cluster # 11112

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Oryza sativa
cluster # 11112 cluster # 11112 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11112#0 length = 2081 sequences # 3

consensus_11112#1 length = 1576 sequences # 5

consensusID : consensus_11112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2081
fasta sequence

                              [CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCCGTCTCCGCCGCGCCCGACCCGGACCTCACCAACTTCCGCTCCCTCTTCTCCCGGGTGCTCAACACCTACCCGGACCCGCCGCTGGAGGCCGTCTGGTTCTTCTCCGCGCTCTCCTTCCACGACAACCCCGGCGACCTCCGCAGCCTCCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCCCGCTCCGCCGCCAAGCCGCTCGCCCTCCTCGCCCCCGTCGTCTCCGAGCTCTACCACTCCGCCAAGCCCCGGAGGGAGGCCGAGGCCCTGGTCGAGGCCGTCCTCAGCTACATCAGCATCTGCAGCAGCCGCGCCGCCCCCGCCGCCGGCGATGGCGCCGGCGCCGGCGCCGACGCCGGGAGCCTGCTACCGGCCTTCGGCGAGCTGGTGAAGGTGTGGAGCGTGCGCCACTCGAGGGACAGGTGCCCGTTCCAGGTGCTCTTCCCTCTTGTCGGGGAGGACGCCAGGCGGGAGCTCATGAGGGAAGGCTGCAGCGTCGCCTTCCTCGCCGGGGCGGTGGTTGCCGAGGCGTTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGCGCGGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCTTCTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTCCAGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCA]

[+] EMBL AK102895             [CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCCGTCTCCGCCGCGCCCGACCCGGACCTCACCAACTTCCGCTCCCTCTTCTCCCGGGTGCTCAACACCTACCCGGACCCGCCGCTGGAGGCCGTCTGGTTCTTCTCCGCGCTCTCCTTCCACGACAACCCCGGCGACCTCCGCAGCCTCCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCCCGCTCCGCCGCCAAGCCGCTCGCCCTCCTCGCCCCCGTCGTCTCCGAGCTCTACCACTCCGCCAAGCCCCGGAGGGAGGCCGAGGCCCTGGTCGAGGCCGTCCTCAGCTACATCAGCATCTGCAGCAGCCGCGCCGCCCCCGCCGCCGGCGATGGCGCCGGCGCCGGCGCCGACGCCGGGAGCCTGCTACCGGCCTTCGGCGAGCTGGTGAAGGTGTGGAGCGTGCGCCACTCGAGGGACAGGTGCCCGTTCCAGGTGCTCTTCCCTCTTGTCGGGGAGGACGCCAGGCGGGAGCTCATGAGGGAAGGCTGCAGCGTCGCCTTCCTCGCCGGGGCGGTGGTTGCCGAGGCGTTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGCGCGGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCTTCTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTCCAGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCA]
[+] EMBL AK067562             [ CCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCCGTCTCCGCCGCGCCCGACCCGGACCTCACCAACTTCCGCTCCCTCTTCTCCCGGGTGCTCAACACCTACCCGGACCCGCCGCTGGAGGCCGTCTGGTTCTTCTCCGCGCTCTCCTTCCACGACAACCCCGGCGACCTCCGCAGCCTCCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCCCGCTCCGCCGCCAAGCCGCTCGCCCTCCTCGCCCCCGTCGTCTCCGAGCTCTACCACTCCGCCAAGCCCCGGAGGGAGGCCGAGGCCCTGGTCGAGGCCGTCCTCAGCTACATCAGCATCTGCAGCAGCCGCGCCGCCCCCGCCGCCGGCGATGGCGCCGGCGCCGGCGCCGACGCCGGGAGCCTGCTACCGGCCTTCGGCGAGCTGGTGAAGGTGTGGAGCGTGCGCCACTCGAGGGACAGGTGCCCGTTCCAGGTGCTCTTCCCTCTTGTCGGGGAGGACGCCAGGCGGGAGCTCATGAGGGAAGGCTGCAGCGTCGCCTTCCTCGCCGGGGCGGTGGTTGCCGAGGCGTTCCTGCTCAGGCTCTGCCTCAAGGTGCAGGGCGCGGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCTTCTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTCCAGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACAT                         ]
[+] EMBL AU100991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGGATGACTCACTCAGATGCTG CCTTTTCTTCATTGACAAGCAGANCGGTGGGAAGGTTATGGACNCAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCAaaaaa                            ]




