cluster # 11166

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Oryza sativa
cluster # 11166 cluster # 11166 Sequences # 8 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11166#0 length = 2243 sequences # 7

consensus_11166#1 length = 688 sequences # 1

consensusID : consensus_11166#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2243
fasta sequence

                              [CCCCTCCCCTTGCAGATCTGATCGGCGACGGCGATCGCCGGACCACCACCGCCCGCCGCCATGGCGCTCACCCTCCGCAAGAAGCAGCTCGATTCGATCGTGAGGATGCTGCATCTGAACCAGCAGCTGCAGGGCTCGCCGGACGGGGTCGGCGGAGGGGTGGGGTCGGCGGAGGAGGAGGAGGCGTACAAGATCCTGGTGATGGACTCCCCCTGCGTCGCGCTCCTCGCGCCGGTGCTCCGCGTCGGGGAGCTCCGGAGGCACGGCGTCACGCTCCACCTCAACATCGACAAGGCGAGGCAGCAGGTCCCCGACGCCCCCGCCGTCTACCTGCTCCGCCCCACCGCCGCCAACGTCGACCGCGTCGCCGCCGACGCCGCCGCGGGCCTCTACGCCTCCTTCCACCTCAACTTCTCCACCTGCGTCCCGCGGGCCCTCCTCGAGCGCCTCGCCTCCGCCACCGCCGCCTCCCGCTCCGCGCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCTCTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGGTGTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAACTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACGGCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGTATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATACAAAGTTTTCTTATGATTTTATCTTTCCCGAGTCTGATATGAAGTGTCCATGTATGCTCATTTTCTTTTATCATCATTGATTTCTTTTGTCTCCTTTTGGTTCTCTGAGATTACCGAAATTATTCAGTGAAAAAAAAAAAAAGA]

[+] EMBL AK071474             [CCCCTCCCCTTGCAGATCTGATCGGCGACGGCGATCGCCGGACCACCACCGCCCGCCGCCATGGCGCTCACCCTCCGCAAGAAGCAGCTCGATTCGATCGTGAGGATGCTGCATCTGAACCAGCAGCTGCAGGGCTCGCCGGACGGGGTCGGCGGAGGGGTGGGGTCGGCGGAGGAGGAGGAGGCGTACAAGATCCTGGTGATGGACTCCCCCTGCGTCGCGCTCCTCGCGCCGGTGCTCCGCGTCGGGGAGCTCCGGAGGCACGGCGTCACGCTCCACCTCAACATCGACAAGGCGAGGCAGCAGGTCCCCGACGCCCCCGCCGTCTACCTGCTCCGCCCCACCGCCGCCAACGTCGACCGCGTCGCCGCCGACGCCGCCGCGGGCCTCTACGCCTCCTTCCACCTCAACTTCTCCACCTGCGTCCCGCGGGCCCTCCTCGAGCGCCTCGCCTCCGCCACCGCCGCCTCCCGCTCCGCGCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCTCTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGGTGTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAACTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACGGCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGTATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTA                                                                                                                                                                                                    ]
[+] EMBL AK072419             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGGTGTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAACTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACGGCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGTATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATACAAAGTTTTC                                                                                                                                      ]
[+] EMBL CB653375             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGGTGTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAACTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACGGCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGTATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF312072             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATGCTGTGAACTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACGGCGCTGCTTGGCC TATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGTATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTNTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CB643381             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTGCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCGTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTATCCAATTTCCAAAAAGGGCAGGTTTATGGCCTTGCTTTGAATGTCATCTAAAAAAAag                                                                                                                                          ]
[-] EMBL CB653376             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CACTGAATTCCCAGTTCGCTGGTGCATCAAACACCGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTTATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATACAAAGTTTTCTTATGATTTTATCTTTCCCGAGTCTGATATGAAGTGTCCATGTATGCTCATTTTCTTTTATCATCATTGATTTCTTTTGTCTCCTTTTGGTTCTCTGAGATTACCGAAATTATTCAGTGAAAAAAAAAAAAAGA]
[-] EMBL CF312073             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCCATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTAGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTTTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGTTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATCCTTAATGGGGTGGAGTTTATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTGCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCCTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATCAATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATACAAAGTTTTCTTATGATTTTAaaaaaaaa                                                                                                                   ]




