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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2193 fasta sequence
[CCATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG-CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG-AAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGCAAATAATTGCTCAAGAATGGGGAAGCACCGGTGGTGTGGTGGTGAAATCAGGAATGAATTTACTCCGT]
[+] EMBL CB637821 [CCATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAAGATCAAAACATACGGCTCGGTGA ]
[+] EMBL AK067073 [ ATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAGAAAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGCAAATAATTGCTCAAGAATGGGGAAGCACCGGTGGTGTGGTGGTGAAATCAGGAATGAATTTACTCCGT]
[+] EMBL AK066812 [ TGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG AAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTT ]
[+] EMBL CB651407 [ AAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATG ]
[+] EMBL CB646837 [ TCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCCCCACCAAGCTCAAGCTCTATCCACCA ]
[-] EMBL CB651408 [ TGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATG ]
[-] EMBL CB637822 [ ATGTTGCAAACTCTTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGGCCCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCC ]
[-] EMBL CB646838 [ CTCTCCTCGGATGGACAGAATCGCGGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG AAAAAAAAATCTGACCCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGC ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||