These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11115#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1301 fasta sequence [TACCTGTCCTGTCCGTCCACCTTGCTGTGTTAAATGCGTTTCTAGCGTAGCGTAGCAGATCCAACAAACACCTAGCAGCAGCAGCATTGGTACGTACTCCTCCTAGTCCTAGCTAGTGAGTGAGCGTGAGGAGCAGTGAGCATGGCGTCGCCACAGCTACAGCTGCAGGTACTAGCGCTGCTGCTGCTGCTCGCCACCACGGCCACGGCCACGGCGACGCCGA-CGCCGACGCTGATATTCCTTTTGGGCGGGCAGTCCAACATGGGCGGTCGCGGCGGCGCCACCAACGGGCCGTGGGACGGCGTGGTGCCGCCGGAGTGCGCCCCGTCACCTCGCATCCTCCGGTTGTCCCCTGAGCTCCGGTGGGAGGAAGCGCGGGAGCCCCTCCACGCCGGCATCGACGTCCACAACGTGCTCGGCGTGGGCCCGGGGATGTCCTTCGCCCACGCCCTCTTCCGCGCCATCCCGCCCTCCACCGTCATCGGCCTCGTCCCCTGCGCCCAGGGAGGCACGCCCATCGCCAACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGGCAGGGCGGCCATGGCCACCGCCGGTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGGCGGGAGGACGCGGAGGTGTACGCCCGGAAGATGGAGGGCATGGTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGT-CAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGTACTGATTCATTCCTCCCCTTCCCCTCTATGCAAAATCTGTCATATGGAGCGCGTGCTGTATGTAGGGGATGAGTATCTTACCACTTCTTCCTTCATTCCGGATTAAAATATAATGTTACTGATTTTCTTTTTCCCACAATTATTACTCCACTACTTTGGTTATTACACACACACAGGACAGACACCTGGATTGATTTCTGGACTAATGCTTCTTTCTTCCTACTTACATTACTATACTCTCCTAGTACTCCTGAAATGTGTACTGTCGGCAGCTCCAATTGTACTCATGAAGGGATGATCTGTTATGTAATGTAGTATGCACCCA] [+] EMBL AK061073 [TACCTGTCCTGTCCGTCCACCTTGCTGTGTTAAATGCGTTTCTAGCGTAGCGTAGCAGATCCAACAAACACCTAGCAGCAGCAGCATTGGTACGTACTCCTCCTAGTCCTAGCTAGTGAGTGAGCGTGAGGAGCAGTGAGCATGGCGTCGCCACAGCTACAGCTGCAGGTACTAGCGCTGCTGCTGCTGCTCGCCACCACGGCCACGGCCACGGCGACGCCGA CGCCGACGCTGATATTCCTTTTGGGCGGGCAGTCCAACATGGGCGGTCGCGGCGGCGCCACCAACGGGCCGTGGGACGGCGTGGTGCCGCCGGAGTGCGCCCCGTCACCTCGCATCCTCCGGTTGTCCCCTGAGCTCCGGTGGGAGGAAGCGCGGGAGCCCCTCCACGCCGGCATCGACGTCCACAACGTGCTCGGCGTGGGCCCGGGGATGTCCTTCGCCCACGCCCTCTTCCGCGCCATCCCGCCCTCCACCGTCATCGGCCTCGTCCCCTGCGCCCAGGGAGGCACGCCCATCGCCAACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGGCAGGGCGGCCATGGCCACCGCCGGTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGGCGGGAGGACGCGGAGGTGTACGCCCGGAAGATGGAGGGCATGGTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGT CAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGTACTGATTCATTCCTCCCCTTCCCCTCTATGCAAAATCTGTCATATGGAGCGCGTGCTGTATGTAGGGGATGAGTATCTTACCACTTCTTCCTTCATTCCGGATTAAAATAT ] [+] EMBL AK100733 [ ACCTGTCCTGTCCGTCCACCTTGCTGTGTTAAATGCGTTTCTAGCGTAGCGTAGCAGATCCAACAAACACCTAGCAGCAGCAGCATTGGTACGTACTCCTCCTAGTCCTAGCTAGTGAGTGAGCGTGAGGAGCAGTGAGCATGGCGTCGCCACAGCTACAGCTGCAGGTACTAGCGCTGCTGCTGCTGCTCGCCACCACGGCCACGGCCACGGCGACGCCGA CGCCGACGCTGATATTCCTTTTGGGCGGGCAGTCCAACATGGGCGGTCGCGGCGGCGCCACCAACGGGCCGTGGGACGGCGTGGTGCCGCCGGAGTGCGCCCCGTCACCTCGCATCCTCCGGTTGTCCCCTGAGCTCCGGTGGGAGGAAGCGCGGGAGCCCCTCCACGCCGGCATCGACGTCCACAACGTGCTCGGCGTGGGCCCGGGGATGTCCTTCGCCCACGCCCTCTTCCGCGCCATCCCGCCCTCCACCGTCATCGGCCTCGTCCCCTGCGCCCAGGGAGGCACGCCCATCGCCAACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGGCAGGGCGGCCATGGCCACCGCCGGTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGGCGGGAGGACGCGGAGGTGTACGCCCGGAAGATGGAGGGCATGGTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGT CAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGTACTGATTCATTCCTCACCTTCCCCTCTATGCAAAATCTGTCATATGGAGCGCGTGCTGTATGTAGGGGATGAGTATCTTACCACTTCTTCCTTCATTCCGGATTAAAATATAATGTTACTGATTT ] [+] EMBL OSS13122A [ CCACCTTNCTGTGTTAAATNCGTTTCTAGCGTAGNAT GCAGATCCAACAAACACCTAGCAGCAGCAGCATTGGTACGTACTCCTCCTAGTCCTAGCTAGTGAGTGAGCGTGAGGAGCAGTGAGCATGGCGTCG CACAGCTACAGCTGCAGGTACTAGCGCTGCTGCTGCTGCTCGTCACCACGNCCACGGCCACGGCGACG CGACCGTCGACGCTGATATTCCTTTTGGGCGGGCAGTCCAACATGGGCGGTCNCGGC GNGGCACCAACGGNCCGTGGGACGCCGTGGTG ] [+] EMBL CB666313 [ AGCAGCAGCAGCATTGGTACGTACTCCTCCTAGTCCTAGCTAGTGAGTGAGCGTGAGGAGCAGTGAGCATGGCGTCGCCACAGCTACAGCTGCAGGTACTAGCGCTGCTGCTGCTGCTCGCCACCACGGCCACGGCCACGGCGACGCCGA CGCCGACGCTGATATTCCTTTTGGGCGGGCAGTCCAACATGGGCGGTCGCGGCGGCGCCACCAACGGGCCGTGGGACGGCGTGGTGCCGCCGGAGTGCGCCCCGTCACCTCGCATCCTCCGGTTGTCCCCTGAGCTCCGGTGGGAGGAAGCGCGGGAGCCCCTCCACGCCGGCATCGACGTCCACAACGTGCTCGGCGTGGGCCCGGGGATGTCCTTCGCCCACGCCCTCTTCCGCGCCATCCCGCCCTCCACCGTCATCGGCCTCGTCCCCTGCGCCCAGGGAGGCACGCCCATCGCCAACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGGCAGGGCGGCCATGGCCACCGCCGGTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGGCGGGAGGACGCGGAGGTGTACGCCCGGAAGATGGAGGGCATGGTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGT CAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACC ] [-] EMBL CB666314 [ AGGGAGGCACGCCCATCGCCAACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGGCAGGGCGGCCATGGCCACCGCCGGTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGGCGGGAGGACGCGGAGGTGTACGCCCGGAAGATGGAGGGCATGGTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGT CAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGTACTGATTCATTCCTCCCCTTCCCCTCTATGCAAAATCTGTCATATGGAGCGCGTGCTGTATGTAGGGGATGAGTATCTTACCACTTCTTCCTTCATTCCGGATTAAAATATAATGTTACTGATTTTCTTTTTCCCACAATTATTACTCCACTACTTTGGTTATTACACACACACAGGACAGACACCTGGATTGATTTCTGGACTAATGCTTCTTTCTTCCTACTTACATTACTATACTCTCCTAGTACTCCTGAAATGTGTACTGTCGGCAGCTCCAATTGTACTCATGAAGGGATGATCTGTTATGTAATGTAGTATGCACCCA] [+] EMBL OSS4183A [ AACTGGACCAGGGGCACGGAGCTGTACGAGCGGATGGTGGGGCGCGNCAGGGCGGCCATGGCCACCGCCGNTGCAGGTGCAGGGGCCAGGATGGGGGCGCTGCTGTGGTACCAGGGGGAGGCGGACACCATCCGNCGGGAGGACGCGGAGGTGTACGCCCGNAAGATGGAGGGCATGNTGCGCGACGTCCGGCGAGACCTGGCGTTGCCGNAGCTGCTGGTGATCCAGGTGGG ] [+] EMBL AU032661 [ anGTCCGGCGAGACCTGGCGTTGCCGGAGCTGCTGGTGATCCAGGTGGGGATCGCGACGGGGCAGGGCAAGTTCGTCGAGCCCGTCCAGGGAGGCCCAGAAGGCGGTCAGGCTTCCTTTTCTCAAGTACGTCGACGCCAAGGGCCTCCCCATCGCCAACGACTACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGTACTGATTCATTCCTCCCCTTCCNNTCTATGCAAAATCTGTCATATGGAGCGCGTGCTGTATGTAGGGGATGAGTATCTTACCACTTCTTCCTTCATTCCGGATTAAAATATAATGTTACTGATTTTCTTTTTCCAAAAAaaaa ] [+] EMBL CB000811 [ ACACGCACCTCACCACCCCGGCGCAGGTCAAGCTCGGCAAATTGCTAGCCAAGGCCTACCTATCCACGCTCTAATTATATCATTTGCGTTCACTGCTGGCTACTAAGCACTGATTCATTCCTCCCC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||