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Oryza sativa
cluster # 11163 cluster # 11163       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11163#0 length = 1724 sequences # 7  
consensus_11163#1 length = 426 sequences # 1  

consensusID : consensus_11163#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1724
fasta sequence
                              [TCCAAAGGCTATTCTGAACCGAAGTCCTCCCACACCAAAACTTCGAGGCCCCCGTCGCGGCACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT-GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTATTTTTTTCTGCAAATGTTTGCAAAGACTCGTGATGGAATCAAAATGTAGCAGGTTGTTCTTTCATCCTTTTCTTTTTGTGCAGCATGCGTATATTGGAAGGTGAACTTGTCTGGTGTGCAAATGCTGCACTTTCCTGCTTGGATACGCAGCCGCTAAAGCTTGGACATGACGGCTTACCTGAATCCTTTGTTTCGATCTACGCTTCCCTCTCGTTGATGACTGGTGATTTGTCGCATGGATCACTTGAAGCTGGTGCAGGAACAAACTGAGAATGACATGTGGCAGGCAAGCCCTGTGAATGCAAAAAAGAAAATGGTGACTAAGCAAGAAGATAATGCCAAGTTCAGATAAGCATTTGGTAGGGGATTGCAACAAGCTGGGTGAAGGTGGCGTTTCAAGTTTAGTCATCATCTGCACCCCACAAGGATATGGTGAGGAATGGTTTACCGATCAATTGGAAAGATTATGACCGTTCAACATCGACTCTTTTGGATAATTCTGCCTATATGGTATGCATGATAAAGCTCAACTAGAGGAGTAACACAAAAAATGCCATGCATATATTTATCAATCAGCATGACTGAACTTGAAGTTGAACTGCATATGGTTGGCCATGGTGTATGTTGAAATAGTAACACAGTGGT]

[+] EMBL AK100138             [TCCAAAGGCTATTCTGAACCGAAGTCCTCCCACACCAAAACTTCGAGGCCCCCGTCGCGGCACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTATTTTTTTCTGCAAATGTTTGCAAAGACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CF318087             [                                    AAAACTTCGAGGCCCCCGTCGCGGCACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGAT GGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK064613             [                                     AAACTTCGAGGCCCCCGTCGCGGCACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAGTGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTATTTTTTTCTGCAAATGTTTGCAAAGACTCGTGATGGAATCAAAATGTAGCAGGTTGTTCTTTCATCCTTTTCTTTTTGTGCAGCATGCGTATATTGGAAGGTGAACTTGTCTGGTGTGCAAATGCTGCACTTTCCTGCTTGGATACGCAGCCGCTAAAGCTTGGACATGACGGCTTACCTGAATCCTTTGTTTCGATCTACGCTTCCCTCTCGTTGATGACTGGTGATTTGTCGCATGGATCACTTGAAGCTGGTGCAGGAACAAACTGAGAATGACATGTGGCAGGCAAGCCCTGTGAATGCAAAAAAGAAAATGGTGACTAAGCAAGAAGATAATGCCAAGTTCAGATAAGCATTTGGTAGGGGATTGCAACAAGCTGGGTGAAGGTGGCGTTTCAAGTTTAGTCATCATCTGCACCCCACAAGGATATGGTGAGGAATGGTTTACCGATCAATTGGAAAGATTATGACCGTTCAACATCGACTCTTTTGGATAATTCTGCCTATATGGTATGCATGATAAAGCTCAACTAGAGGAGTAACACAAAAAATGCCATGCATATATTTATCAATCAGCATGACTGAACTTGAAGTTGAACTGCATATGGTTGGCCATGGTGTATGTTGAAATAGTAACACAGTGGT]
[+] EMBL AK060939             [                                        CTTCGAGGCCCCCGTCGCGGCACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTATTTTTTTCTGCAAATGTTTGCAAAGACTCGTGATGGAATCAAAATGTAGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL C27242               [                                              GGCCCCCGTCGCGGCACCCTCCTCCGCNGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCCGGNTCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTNATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCTGGGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTNCGCCATTATCAGCT ATACCCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB630773             [                                                                                                                                                                                                                                                                                                                          AGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CB630774             [                                                                                                                                                                                                                                                                                                                                                TAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCT GGAAGAAGATAGGGGATGAAGTTTTGCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGATCGATTCCCCCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCCCCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCCCCTTTATTGGCCAGTTGTTGTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGAAAAGGATGTTCATGTTGTAGCACTATTTTTTTCTGCAActttaaagg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_11163#0 TCCAAAGGCTATTCTGAACCGAAGTCCTCCCACACCAAAACTTCGAGGCCCCCGTCGCGG CACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCC GGATCTTCACCGCCGGTGAAGTACTGAGGTGATGACTACATCAGAGTCAGTACAAGAAAC CTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTGCTGCCTCTGGAAG CGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAG AGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATAT TATTCTTTACACTGATGATGATGAATGGTCTACCTGGAAGAAGATAGGGGATGAAGTTTT GCACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCCATTATCAGCTAATAC CCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATGCATAGTGAGAGCATG GGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTTCATGTGGAACAACCC GTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATCTTTGGTCCCTCCCAT TACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGCTGAGCCTTCTGTGAT CGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATACAAATAGTTCACCTGT GGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTATTCTGTTCAAGATTA AACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACAAAATGAAATGTTAAG TGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTTGTACTACTATTAGTG ATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCACTTTAATGTTGCTTTT CCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTCATGTTGTAGCACTAT TTTTTTCTGCAAATGTTTGCAAAGACTCGTGATGGAATCAAAATGTAGCAGGTTGTTCTT TCATCCTTTTCTTTTTGTGCAGCATGCGTATATTGGAAGGTGAACTTGTCTGGTGTGCAA ATGCTGCACTTTCCTGCTTGGATACGCAGCCGCTAAAGCTTGGACATGACGGCTTACCTG AATCCTTTGTTTCGATCTACGCTTCCCTCTCGTTGATGACTGGTGATTTGTCGCATGGAT CACTTGAAGCTGGTGCAGGAACAAACTGAGAATGACATGTGGCAGGCAAGCCCTGTGAAT GCAAAAAAGAAAATGGTGACTAAGCAAGAAGATAATGCCAAGTTCAGATAAGCATTTGGT AGGGGATTGCAACAAGCTGGGTGAAGGTGGCGTTTCAAGTTTAGTCATCATCTGCACCCC ACAAGGATATGGTGAGGAATGGTTTACCGATCAATTGGAAAGATTATGACCGTTCAACAT CGACTCTTTTGGATAATTCTGCCTATATGGTATGCATGATAAAGCTCAACTAGAGGAGTA ACACAAAAAATGCCATGCATATATTTATCAATCAGCATGACTGAACTTGAAGTTGAACTG CATATGGTTGGCCATGGTGTATGTTGAAATAGTAACACAGTGGT