>consensus_11166#0
CCCCTCCCCTTGCAGATCTGATCGGCGACGGCGATCGCCGGACCACCACCGCCCGCCGCC
ATGGCGCTCACCCTCCGCAAGAAGCAGCTCGATTCGATCGTGAGGATGCTGCATCTGAAC
CAGCAGCTGCAGGGCTCGCCGGACGGGGTCGGCGGAGGGGTGGGGTCGGCGGAGGAGGAG
GAGGCGTACAAGATCCTGGTGATGGACTCCCCCTGCGTCGCGCTCCTCGCGCCGGTGCTC
CGCGTCGGGGAGCTCCGGAGGCACGGCGTCACGCTCCACCTCAACATCGACAAGGCGAGG
CAGCAGGTCCCCGACGCCCCCGCCGTCTACCTGCTCCGCCCCACCGCCGCCAACGTCGAC
CGCGTCGCCGCCGACGCCGCCGCGGGCCTCTACGCCTCCTTCCACCTCAACTTCTCCACC
TGCGTCCCGCGGGCCCTCCTCGAGCGCCTCGCCTCCGCCACCGCCGCCTCCCGCTCCGCG
CACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCTC
TTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCC
GACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTC
GGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCG
CTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCG
TCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAG
CTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGC
CTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTC
TGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTT
GCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGGT
GTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAAC
TCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAACG
GCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAGT
ATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGGC
ACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGTG
CCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGCG
TTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACACC
GCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGCC
ATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGTA
GAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCCA
CGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGTT
TTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACGT
TCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTTT
ATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCTG
CCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTCC
TAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGATC
AATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATAC
AAAGTTTTCTTATGATTTTATCTTTCCCGAGTCTGATATGAAGTGTCCATGTATGCTCAT
TTTCTTTTATCATCATTGATTTCTTTTGTCTCCTTTTGGTTCTCTGAGATTACCGAAATT
ATTCAGTGAAAAAAAAAAAAAGA

consensusID : consensus_11166#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence

                              [CTTCCCTTCCCCCTCCCGGTTCGGTTCGGTTCGGGTCCGGTTCGATTTCGTTTTTTTTTCTTCTTCGTGGGGTTGGTGGGAAAGCATGGCGGCGCCGGATGTTGAGTACCGCCGCCTCCCGCTCCGCGCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCTCTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGT]

[+] EMBL CB643380             [CTTCCCTTCCCCCTCCCGGTTCGGTTCGGTTCGGGTCCGGTTCGATTTCGTTTTTTTTTCTTCTTCGTGGGGTTGGTGGGAAAGCATGGCGGCGCCGGATGTTGAGTACCGCCGCCTCCCGCTCCGCGCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCTCTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCTTGCCAAGTACAAGCAGGATGT]




>consensus_11166#1
CTTCCCTTCCCCCTCCCGGTTCGGTTCGGTTCGGGTCCGGTTCGATTTCGTTTTTTTTTC
TTCTTCGTGGGGTTGGTGGGAAAGCATGGCGGCGCCGGATGTTGAGTACCGCCGCCTCCC
GCTCCGCGCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGG
AGGGGCTCTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCG
CCGAGGCCGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTG
CCACGCTCGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCG
CCGCCGCGCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTG
AGGCCGCGTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGA
ATTTCGAGCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACG
TGCTCGGCCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTG
ATCCGTTCTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGG
CCCAGCTTGCCAAGTACAAGCAGGATGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11166#0      CCCCTCCCCTTGCAGATCTGATCGGCGACGGCGATCGCCGGACCACCACCGCCCGCCGCC 60
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      ATGGCGCTCACCCTCCGCAAGAAGCAGCTCGATTCGATCGTGAGGATGCTGCATCTGAAC 120
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CAGCAGCTGCAGGGCTCGCCGGACGGGGTCGGCGGAGGGGTGGGGTCGGCGGAGGAGGAG 180
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      GAGGCGTACAAGATCCTGGTGATGGACTCCCCCTGCGTCGCGCTCCTCGCGCCGGTGCTC 240
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CGCGTCGGGGAGCTCCGGAGGCACGGCGTCACGCTCCACCTCAACATCGACAAGGCGAGG 300
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CAGCAGGTCCCCGACGCCCCCGCCGTCTACCTGCTCCGCCCCACCGCCGCCAACGTCGAC 360
consensus_11166#1      ---------------------------------------------------CTTCCCTTC 9
                                                                               *  *

