC TCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCC CTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGC ATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATC GCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAG CTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTC CCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCC GGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTC GTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGAC GGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCC GGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTG CTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCG CTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCG GTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAAC AATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACA TAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGT AACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGG CTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGAC TATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTGGGCAATGGCTATTTTTCAGGATCGT TCAGTTGAGATAAACATGTTTTGCTGTTCAGATGAAAAAAAAAAAAAAAAAAA



consensusID : consensus_11103#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 989
fasta sequence
                              [CGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTAGAATGGTGAGGCTGTGATGTGTTCTAAAGCTGAATAAACGTGCTGTGGTGAATACTGGGACCAGATCAGACTATGGAGTAATGAGGAGATTTTGCTTGGTTGATTGGGCGATGGCTATTTGTGACGATCCTGTGATGGTAAATAAAAAAAAAAAAGAGAAAAAACCGGAGGGGGGGCCCGGTTCCCATGCGAGCCTAACGAGATGGGAGCCCCCCCTCCTGACCGGTGTAACACGGAGAGTGGAAACCCTGGATGCCGCCTTACCGGTGAACTCCCTTTGTGCCTCGCTTCTTCTCAACCTCGCCGCCCGGAGTAGGGCCACGTGTCCTATCGACGCCGCCGCCAGCGGGCGGGGACCGACCTATGACGCTGCGCCCTCCGTCCGGTTGTTGGTACGTGCGTCTGACCCGCACTATTAAGTCGCCCCCC]

[+] EMBL BE040697             [CGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTAGAATGGTGAGGCTGTGATGTGTTCTAAAGCTGAATAAACGTGCTGTGGTGAATACTGGGACCAGATCAGACTATGGAGTAATGAGGAGATTTTGCTTGGTTGATTGGGCGATGGCTATTTGTGACGATCCTGTGATGGTAAATAAAAAAAAAAAAGAGAAAAAACCGGAGGGGGGGCCCGGTTCCCATGCGAGCCTAACGAGATGGGAGCCCCCCCTCCTGACCGGTGTAACACGGAGAGTGGAAACCCTGGATGCCGCCTTACCGGTGAACTCCCTTTGTGCCTCGCTTCTTCTCAACCTCGCCGCCCGGAGTAGGGCCACGTGTCCTATCGACGCCGCCGCCAGCGGGCGGGGACCGACCTATGACGCTGCGCCCTCCGTCCGGTTGTTGGTACGTGCGTCTGACCCGCACTATTAAGTCGCCCCCC]


>consensus_11103#1 CGTGGCCTGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGG CGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGG CGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGC GCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCAC CACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCC TCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCG CTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTC GTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATG AGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGT AACAGAGTTCCTTTCATGTAGAATGGTGAGGCTGTGATGTGTTCTAAAGCTGAATAAACG TGCTGTGGTGAATACTGGGACCAGATCAGACTATGGAGTAATGAGGAGATTTTGCTTGGT TGATTGGGCGATGGCTATTTGTGACGATCCTGTGATGGTAAATAAAAAAAAAAAAGAGAA AAAACCGGAGGGGGGGCCCGGTTCCCATGCGAGCCTAACGAGATGGGAGCCCCCCCTCCT GACCGGTGTAACACGGAGAGTGGAAACCCTGGATGCCGCCTTACCGGTGAACTCCCTTTG TGCCTCGCTTCTTCTCAACCTCGCCGCCCGGAGTAGGGCCACGTGTCCTATCGACGCCGC CGCCAGCGGGCGGGGACCGACCTATGACGCTGCGCCCTCCGTCCGGTTGTTGGTACGTGC GTCTGACCCGCACTATTAAGTCGCCCCCC



consensusID : consensus_11103#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 770
fasta sequence
                              [TGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTGTGCTTGGTTAAAAAAAAACAATCTTTTATACTAAGCAGAACAAAATAATTTCCCTCGGGGGGGGGCCCGGGACCCAATCCGCCCTATATGAGTCGTATAACCCCCGCCCATTGGCCGTGTTGAAA]