>consensus_11112#0
CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCT
AGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCT
CCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCC
TGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCC
GTCTCCGCCGCGCCCGACCCGGACCTCACCAACTTCCGCTCCCTCTTCTCCCGGGTGCTC
AACACCTACCCGGACCCGCCGCTGGAGGCCGTCTGGTTCTTCTCCGCGCTCTCCTTCCAC
GACAACCCCGGCGACCTCCGCAGCCTCCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCC
CGCTCCGCCGCCAAGCCGCTCGCCCTCCTCGCCCCCGTCGTCTCCGAGCTCTACCACTCC
GCCAAGCCCCGGAGGGAGGCCGAGGCCCTGGTCGAGGCCGTCCTCAGCTACATCAGCATC
TGCAGCAGCCGCGCCGCCCCCGCCGCCGGCGATGGCGCCGGCGCCGGCGCCGACGCCGGG
AGCCTGCTACCGGCCTTCGGCGAGCTGGTGAAGGTGTGGAGCGTGCGCCACTCGAGGGAC
AGGTGCCCGTTCCAGGTGCTCTTCCCTCTTGTCGGGGAGGACGCCAGGCGGGAGCTCATG
AGGGAAGGCTGCAGCGTCGCCTTCCTCGCCGGGGCGGTGGTTGCCGAGGCGTTCCTGCTC
AGGCTCTGCCTCAAGGTGCAGGGCGCGGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAG
CTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTT
CTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGAT
GAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATT
AACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGA
TTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCG
ATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCT
ACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCTT
CTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTCC
AGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACT
CACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACA
AGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCT
GCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCT
GAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGAT
TACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTCT
GATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTAC
TTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCT
TCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAAT
AATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGC
TAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAAT
AGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATG
TTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCA

consensusID : consensus_11112#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1576
fasta sequence

                              [CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTC-TTCTCAAGTGGCTTGTA-GATCTGGAAGATAAGGGCTTCAAAGTA-TTTGGAGAGAATGTTTCCA-GGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTT-GTCGGCAAAT-AATGGTATGAGC-AGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTCAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCATTTGTGTAGCTGTTACGATTAGTGTTTCTACATTGCAACATTGGCATGTTCTGTGTAGAGTTGCT]

[+] EMBL AK101694             [CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTC TTCTCAAGTGGCTTGTA GATCTGGAAGATAAGGGCTTCAAAGTA TTTGGAGAGAATGTTTCCA GGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTT GTCGGCAAAT AATGGTATGAGC AGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCATTTGTGTAGCTGTTACGATTAGTGTTTCTACATTGCAACATTGGCATGTTCTGTGTAGAGTTGCT]
[+] EMBL C28777               [                                                                                                                                                                                                                                                                                                                                                     GCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGACGCCAGGNGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCAAACATNCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCTTTCTCAAGTGGCTTGTAGGATCTNGAAGATAAGGGNTTCAAAGTATTTTGGAGAGAATGTTTCCANGGGTAAGGGAGAGGCTGATGTATGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AU225887             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aGCAAATGTGGT AAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGCATTACTTCTTAGTCGGCAAATAAATGGTATGAGCAAGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAG AACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCCACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTCAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACagcggc                                                                                           ]
[+] EMBL CA763813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCCTCCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTCAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTAT                                                                                                           ]
[-] EMBL CA305709             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTTGGNACGATTGCTGTTGCTTGAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTACCTGCTTAGCTANCTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAATAGAGACTTCAAAATGTAGATCTACTTTAAAGGCTTCTGTAAGA                                                                                                                           ]




