These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11145#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2193 fasta sequence [CCATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG-CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG-AAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGCAAATAATTGCTCAAGAATGGGGAAGCACCGGTGGTGTGGTGGTGAAATCAGGAATGAATTTACTCCGT] [+] EMBL CB637821 [CCATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAAGATCAAAACATACGGCTCGGTGA ] [+] EMBL AK067073 [ ATTAGCAAGAGTGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAGAAAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGCAAATAATTGCTCAAGAATGGGGAAGCACCGGTGGTGTGGTGGTGAAATCAGGAATGAATTTACTCCGT] [+] EMBL AK066812 [ TGCCCAATCTATCTGTCTTCTCCATAAGAGAGCATCTCAGGTGTAGTTTTTAGTTTCTCTCTCTAAAAATGGGAGGCAACTGAGGAAGAAGGAAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG AAAAAAAAATCTGAACCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTT ] [+] EMBL CB651407 [ AAGAACACGGCCTTCATTTCATCCAATTGAGTCAAGAGAGGAAATCTGAATTTGGGGGCGGCCAAGAAATGGAGCAGTATGAGGTGCTGGAGCAGATTGGGAAGGGGTCATTTGGCTCTGCCCTCCTGGTGAGACACAAGGTTGAGAAGAAGAGGTATGTCTTGAAGAAGATCAGACTTGCCCGTCAGACCGACAGATGCCGCCGATCAGCACACCAAGAGATGGAGCTCATTGCAAAAGTAAGGAACCCTTACATTGTGGAATACAAAGATTCATGGGTGGAGAAGGGTTGTTATGTGTGCATCGTGATTGGTTACTGTGAAGGAGGAGACATGTCAGAAGCCATTAAGAAGGCCAACAGTAATTATTTCTCAGAAGAGAGACTTTGTATGTGGCTTGTGCAGCTCCTGATGGCACTTGATTACTTGCATGTCAACCATATCCTTCATCGTGATGTGAAGTGCTCAAATATATTTCTGACGAAGGATCAAAACATACGGCTCGGTGATTTTGGTTTGGCCAAAGTATTGACTTCTGACGATTTAACTTCATCAGTTGTGGGTACTCCCAGCTACATGTGCCCTGAACTTCTTGCTGACATTCCATATGGTTCCAAGTCTGACATATGGTCACTAGGCTGTTGCCTCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATG ] [+] EMBL CB646837 [ TCTATGAGATGACTGCTTTGAAGCCTGCATTTAAAGCATTTGATATGCAAACACTGATAAACAAGATAAGCAAGTCGGTTCTCGCTCCTCTACCGACCATCTACTCCGGTGCATTTAGGGGGCTCATCAAGAGCATGCTGCGAAAAAGTCCAGATCACAGACCAAGTGCTGCAGAATTGCTTAAGCACCCACACCTTCAGCCCTTTGTACTGGAACTCCAATTGAAGTCGAGTCCCGCTCGCAATCTTTTCCCGGATACAAATAAGGCTTCATGTTCTGATGATGAAAACAATTGGAAGGCTAAGTACAGCAAGAGCCATTCATTTAAAGTAGACAGGATTGTAAAAGTTGACAAAGTTGCTGCTAACAATGGCCATCCTAGTTCTACTGGAACTGCAAAAGATTACCAAGAATTGCTAAAACAACCAATGGATGAGTTGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCCCCACCAAGCTCAAGCTCTATCCACCA ] [-] EMBL CB651408 [ TGTTAGGACAATTAACCGAGAAAGTTGTTGATGAAGTGATACATGGAAATCATTCAAGAGTAACAAAATCTCCAGCTCCTACTCCAAGAAGGGCATCATCAACTCCTAGAATACGACTAGAACCTTCAAAGACATTTCATGCTAGAGCAGCTGAGACTCCACCATCCAAATGTTCACTGGAACGAGCAAGTCAACCTACAAGACGAGCATCAACCCCGGTGAACATGTTGCAAACTCCTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATG ] [-] EMBL CB637822 [ ATGTTGCAAACTCTTGAGAAACGGCAGGGCGCCGACATCCTCACCAGACTAAAATCACCCGACGTTTCAGTGAACTCTCCTCGAATCGACAGAATCGCCGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGGCCCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCC ] [-] EMBL CB646838 [ CTCTCCTCGGATGGACAGAATCGCGGAATTCCCGATACCATCATTTGATGATGAACAATTGCACCCCACAACCAAGCTCAAGCTCTATCCACCATCCATCACTGACCAATCGATCACCAAGGACAAGTGCACATTCCAGGTTCTCCGAAGCGACAGCAGCAAGAACCACACCGGAGACAGTTCTGATCCCAGCATTCTTGGCACTGACAGTAATCCACTCATCACGAGCTCATCGGATTGGATGAAGCAGAGGAGATTCGACACGACGTCGTACCGTCAGAGAGCCGAGGCACTGGAAGGATTGCTGGAGTTCAGTGCACAGCTGCTGCAGCAGGAGAGGTTTGAGGAGCTGGGGATCTTGCTGAAGCCATTTGGGCCAGGGAAGGCGTCTCCGAGAGAGACGG CCATATGGTTGTCAAAGAGCTTCAAAGGGACTGGATTGTGATTAATCAGAGTCCTGCAAATGCAAAAAAAAG AAAAAAAAATCTGACCCTAGAATAATTTTGTGTCTTTGATTAGATTCAGGCTGCTCTGTACAGTTTCAGTTTTGTGGTAATATCCTCTTTTCGTCTTTGATTTTCGCGAAATGTTTGAAACACTCCGTTGTTTGGCGAGAGAAGCTCCATTTTTGTGTATAGC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||