[+] EMBL CA756972             [TGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTGTGCTTGGTTAAAAAAAAACAATCTTTTATACTAAGCAGAACAAAATAATTTCCCTCGGGGGGGGGCCCGGGACCCAATCCGCCCTATATGAGTCGTATAACCCCCGCCCATTGGCCGTGTTGAAA]
[+] EMBL AU077529             [                                                    GCGTCGGCGACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATNCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACATAGTGTGCA                                                                                                                                                                                                                                                                                                                             ]


>consensus_11103#2 TGCGTCTCCGTCAACGACGCGTTCGTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGC GACGAGGTGCTCCTCCTCTCCGACGGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAG CTCGACCTCTCCGACAAGCCCGCCGGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTG GCGGAGGACGGCGTCGTCAAGGTGCTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGC AGCGCCGAGGAGATGCTCAAGGCGCTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTT TTCATCTCAAATCTCCATAGCTCGGTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTT TCCTGAATAATAAATCATGGCAACAATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGA TGTGTGAAGCTTCTATAGCGAACATAGTGTGCAATTTTTAGGTAACATATATGAGTCTTG GCCTTGCACTGTTTGTCAGGTAGTAACAACTTGGCACAGCTATAGACTGTAGTAACAGAG TTCCTTTCATGTTGAATGGTGAGGCTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTG GTAAATACTGTCACCAGATCAGACTATGGAGTAGTAGTAAGATTGTGCTTGGTTAAAAAA AAACAATCTTTTATACTAAGCAGAACAAAATAATTTCCCTCGGGGGGGGGCCCGGGACCC AATCCGCCCTATATGAGTCGTATAACCCCCGCCCATTGGCCGTGTTGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11103#0      CCCCAACATATTAGGGCTCACGCCTCCCAAAGTCAAAACAGCCCAGCCCGAACAAGCATT 60
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      TCCTCGAACACTTCGCCCTCCACCACCATGGCCGCCGCCGCCTCCACCCTCGCCTCCCTC 120
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      TCCGCCACCGCGGCCGCGGCCGCCGGCAAGCGCCTCCTCCTCTCCTCCCCCTCCCGCTCC 180
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      CTCTCCCTCTCCCTCGCCTCCCGCGGCCGCATCGCCGTCATGCCCCACCTCCGCGCTGGC 240
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      ATCCTCTCCGCCGCACCGAGGAGGGCGGTGTCGGCCTCGGCCCCGGCCGCGGCCACCATC 300
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      GCGGTCGGGGACAAGCTCCCCGACGCGACGCTCTCCTACTTCGACTCGCCCGACGGGGAG 360
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      CTGAAGACGGTGACCGTGCGCGACCTCACCGCCGGGAAGAAGGTGGTCCTCTTCGCGGTC 420
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      CCCGGCGCGTTCACCCCGACCTGCACGCAGAAGCACGTCCCGGGGTTCGTCGCCAAGGCC 480
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      ------------------------------------------------------------
                                                                                   

consensus_11103#0      GGGGAGCTCCGCGCCAAGGGGGTCGACGCCGTGGCCTGCGTCTCCGTCAACGACGCGTTC 540
consensus_11103#2      ------------------------------------TGCGTCTCCGTCAACGACGCGTTC 24
consensus_11103#1      -----------------------------CGTGGCCTGCGTCTCCGTCAACGACGCGTTC 31
                                                           ************************

consensus_11103#0      GTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGAC 600
consensus_11103#2      GTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGAC 84
consensus_11103#1      GTGATGCGGGCGTGGAAGGAGAGCCTCGGCGTCGGCGACGAGGTGCTCCTCCTCTCCGAC 91
                       ************************************************************

consensus_11103#0      GGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCC 660
consensus_11103#2      GGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCC 144
consensus_11103#1      GGCAACGGCGAGCTCGCCCGCGCCATGGGCGTCGAGCTCGACCTCTCCGACAAGCCCGCC 151
                       ************************************************************

consensus_11103#0      GGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTG 720
consensus_11103#2      GGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTG 204
consensus_11103#1      GGCCTCGGCGTGCGGTCCCGCCGCTACGCGCTCCTGGCGGAGGACGGCGTCGTCAAGGTG 211
                       ************************************************************