>consensus_11112#1
CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCT
AGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCT
CCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCC
TGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCA
GGCGCGTCACGCGCCGAGCTGCAGAAGGAGCTCAGGATCTGGGCAGTGAGCTCCATCTCG
GTCTTCCAGAACCAGCAATTCTTCGGGGTTCTGCTGAACATGCTCGTGAATCCTCCGCTA
CCTGTTTATTCACTACTGAGTGCTGATGATGAAATCTTGGTGAGAGATGTCCTTTATGAT
GCTCTGATTTTGGTGGATTATTCTTTCATTAACAAAGGAGCAGGAGTTGATCAAGCTGAT
AGCTCCCTTTTGCCCCTTTATGTGTCAAGATTGCTTATCACTCATGATGCCATCAATGAC
GCCAGGAGCAAAGGTGATCAAGGAAGGGCGATGTCTTTCATGAATGCCTTCTTCACTTCA
AACATCCCCACTTATTTTGCCAAGTGCGCTACTAGTCAAGTTGGCTTCAACCAACTCAGC
AAACCAGCTGCTATCACACCTCAAGCTCTTCTCAAGTGGCTTGTAGATCTGGAAGATAAG
GGCTTCAAAGTATTTGGAGAGAATGTTTCCAGGATTAGGGAGAGGCTGATGTATGACGAG
GTCAAGAATGGTTACCAGAGCAGGATGACTCACTCAGATGCTGACCTTTTCTTCATTGAC
AAGCAGAGCGGTGGGGAGGTTATGGACACAAGAGCTGGTGAGGATGAAGAAGCTGTTGAG
ATGGAAACAGCAGACAATGCTTTTATGGCTGCTGCTCAGTCTATGAAGGCGATGGCTAAT
GGCATGAGGAAAAGGAAGGATTGCGGGGCTGAAGACGCAAATGTGGTCAAGTTTGTGAAG
TACAAGGTTGAAGACAGCTCAGTGAAGGATTACTTCTTGTCGGCAAATAATGGTATGAGC
AGTGGTAGTGAGGTAGAGAATCCACAGTCTGATGATGAGATGGAAGAAACTGATTGATGG
ATAGAGAGGAAACCATCCGCTAATGCTTACTTGGGAGAGTCTTTTGGCGAGTCTGGAGTT
GGGACGATTGCTGTTGCTTCAGGTTCCCCTTCTGTAGGATGTCATGCAGCTTCTGTCTGG
ATGATGAATGAAGCGGGATTCTAGGATAATAATCTGCAACGCAGAGCCCGACCCCAGCCA
GGCTTACCGATATAGTAGTAACTGCTTAGCTAACTTAGACTCGATGCATGATGCTACAAA
CTATATATCATGTTCTCTTCTATATGCAATAGAGACTTCAAAATGTAGATCTACTTTAAA
GACTTCTGTAAGAGAAGAGTACCTTTTATGTTATCCCACGGAACATCTTTTAAGTTAGTG
AAATCTTAGCATTTGTGTAGCTGTTACGATTAGTGTTTCTACATTGCAACATTGGCATGT
TCTGTGTAGAGTTGCT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11112#0      CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCCCCTCACTCTGCTCCCCTCGAAACCT 60
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGCTTCCGAATCCACCCGCCTCCGCCT 120
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      CCCCCTCCCGCCATGGCCGCCGGCTCCATCGTGGTGGACTTCCCCTCCATGGGCGCCGCC 180
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      TGCTGCTTCTCCAGCCTCGAGTCCCTCCTCCGCGACTCCACCTCCCGCTTCCTCGCCGCC 240
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GTCTCCGCCGCGCCCGACCCGGACCTCACCAACTTCCGCTCCCTCTTCTCCCGGGTGCTC 300
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      AACACCTACCCGGACCCGCCGCTGGAGGCCGTCTGGTTCTTCTCCGCGCTCTCCTTCCAC 360
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GACAACCCCGGCGACCTCCGCAGCCTCCTCCACCTCCTCTCCGCCTTCACCGCCTCCTCC 420
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      CGCTCCGCCGCCAAGCCGCTCGCCCTCCTCGCCCCCGTCGTCTCCGAGCTCTACCACTCC 480
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      GCCAAGCCCCGGAGGGAGGCCGAGGCCCTGGTCGAGGCCGTCCTCAGCTACATCAGCATC 540
consensus_11112#1      ------------------------------------------------------------
                                                                                   

