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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11160#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1785 fasta sequence
[GAGAGTCCCTCTCTCCCCTTCCACATTCCACCTCCCCATGTGATGTGAAGCCCTCCCCTGTCCCCTCCCTACCTCCATCTCTCTCTCCCTCTCTTGAACACTGAGCCTCTTTGCTTACATACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGG-GGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTCCATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTTGTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGNCAAACCTCATCTTTCAGATTCAGGTT-GGTTGTTTTGCTGCGTGTTAACAAAGTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGTGTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTTTTCTTCTTCTAATGTGTACTTAATGACAGTAATTTTGTTGACGTTTAACTTGGTGTAATTAATGTTTTGATAGAGTTCTGTCATTGTTTTTTCAGGGTGTTTGATTGTAACAATTTTTATGATGTATGTACTACGCGGTTAGTTATACTACATGT]
[+] EMBL OSS1872A [GAGAGTCCCTCTCTCCCCTTCCACATTCCACCTCCCCATGTGATGTGAAGCCCTCCCCTGTCCCCTCCCTACCTCCATCTCTCTCTCCCTCTCTTGAACACTGAGCCTCTTTGCTTACATACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGG GGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTNCTNCATTNCTTGGGTTCTGCAACTTTTCANTGGTCTTGGGAGGGTCCTGTGTGGCTTTGGGGTGGTGCc ]
[+] EMBL CB671103 [ TCCCTACCTCCATCTCTCTCTCCCTCTCTTAAACACTGAGCCTCTTTGCTTACATACAATTCAGAAGAGTACTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTAGGAGGGTCAACTGTGCTGCGCTCTTCCATCTTTCCGATCACCTCCTCCTCTGCTTCTTTGATTGATTTGCACTGGTTCAGCTGGGTGTGTGCTTCTCCTCCATTCCTTGGCTCCTGCAACTTT ]
[+] EMBL OSS10451A [ AGCCTCTTTGCTTACATACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGG GGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTCCATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTTGTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGNCAAACCTCATCTTTCAGATTCAGGTTGGGTTGTTTTGCTGCGTGTTAACAAAGT ]
[+] EMBL AK060197 [ ATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGG GGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTCCGTTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTTGTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTT GGTTGTTTTGCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGTGTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCCCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTTTTCTTCTTCTAATGTGTACTTAATGACAGTAATTTTGTTGACGTTTAACTTGGTGTAATTAATGTTTTGATAGAGTTCTGTCATTGTTTTTTCAGGGTGTTTGATTGTAACAATTTTTATGATGTATGTACTACGCGGTTAGTTATACTACATGT]
[-] EMBL CB671104 [ CCAAGGAGGACCTCGAGTCCGAGGACGACCGGAGCCGTTTCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCCCCGCTGCCGATGGACAAGTCCTTCAACCCTTTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCCCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCTCTCCGAGGAGGCCATGAGGGCGCGGAGGTCTCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACATTGTTCATCCAGTGTTCTAGAGTAGCTCTTTGCCGGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTCGGTTAATGGTCTTCAGATCATGCCAAATTGGATGGCTGGATGTACATAACATGAATATTATCAGCAGCCAAGAA ]
[+] EMBL AU097086 [ TGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTTTTCTTCTTCTAATGTGTACTTAAaaaaaa ]
consensusID : consensus_11160#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1401 fasta sequence
[TGCTTACATACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTTGCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGTGTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCCTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTT]
[+] EMBL AK060355 [TGCTTACATACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCACTCACTCGTCTTTTGGTTTCTTGGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTTGCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGTGTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGCGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCCTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTT]
consensusID : consensus_11160#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1361 fasta sequence
[GGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTCCATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTTGTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTTGCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGTAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGTGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTT]
