These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11142#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2198 fasta sequence [GTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATA-GTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTTTACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATATCTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTAACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGTATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTGCATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCTGTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAGTGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGTGGGTTGATCACTGANNAAAAAAAAA] [+] EMBL AK102851 [GTTCGTTCCCTGCCTCACTGGTAGCGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATA GTGGATGTACATGCTGTCAAGGAAAAAACCAAGGTCCATTACAATCAAGTTTTACTCTGGGCATAACTATAAGATCCCGTCAAACCTCTTCTCTCTCAGTGATTTGGAATATCTGCAGATAAAAAGATGCATCATCGGTTTGCCTCAGGAGTTTGAAGGTTTCAAGCGGCTAACTGTCCTGAATCTGAAATATTTCTCCTCAACAGACAGTGACATAAATAATCTGATCTCCTCATGCCCCTTGCTGAGTACATTATGTTTGAAATATTTCGAGGGTATCACTTGTCTCAGTATTCAAGCTCCAGCACTGCAGGATTTAGAGGTTAAAGGGAACTTTCAAGATTTTCATCTGCATGCACCTAATCTGTCCAATTTAGATGTTTCACTTGACAAAACAGAAGCCCAACAATCTGTTGTAGTTGAAGGCAACAGGAAAAATTATCTGAAGCAAGCTATGGTCAGCCTAACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATTTGTATTGAGAAGTGCTTTTGGAACTGGACAGAGGTCTTGGGTGCTTGTTCAATATTTCAGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTA ] [+] EMBL CB639153 [ CGGCGCTTGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATCTGGCCCTTTTGCTCCACAATGGACCTCTTGCTTCCTTTTCAATTCTAGGGTTCAAAAGATACCATGATGTATTTGATAGGTGGATGT ] [+] EMBL AU173103 [ TGTCAAGCGCCGCCATTGCAGGACGAGCGAAGCCCTAAAGATCGACACCGTCACGGCGGCGGAAGGGGGAGGAGCGTCGTGGCGACCCGCTGCTCCCCGTGCCCGTCCGCTCCAACTCTCCAGAAACCCTAGATGTTCGACAATTGCGAGGTCACTATAATCGTCTCTGGAGCGATGCATCGTGCTAAAAAGGCAAAGGTGGAACCATCATCTGCGTTGAGGTCAGACAAATTCAGCAGCCTACCTCAAGAGATAAAGGTCACCATCCTCTCCAAGCTGAATTCCTTAGATGCTATTAGAGCCAGCATCCTATCCAGTGCTTGGAGGAATGTGTGGACTACTTTGCCAGAAATATATCTTTGTGATTTGTATCTCAGCTGGGGTTCCTCTGAAACGACACAACGCTCCAACTTTATTACGCTCGTCGATC ] [+] EMBL CF307372 [ AACTAGCATAGTAAGACTTGTTATGAAAAGATGCATCATTGCCTTGCCTCAGGAGTTTGAAGGTTTCAAGCAGCTATTTGTCTTGAATCTGAAATATTTCTCCTCAACAGACCATGATATAAATACTCTGGTCTCCTCATGCCCTTGGTTGAATACATTGCGTTTGAAACATTTCGATGGTATCAGTTGTCTCCGTATTGAAGGCCAGGTACTGCAGATTGTAGAGGTTGAAGGGAAATTTGAGGACTTTCATCTGAATGCACCTAATCTGTCCCATGTGTATATTACACTCGACAAAACAGAAGCCCAACAGTCTGTGGCAGTTGTAGGTGACATGAAAAACTACATGAAGCAAGCTTTTGTCAGCCTAACTAGTATAGAAGAACTTACTATAAGTGGCTCATTCTTGACGTATCTATCCAAAGGGTGCTTGTCGATGCAACTCCCAGGTGTGTTTGATCATCTGAAGAAGATCTGTATTGAGAAGTGCTTTTGGAACTGG ] [-] EMBL CB639154 [ AGAATGCCCCTACTTTCAGAGAACTTGAGATATGGAGCTTCCCACGTCCAGAAGCTTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGTTCTGCTCAGAAT AAAGTTCTTGGct ] [+] EMBL AU173104 [ TTATAGGCGTAAGACAATATGGGATCAAGATCAGACGGAGATTGAAGAGCCTACCTTGCATCACCTCGTGACAGTGGCCATAAACGATTTCGTGGGGCTCAACTGCGAGGTTGCTCTTGTTGGACTGCTACTGAGCTGGTCACCTGCTTTAGAGGATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCAaaaaaaaa ] [+] EMBL CF330157 [ GATCTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATCTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATCTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTCTTGGTTGGAGAATTGCCATGTCTCTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGTGGGTTGATCACTGANNAAAAAAAA ] [-] EMBL CF330156 [ ATTTGAAGATATTCAGGGCCAAGAACGTTAACGATGAATACATGTGCATTTGCAAGGGTCTTACCAAGTTACTGGCTCTCCCGAGGGCGTCTAGCAAAGCCAAGATCACTGTCATTTGATTCATGTACATCCAGGTCATTCGGCTGCGTTTTTGCTTCATATCGACGTTTGCTTGTGGCAGAACTACTGCTGTTAGTCTGTGTCCTTGGATTTTGGGGGTTATGCGTTAAATTTAAATCTTAGTAGTCTGTTAATTCGCTCCATCTTCCCTTTGAACTAGACATGCTTTGCTCAGAATGAATGTTTTTGGTTGGAGAATTGCCATGTCTTTTCTGTTCGTTCAACAAACTAGAAGTCGGTCAGCAAGCTCCATTTACTTCAAATGTTTGCGACTTGATATTTCAAGATGAAAAATATAATACTAGT GGTTGATCCCTGAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||