consensus_11112#0      TGCAGCAGCCGCGCCGCCCCCGCCGCCGGCGATGGCGCCGGCGCCGGCGCCGACGCCGGG 600
consensus_11112#1      ----------------CCCCCATTCCCCAACCAAACCCCTTCCCCTTCTCC-----CCTC 39
                                       *****    **        * **  * **  * **     *   

consensus_11112#0      AGCCTGCTACCGGCCTTCGGCGAGCTGGTGAAGGTGTGGAGCGTGCGCCACTCGAGGGAC 660
consensus_11112#1      ACTCTGCTCC---CCTCGAAACCTAGGGTTAGGGTTTCGGCCCCCCTCCTCCCCACCGGC 96
                       *  ***** *   ***          *** * *** * *  *   * ** * * *  * *

consensus_11112#0      AGGTGCCCGTTCCAGGTGCTCTTCCCTCTTGTCGGGGAGGACGCCAGGCGGGAGCTCATG 720
consensus_11112#1      TTCCGAATCCACCCGCCTCCGCCTCCCCCTCCCGCCATGGCCGCCGGCTCCA---TCGTG 153
                           *      ** *   *     ** * *  **    ** **** *        ** **

consensus_11112#0      AGGGAAGGCTGCAGCGTCGCCTTC-CTCGCCGGGGCGGTGGTTGCCGAGGCGTTCCTGCT 779
consensus_11112#1      GTGGACTTCCCCTCCATGGGCGCCGCCTGCTGCTTCTCCAGCC-TCGAGTCCCTCCTCCG 212
                         ***   *  *  * * * *  * *  ** *   *    *    **** *  **** * 

consensus_11112#0      CAGGCTCTGCCTCAAGGTGCAGGGCGCGGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGA 839
consensus_11112#1      C-GACTCCACCTCCCGCTTCC--TCGCCGCAGGCGCGTCACGCGCCGAGCTGCAGAAGGA 269
                       * * ***  ****  * * *    *** ********************************

consensus_11112#0      GCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGT 899
consensus_11112#1      GCTCAGGATCTGGGCAGTGAGCTCCATCTCGGTCTTCCAGAACCAGCAATTCTTCGGGGT 329
                       ************************************************************

consensus_11112#0      TCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGA 959
consensus_11112#1      TCTGCTGAACATGCTCGTGAATCCTCCGCTACCTGTTTATTCACTACTGAGTGCTGATGA 389
                       ************************************************************

consensus_11112#0      TGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCAT 1019
consensus_11112#1      TGAAATCTTGGTGAGAGATGTCCTTTATGATGCTCTGATTTTGGTGGATTATTCTTTCAT 449
                       ************************************************************

consensus_11112#0      TAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAG 1079
consensus_11112#1      TAACAAAGGAGCAGGAGTTGATCAAGCTGATAGCTCCCTTTTGCCCCTTTATGTGTCAAG 509
                       ************************************************************

consensus_11112#0      ATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGC 1139
consensus_11112#1      ATTGCTTATCACTCATGATGCCATCAATGACGCCAGGAGCAAAGGTGATCAAGGAAGGGC 569
                       ************************************************************