consensusID : consensus_11163#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 426
fasta sequence
                              [ACTTCGAGGCCCCCGTCGCGGCACCCNCCNCCGCCGCCGGATCNCCACCGGAGTACGGCGCCGGCCACNCCCNCCNCCCCCGGATCNTCACCGCCGTGGAGCGGTACAGGTGAAGTACTGAGGTGATGACNACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACNTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGANCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCTGGAAGAAGATAGGGGATGGAAGTTTTGGCACATTGAACNGCGAAAATGGGCAGATAT]

[+] EMBL C74879               [ACTTCGAGGCCCCCGTCGCGGCACCCNCCNCCGCCGCCGGATCNCCACCGGAGTACGGCGCCGGCCACNCCCNCCNCCCCCGGATCNTCACCGCCGTGGAGCGGTACAGGTGAAGTACTGAGGTGATGACNACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACNTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGANCCTTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCTGGAAGAAGATAGGGGATGGAAGTTTTGGCACATTGAACNGCGAAAATGGGCAGATAT]


>consensus_11163#1 ACTTCGAGGCCCCCGTCGCGGCACCCNCCNCCGCCGCCGGATCNCCACCGGAGTACGGCG CCGGCCACNCCCNCCNCCCCCGGATCNTCACCGCCGTGGAGCGGTACAGGTGAAGTACTG AGGTGATGACNACATCAGAGTCAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTA GCAAACNTCGGGTCCTCCTTGCTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGANCC TTTGCCGTAGCTTCTCGGAATGGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTAC ATTTTATTGATAGAACGTCTCTGCCTAGCAATATTATTCTTTACACTGATGATGATGAAT GGTCTACCTGGAAGAAGATAGGGGATGGAAGTTTTGGCACATTGAACNGCGAAAATGGGC AGATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11163#0      TCCAAAGGCTATTCTGAACCGAAGTCCTCCCACACCAAAACTTCGAGGCCCCCGTCGCGG 60
consensus_11163#1      ---------------------------------------ACTTCGAGGCCCCCGTCGCGG 21
                                                              *********************

consensus_11163#0      CACCCTCCTCCGCCGCCGGATCTCCACCGGAGTACGGCGCCGGCCACCCCCTCCTCCCCC 120
consensus_11163#1      CACCCNCCNCCGCCGCCGGATCNCCACCGGAGTACGGCGCCGGCCACNCCCNCCNCCCCC 81
                       ***** ** ************* ************************ *** ** *****

