cluster # 11119

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Oryza sativa
cluster # 11119 cluster # 11119 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11119#0 length = 1173 sequences # 8
consensusID : consensus_11119#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1173
fasta sequence
                              [CGCGGCTCTCCTTCTTCTTCTTCAATCTTCGCCCTCCTCCTCCTCCTCGTACGCGCCCACGCGGTTCTCTTTCTGCCCCCTCGATCGATTTGAGCAGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGT-CGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCT-GGGTAATATGCTAGAAGCGGATAGGCAGAGTAAT-GGGAAGGCATGCATACTAACTGACACCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCT-CTCCGGCAAGAAAACAGCACCCTCCAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCGCTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG-CAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCAT-CAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAACCAATCAGAAACTCACTTTGAGCCTAGAGGATATACTACTGAATGATGTGCATGTAAATATTTC-AATCTCCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGAACCCGTTTTATCCCCTTGCAAAAAAAAAAAAAA]

[+] EMBL C27398               [CGCGGCTCTCCTTCTTCTTCTTCAATCTTCGCCCTCCTCCTCCTCCTCGTACGCGCCCACGNTNTNCTCTTTCTGCCCCCTCGATCGATTTGAGCAGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTG CGTNCGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCTNGGGTAATATGCTAGAAGCGGATAGGCAGAGTAATNGGGAAGGCATGCATACTAACTTACANCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCTNTTCCGGCAAG AAACAGCANCCTTCAGAAT AATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK068704             [                               CCCTCCTCCTCCTCCTCGTACGCGCCCACGCGGTTCTCTTTCTGCCCCCTCGATCGATTTGAGCAGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGT CGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCT GGGTAATATGCTAGAAGCGGATAGGCAGAGTAAT GGGAAGGCATGCATACTAACTGACACCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCT CTCCGGCAAGAAAACAGCACCCTCCAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCGCTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG CAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCAT CAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAACCAATCAGAAACTCACTTTGAGCCTAGAGGATATACTACTGAATGATGTGCATGTAAATATTTC AATCTCCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGAACCCGTT                          ]
[+] EMBL CF310350             [                               CCCTCCTCCTCCTCCTCGTACGCGCCCACGCGGTTCTCTTTCTGCCCCCTCGATCGATTTG   AGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGT CGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACATGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCT GGGTAATATGCTAGAAGCGGATAGGCAGAGTAAT GGGAAGGCATGCATACTAACTGACACCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCT CTCCGGCAAGAAAACAGCACCCTCCAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCGCTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCGCCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG CAAGACAGCCACTGGAACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK061515             [                                CCTCCTCCTCCTCCTCGTACGCGCCCACGCGGTTCTCTTTCTGCCCCCTCGATCGATTTG   AGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGT CGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGCGAGCT GGGTAATATGCTAGAAGCGGATAGGCAGAGTAAT GGGAAGGCATGCATACTAACTGACACCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCT CTCCGGCAAGAAAACAGCACCCTCCAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAAAATGGTGCGCTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG CAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCAT CAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAACCAATCAGAAACTCACTTTGAGCCTAGAGGATATACTACTGAATGATGTGCATGTAAATATTTC AATCTCCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGAACCCGTTTT                        ]
[+] EMBL CA756579             [                                                      GCCCACGCGGTTCTCTTTCTGCCCCCTCGATCGATTTGAGCAGGGAACGGAAGGGGGAGGTTTTTGGAGGAGGCCATGGTGCCGT CGGAGAGGGGGGACGTCNCCACCGCCATCAGACCCGCCGCTGCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGGAAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BE039939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGACCTCCAAAACGAGCTGAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG CAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCAT CAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAACCAATCAGAAACTCACTTTGAGCTTAGAGGATATACTACTGAATGATGTGCATGTAAATAATTCAAATCTCCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGAACCCGCTTTATCCCCTTGCAAAAAAAAAAAAAA]
[-] EMBL CF310349             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAGGATGCGTGCGACAGGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCGCCTCTCCCCGTTCCTCCCTCTCCAGGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTG CAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCAT CAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCAAaaaaa                                                                                                                                    ]
[+] EMBL AU100816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CAATGCAGCCATCTCCCATGACAACAAGCACAGTGTTCCCCTTGCAGCAGCCACTNCCACAACCNACAGTCATTGAGCCCTCTGTCAAGACAGCCACTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCATCCAGAAGACCAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCTTGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCNAATGTAGTGGTAGCACGATAGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACACGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCTGAGTAGATCAGCTCCANCCAATCAGAAACTCACTTTGAGCCTAGAGGATATACTACTGAATGATGTGCATGTAAATATTTC AATCTCCCTTTTGTTTCaaaaa                                                  ]




>consensus_11119#0
CGCGGCTCTCCTTCTTCTTCTTCAATCTTCGCCCTCCTCCTCCTCCTCGTACGCGCCCAC
GCGGTTCTCTTTCTGCCCCCTCGATCGATTTGAGCAGGGAACGGAAGGGGGAGGTTTTTG
GAGGAGGCCATGGTGCCGTCGGAGAGGGGGGACGTCGCCACCGCCATCAGACCCGCCGCT
GCCGACAAGCTCGTCCATGGGCCTATCTCTGACAAGAAGTGCCGGAAGAAGGTCCCGAGG
AAGGTTCACAAATCTGAGAGGGAGAAGCTTAAACGCGGGCATCTCAATGATCTGTTCGGC
GAGCTGGGTAATATGCTAGAAGCGGATAGGCAGAGTAATGGGAAGGCATGCATACTAACT
GACACCACCCGGATCTTAAGAGATCTGCTTTCTCAAGTAAAATCTCTCCGGCAAGAAAAC
AGCACCCTCCAGAATGAATCTAATTATGTTACGATGGAAAGGAATGAGTTGCAGGATGAA
AATGGTGCGCTACGCAGCGAAATCTCTGACCTCCAAAACGAGCTGAGGATGCGTGCGACA
GGGAGTCCAGGTTGGGGCCATGGCGCGACTGGATCACCTCTCCCCGTTCCTCCCTCTCCA
GGCACGGTTTTCCCATCGCAGCAGCCAATGCAGCCATCTCCCATGACAACAAGCACAGTG
TTCCCCTTGCAGCAGCCACTGCCACAACCAACAGTCATTGAGCCCTCTGCAAGACAGCCA
CTGGAACTGAAGCTCTTCCTAGAAGCACCCCCCGCCGAAGACCCTGAACCATCAGAAGAC
CAGGAGGCTCCGAACAATGTGGCACGACCGCAGCCGAGGTACCCAACAGAGGCATCTTCT
TGGCCTATTAGCCTGGGACTTCCAAGAATGGAAGATGAGCAAATGTAGTGGTAGCACGAT
AGATGATAGCACAGGTAGAGATTGAGAGGGTCTGTTTTTAATGCATGCAGGAATTCCACA
CGAAAACACTTCTGTCCTTGCATGAAAACTGGAAAATTTCCTGCATTCCAAGTAAGACCT
GAGTAGATCAGCTCCAACCAATCAGAAACTCACTTTGAGCCTAGAGGATATACTACTGAA
TGATGTGCATGTAAATATTTCAATCTCCCTTTTGTTTCTGTAAACTCTAGTGAGAATAGA
ACCCGTTTTATCCCCTTGCAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case