consensus_11112#0      GATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGC 1199
consensus_11112#1      GATGTCTTTCATGAATGCCTTCTTCACTTCAAACATCCCCACTTATTTTGCCAAGTGCGC 629
                       ************************************************************

consensus_11112#0      TACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCT 1259
consensus_11112#1      TACTAGTCAAGTTGGCTTCAACCAACTCAGCAAACCAGCTGCTATCACACCTCAAGCTCT 689
                       ************************************************************

consensus_11112#0      TCTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTC 1319
consensus_11112#1      TCTCAAGTGGCTTGTAGATCTGGAAGATAAGGGCTTCAAAGTATTTGGAGAGAATGTTTC 749
                       ************************************************************

consensus_11112#0      CAGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGAC 1379
consensus_11112#1      CAGGATTAGGGAGAGGCTGATGTATGACGAGGTCAAGAATGGTTACCAGAGCAGGATGAC 809
                       ************************************************************

consensus_11112#0      TCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACAC 1439
consensus_11112#1      TCACTCAGATGCTGACCTTTTCTTCATTGACAAGCAGAGCGGTGGGGAGGTTATGGACAC 869
                       ************************************************************

consensus_11112#0      AAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGC 1499
consensus_11112#1      AAGAGCTGGTGAGGATGAAGAAGCTGTTGAGATGGAAACAGCAGACAATGCTTTTATGGC 929
                       ************************************************************

consensus_11112#0      TGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGC 1559
consensus_11112#1      TGCTGCTCAGTCTATGAAGGCGATGGCTAATGGCATGAGGAAAAGGAAGGATTGCGGGGC 989
                       ************************************************************

consensus_11112#0      TGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGA 1619
consensus_11112#1      TGAAGACGCAAATGTGGTCAAGTTTGTGAAGTACAAGGTTGAAGACAGCTCAGTGAAGGA 1049
                       ************************************************************

consensus_11112#0      TTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTC 1679
consensus_11112#1      TTACTTCTTGTCGGCAAATAATGGTATGAGCAGTGGTAGTGAGGTAGAGAATCCACAGTC 1109
                       ************************************************************

consensus_11112#0      TGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTA 1739
consensus_11112#1      TGATGATGAGATGGAAGAAACTGATTGATGGATAGAGAGGAAACCATCCGCTAATGCTTA 1169
                       ************************************************************

consensus_11112#0      CTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCC 1799
consensus_11112#1      CTTGGGAGAGTCTTTTGGCGAGTCTGGAGTTGGGACGATTGCTGTTGCTTCAGGTTCCCC 1229
                       ************************************************************

consensus_11112#0      TTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAA 1859
consensus_11112#1      TTCTGTAGGATGTCATGCAGCTTCTGTCTGGATGATGAATGAAGCGGGATTCTAGGATAA 1289
                       ************************************************************

consensus_11112#0      TAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAG 1919
consensus_11112#1      TAATCTGCAACGCAGAGCCCGACCCCAGCCAGGCTTACCGATATAGTAGTAACTGCTTAG 1349
                       ************************************************************

consensus_11112#0      CTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAA 1979
consensus_11112#1      CTAACTTAGACTCGATGCATGATGCTACAAACTATATATCATGTTCTCTTCTATATGCAA 1409
                       ************************************************************

consensus_11112#0      TAGAGACTTTAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTAT 2039
consensus_11112#1      TAGAGACTTCAAAATGTAGATCTACTTTAAAGACTTCTGTAAGAGAAGAGTACCTTTTAT 1469
                       ********* **************************************************

consensus_11112#0      GTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCA------------------ 2081
consensus_11112#1      GTTATCCCACGGAACATCTTTTAAGTTAGTGAAATCTTAGCATTTGTGTAGCTGTTACGA 1529
                       ******************************************                  

consensus_11112#0      -----------------------------------------------
consensus_11112#1      TTAGTGTTTCTACATTGCAACATTGGCATGTTCTGTGTAGAGTTGCT 1576