consensus_11103#0      CTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCG 780
consensus_11103#2      CTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCG 264
consensus_11103#1      CTCAACCTCGAGGAGGGCGGCGCCTTCACCACCAGCAGCGCCGAGGAGATGCTCAAGGCG 271
                       ************************************************************

consensus_11103#0      CTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCG 840
consensus_11103#2      CTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCG 324
consensus_11103#1      CTCTGAAGCGTGAACAACTCAAGCCATCCTCCACTTTTCATCTCAAATCTCCATAGCTCG 331
                       ************************************************************

consensus_11103#0      GTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAAC 900
consensus_11103#2      GTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAAC 384
consensus_11103#1      GTTCGTTGCCTACTTCTCTCAAGTGTTCGCTTCTTTTCCTGAATAATAAATCATGGCAAC 391
                       ************************************************************

consensus_11103#0      AATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACA 960
consensus_11103#2      AATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACA 444
consensus_11103#1      AATGGTGGACCGTGCAGAGTAGTGTTGTCGTTTTGATGTGTGAAGCTTCTATAGCGAACA 451
                       ************************************************************

consensus_11103#0      TAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGT 1020
consensus_11103#2      TAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGT 504
consensus_11103#1      TAGTGTGCAATTTTTAGGTAACATATATGAGTCTTGGCCTTGCACTGTTTGTCAGGTAGT 511
                       ************************************************************

consensus_11103#0      AACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGG 1080
consensus_11103#2      AACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTTGAATGGTGAGG 564
consensus_11103#1      AACAACTTGGCACAGCTATAGACTGTAGTAACAGAGTTCCTTTCATGTAGAATGGTGAGG 571
                       ************************************************ ***********

consensus_11103#0      CTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGAC 1140
consensus_11103#2      CTGTGATGTGTTCTAGAGCTGAATAAACGTGCTCTGGTAAATACTGTCACCAGATCAGAC 624
consensus_11103#1      CTGTGATGTGTTCTAAAGCTGAATAAACGTGCTGTGGTGAATACTGGGACCAGATCAGAC 631
                       *************** ***************** **** *******  ************

consensus_11103#0      TATGGAGTAGTAGTAAGATTTTGCTTGGTTAATTGGGCAATGGCTATTTTTCAGGATCGT 1200
consensus_11103#2      TATGGAGTAGTAGTAAGATTGTGCTTGGTTAA----AAAAAAACAATCTTTTATACTAAG 680
consensus_11103#1      TATGGAGTAATGAGGAGATTTTGCTTGGTTGATTGGGCGATGGCTATTTGTGACGATCCT 691
                       ********* *    ***** ********* *       *   * ** * * *   *   

consensus_11103#0      TCAGTTG-AGATAAACATGTTTTGCTGTTCAGATGAAAAAAAAAAAAAAAAAAA------ 1253
consensus_11103#2      CAGAACA-AAATAATTTCCCTCGGGGGGGGGCCCGGGACCCAATCCGCCCTATATGAGTC 739
consensus_11103#1      GTGATGGTAAATAAAAAAAAAAAAGAGAAAAAACCGGAGGGGGGGCCCGGTTCCCATGCG 751
                               * ****            *          *                      

consensus_11103#0      ------------------------------------------------------------
consensus_11103#2      GTATAACCCCCGCCCATTGGCCGTGTTGAAA----------------------------- 770
consensus_11103#1      AGCCTAACGAGATGGGAGCCCCCCCTCCTGACCGGTGTAACACGGAGAGTGGAAACCCTG 811
                                                                                   

consensus_11103#0      ------------------------------------------------------------
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      GATGCCGCCTTACCGGTGAACTCCCTTTGTGCCTCGCTTCTTCTCAACCTCGCCGCCCGG 871
                                                                                   

consensus_11103#0      ------------------------------------------------------------
consensus_11103#2      ------------------------------------------------------------
consensus_11103#1      AGTAGGGCCACGTGTCCTATCGACGCCGCCGCCAGCGGGCGGGGACCGACCTATGACGCT 931
                                                                                   

consensus_11103#0      ----------------------------------------------------------
consensus_11103#2      ----------------------------------------------------------
consensus_11103#1      GCGCCCTCCGTCCGGTTGTTGGTACGTGCGTCTGACCCGCACTATTAAGTCGCCCCCC 989
                                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)