consensus_11163#0      GGATCTTCACCGCCG-------------GTGAAGTACTGAGGTGATGACTACATCAGAGT 167
consensus_11163#1      GGATCNTCACCGCCGTGGAGCGGTACAGGTGAAGTACTGAGGTGATGACNACATCAGAGT 141
                       ***** *********             ********************* **********

consensus_11163#0      CAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACCTCGGGTCCTCCTTG 227
consensus_11163#1      CAGTACAAGAAACCTTGGGATTGGATTTCCCTCATCCTAGCAAACNTCGGGTCCTCCTTG 201
                       ********************************************* **************

consensus_11163#0      CTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGAGCCTTTGCCGTAGCTTCTCGGAAT 287
consensus_11163#1      CTGCCTCTGGAAGCGTCGCTGCTATAAAATTTGAGANCCTTTGCCGTAGCTTCTCGGAAT 261
                       ************************************ ***********************

consensus_11163#0      GGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTC 347
consensus_11163#1      GGGCAGAAGTCAGAGCCGTCGCCACCAAGGCTTCATTACATTTTATTGATAGAACGTCTC 321
                       ************************************************************

consensus_11163#0      TGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCTGGAAGAAGATAG 407
consensus_11163#1      TGCCTAGCAATATTATTCTTTACACTGATGATGATGAATGGTCTACCTGGAAGAAGATAG 381
                       ************************************************************

consensus_11163#0      GGGATG-AAGTTTTG-CACATTGAACTGCGAAAATGGGCAGATATCATGGTGATTGCGCC 465
consensus_11163#1      GGGATGGAAGTTTTGGCACATTGAACNGCGAAAATGGGCAGATAT--------------- 426
                       ****** ******** ********** ******************               

consensus_11163#0      ATTATCAGCTAATACCCTAGCTAAGATTGCTGGTGGTTTATGTGACAACCTCTTGACATG 525
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      CATAGTGAGAGCATGGGACTACAGCAAACCACTCTTTGTTGCCCCAGCTATGAACACCTT 585
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      CATGTGGAACAACCCGTTCACCAGTCGTCATCTTGAGACAATCAACCTGCTAGGTATATC 645
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TTTGGTCCCTCCCATTACCAAAAGGCTGGCCTGTGGTGATTATGGTAATGGTGCAATGGC 705
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TGAGCCTTCTGTGATCGATTCCACCGTCAGGCTTGCTTGCAAGAGACAGCCACTTAATAC 765
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      AAATAGTTCACCTGTGGTTCCTGCCGGCAGAAACCTCCCATCTAGCTGATGCGGCAACTA 825
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TTCTGTTCAAGATTAAACTCTGGACCTAGTTTTCTATGGTAAAGAGTACTTCGTGTCACA 885
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      AAATGAAATGTTAAGTGATGTCTATGTCGGCCAACATAGCACCTTTATTGGCCAGTTGTT 945
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      GTACTACTATTAGTGATATGGTAGGACGTGGAGATTGGAGAAAGGCTATTGTCCCAGCAC 1005
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TTTAATGTTGCTTTTCCAAATTTCTTGTGACATAATGCTAAGGTGCTGATGAATATGTTC 1065
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      ATGTTGTAGCACTATTTTTTTCTGCAAATGTTTGCAAAGACTCGTGATGGAATCAAAATG 1125
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TAGCAGGTTGTTCTTTCATCCTTTTCTTTTTGTGCAGCATGCGTATATTGGAAGGTGAAC 1185
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TTGTCTGGTGTGCAAATGCTGCACTTTCCTGCTTGGATACGCAGCCGCTAAAGCTTGGAC 1245
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      ATGACGGCTTACCTGAATCCTTTGTTTCGATCTACGCTTCCCTCTCGTTGATGACTGGTG 1305
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      ATTTGTCGCATGGATCACTTGAAGCTGGTGCAGGAACAAACTGAGAATGACATGTGGCAG 1365
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      GCAAGCCCTGTGAATGCAAAAAAGAAAATGGTGACTAAGCAAGAAGATAATGCCAAGTTC 1425
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      AGATAAGCATTTGGTAGGGGATTGCAACAAGCTGGGTGAAGGTGGCGTTTCAAGTTTAGT 1485
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      CATCATCTGCACCCCACAAGGATATGGTGAGGAATGGTTTACCGATCAATTGGAAAGATT 1545
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      ATGACCGTTCAACATCGACTCTTTTGGATAATTCTGCCTATATGGTATGCATGATAAAGC 1605
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      TCAACTAGAGGAGTAACACAAAAAATGCCATGCATATATTTATCAATCAGCATGACTGAA 1665
consensus_11163#1      ------------------------------------------------------------
                                                                                   

consensus_11163#0      CTTGAAGTTGAACTGCATATGGTTGGCCATGGTGTATGTTGAAATAGTAACACAGTGGT 1724
consensus_11163#1      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)