[+] EMBL AK073953 [GGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCTCCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTCCATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTTGTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATACAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTTGCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAAGAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTTCTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAAGCTGTAGATAGAGTTAAAGATGAGAGCTCTACTACCTCTTCGTCTACAAGCGCCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCTGCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCCGCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGCGCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGAGGAGACCAAGTAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAGCCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCTGCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGTGTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGTGCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGCCGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCCCTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAATTTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCCTGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATGCCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGATCAATATATTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11160#0 GAGAGTCCCTCTCTCCCCTTCCACATTCCACCTCCCCATGTGATGTGAAGCCCTCCCCTG 60
consensus_11160#1 ------------------------------------------------------------
consensus_11160#2 ------------------------------------------------------------
consensus_11160#0 TCCCCTCCCTACCTCCATCTCTCTCTCCCTCTCTTGAACACTGAGCCTCTTTGCTTACAT 120
consensus_11160#1 ---------------------------------------------------TGCTTACAT 9
consensus_11160#2 ------------------------------------------------------------
consensus_11160#0 ACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCAC 180
consensus_11160#1 ACAATTCAGTAGTGTAGTAATTCACTGCAGCAGCTGCATTTGTTTTGGTGCTGCACTCAC 69
consensus_11160#2 ------------------------------------------------------------
consensus_11160#0 TCACTCGTCTTTTGGTTTCTTGGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCT 240
consensus_11160#1 TCACTCGTCTTTTGGTTTCTTGGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCT 129
consensus_11160#2 ---------------------GGGGGTCAACTGTGCTGTGCTCTTCCATCTTTCCTTTCT 39
***************************************
consensus_11160#0 CCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTC 300
consensus_11160#1 CCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGG--------------- 174
consensus_11160#2 CCTCCTCCTCTGCTTCTTTGATTGCTTTGCACTGTTTCAGCTGGGTGTGTGCTTCTCCTC 99
*********************************************
consensus_11160#0 CATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTT 360
consensus_11160#1 ------------------------------------------------------------
consensus_11160#2 CATTCCTTGGCTCCTGCAACTTTTCACTGTTCTTGGCAGGTTCCTGTGTTGCTTTGTGTT 159
consensus_11160#0 GTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATA 420
consensus_11160#1 -------------------------------------------ATCGGATCGGTACAATA 191
consensus_11160#2 GTTGCTCTTGTTCTTTCTGACTGTTCTCTTGTTCTTCCATAGGATCGGATCGGTACAATA 219
*****************
consensus_11160#0 CAGCCATTCCATCCATAAAGGTGGNCAAACCTCATCTTTCAGATTCAGGTTGGTTGTTTT 480
consensus_11160#1 CAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTT 251
consensus_11160#2 CAGCCATTCCATCCATAAAGGTGGCCAAACCTCATCTTTCAGATTCAGCTTGGTTGTTTT 279
************************ *********************** ***********
consensus_11160#0 GCTGCGTGTTAACAAAGTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAA 540
consensus_11160#1 GCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAA 311
consensus_11160#2 GCTGCGTGTGAGCAAGTTTTCTGAGCTTTTCTTTTGTGCAAGAAGCAAAGAACAAGACAA 339
********* * *** *******************************************
consensus_11160#0 GAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTT 600
consensus_11160#1 GAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTT 371
consensus_11160#2 GAATCTGGCTTGCTTGTTCTTTATCGTTAGAAGGAATCTCCGCTTGCTGCTGCTTCGTTT 399
************************************************************
consensus_11160#0 CTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAA 660
consensus_11160#1 CTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAA 431
consensus_11160#2 CTGCATCTGTTTCTGTTCTTCTAATGGTGAATGAATAATCCCTAGAGCGAGAGAGAGAAA 459
************************************************************
consensus_11160#0 GCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGT 720
consensus_11160#1 GCTGTAGATAGAGTTAAAGATGAGAGCTCTGAGCAGAGTCGGCGTCGGGTTGGCGGTGGT 491
consensus_11160#2 GCTGTAGATAGAGTTAAAGATGAGAGCTCT------------------------------ 489
******************************
consensus_11160#0 GTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCG 780
consensus_11160#1 GTCCGCGCTGCTACTGCTCGCGCTCGCCGCCGAGCTCTACTACCTCTTCGTCTACAAGCG 551
consensus_11160#2 --------------------------------------ACTACCTCTTCGTCTACAAGCG 511
**********************
consensus_11160#0 CCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCT 840
consensus_11160#1 CCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCT 611
consensus_11160#2 CCGCCGCTCCGCCGCCATCTCCGACGCCGCCTCCTCGCCCTCCTCTTCTTCTCGCGAGCT 571
************************************************************
consensus_11160#0 GCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCC 900
consensus_11160#1 GCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCC 671
consensus_11160#2 GCTCCAGCTTTTCTGCTTCAAGAAGCCGCCCGCGCTCGCCTCGACCTACGCGCAGGAGCC 631
************************************************************
consensus_11160#0 GCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGC 960
consensus_11160#1 GCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGC 731
consensus_11160#2 GCACGCCGGCGAGGCGGTGGTGGCCGTGGCCGTCGACGACGACGACGACACGGTGGAGGC 691
************************************************************
consensus_11160#0 GCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGA 1020
consensus_11160#1 GCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGA 791
consensus_11160#2 GCAGCTGATGCGGCTGGGCAGCCTCGTCGGCCCCACGCGGCTGCTCTTCACCATCAAGGA 751
************************************************************
consensus_11160#0 GGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAG 1080
consensus_11160#1 GGAGACCAAGGAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAG 851
consensus_11160#2 GGAGACCAAGTAGGACCTCGAGTCCGAGGACGGCCGGAGCCGGTGCGGGAGGAGCCGGAG 811
********** *************************************************
consensus_11160#0 CCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCT 1140
consensus_11160#1 CCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCT 911
consensus_11160#2 CCTCGCCGAGCTGCTGCATTCGTCGGAGACGCCGTTCATGACGCCGGCGTCATCGCCGCT 871
************************************************************
consensus_11160#0 GCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGT 1200
consensus_11160#1 GCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGT 971
consensus_11160#2 GCCGATGGACAAGTCCTTCAACCCTCTGTTCGAGCCCACGGTGGCGGCGGCCGTGACGGT 931
************************************************************
consensus_11160#0 GTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGC 1260
consensus_11160#1 GTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGC 1031
consensus_11160#2 GTCGCCGCCGCCCAAGTTTCAGTTCTTGAAGGACGCCGAGGAGAAGATGTATCGGCGGGT 991
***********************************************************
consensus_11160#0 GCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGC 1320
consensus_11160#1 GCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGC 1091
consensus_11160#2 GCTCGCCGAGGAGGCCATGAGGGCGCGGAGGTCGCCGCAGACGAGGTCACCGGCGGCGGC 1051
************************************************************
consensus_11160#0 CGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCC 1380
consensus_11160#1 CGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCC 1151
consensus_11160#2 CGGAGAGGAGGACGGCGGGTACATCACCATCATGGTGGGGAAGAACAACAAGGTCATCCC 1111
************************************************************
consensus_11160#0 CTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAAT 1440
consensus_11160#1 CTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAAT 1211
consensus_11160#2 CTTGCCGTCGCCTCCCAGCAATGGTGATGGTGATCTGCAGTAGTGAGTTCTTTGCAAAAT 1171
************************************************************
consensus_11160#0 TTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCC 1500
consensus_11160#1 TTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCCTTGCC 1271
consensus_11160#2 TTTAATTAAGAAGGCCTTAATTAACTTTGTTCATCCAGTGTTCTAGTGTAGCTCTTTGCC 1231
****************************************************** *****
consensus_11160#0 TGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATG 1560
consensus_11160#1 TGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATG 1331
consensus_11160#2 TGTAATTTTCTCTCTCTCTCTCTCTCTCTTTTCTTTTTGGTTTATGGTCTTCTGATCATG 1291
************************************************************
consensus_11160#0 CCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGAT 1620
consensus_11160#1 CCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGAT 1391
consensus_11160#2 CCAAATTGGATGGTTGGATGTACATAACATGAATATTATCAGCAGCCAAGAACTTCAGAT 1351
************************************************************
consensus_11160#0 CAATATATTTTTCTTCTTCTAATGTGTACTTAATGACAGTAATTTTGTTGACGTTTAACT 1680
consensus_11160#1 CAATATATTT-------------------------------------------------- 1401
consensus_11160#2 CAATATATTT-------------------------------------------------- 1361
**********
consensus_11160#0 TGGTGTAATTAATGTTTTGATAGAGTTCTGTCATTGTTTTTTCAGGGTGTTTGATTGTAA 1740
consensus_11160#1 ------------------------------------------------------------
consensus_11160#2 ------------------------------------------------------------
consensus_11160#0 CAATTTTTATGATGTATGTACTACGCGGTTAGTTATACTACATGT 1785
consensus_11160#1 ---------------------------------------------
consensus_11160#2 ---------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||