consensus_11166#0      CGCGTCGCCGCCGACGCCGCCGCGGGCCTCTACGCCTCCTTCCACCTCAACTTCTCCACC 420
consensus_11166#1      CCCCTCCCGGTTCGGTTCGGTTCGGG--TCCGGTTCGATTTCGTTTTTTTTTCTTCTTCG 67
                       * * ** * *       **   ****  **     *   ***    *    *  **  * 

consensus_11166#0      TGCGTCCCGCGGGCCCTCCTCG-AGCGCCTCGCCTCCGCCACCGCCGCCTCCCGCTCCGC 479
consensus_11166#1      TGGGGTTGGTGGGAAAGCATGGCGGCGCCGGATGTTGAGTACCGCCGCCTCCCGCTCCGC 127
                       ** *    * ***    * * *  *****     *     ********************

consensus_11166#0      GCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCT 539
consensus_11166#1      GCACCGCGTCGCCCGCGTCGCCGACCAGTACCTCGACTTCGTCTGCCTCGAGGAGGGGCT 187
                       ************************************************************

consensus_11166#0      CTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGC 599
consensus_11166#1      CTTCTCCCTCGCCCAGCCCAGGGCGTACGTCGCGCTCAACGACCCCGCCGCCGCCGAGGC 247
                       ************************************************************

consensus_11166#0      CGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCT 659
consensus_11166#1      CGACATCACCGCGCTCGTCGACGCCATCGCGCTCGGCCTCTTCTGCGTCGTTGCCACGCT 307
                       ************************************************************

consensus_11166#0      CGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGC 719
consensus_11166#1      CGGCGCCGTGCCCGTCATCAGGTGCGCTGGCGGCGGGCCGGCGGAGATGGTCGCCGCCGC 367
                       ************************************************************

consensus_11166#0      GCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGC 779
consensus_11166#1      GCTTGACGCCCGCCTCCGCGATCACCTCATCGCCAAGCCCAATCTCTTCACTGAGGCCGC 427
                       ************************************************************

consensus_11166#0      GTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGA 839
consensus_11166#1      GTCCACAGCAGTTGCATCCTTCCAGCGGCCACTCCTGTGCCTGTTTGATAGGAATTTCGA 487
                       ************************************************************

consensus_11166#0      GCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGG 899
consensus_11166#1      GCTTTCGGTGGGGATCCAGCATGATTGGAGCTACCGCCCGTTGGTCCACGACGTGCTCGG 547
                       ************************************************************

consensus_11166#0      CCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTT 959
consensus_11166#1      CCTGAAGTCGAACAAATTGAAGTTGCCAGAGAAGTATGATTTGGATGACACTGATCCGTT 607
                       ************************************************************

consensus_11166#0      CTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCT 1019
consensus_11166#1      CTGGGTGGCAAACAGCTGGTTGCAATTCCCCAAAGTGGCAGAGGAAATTGAGGCCCAGCT 667
                       ************************************************************

consensus_11166#0      TGCCAAGTACAAGCAGGATGTGGATGAGGTGAACCAGCGCACAGGTGGTGGCAGGGATGG 1079
consensus_11166#1      TGCCAAGTACAAGCAGGATGT--------------------------------------- 688
                       *********************                                       

consensus_11166#0      TGTTGAGTTTGATGGCACCGATCTCATTGGCAACACCAGGCATCTCATGAATGCTGTGAA 1139
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CTCGCTCCCAGAATTGACGGAACGGAAGAAGATGATTGACAAGCACACGAATATTGCAAC 1199
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      GGCGCTGCTTGGCCATATCAAGGGGAGGTCTCTGGATGGATATTTCGAGTGTGAGAATAG 1259
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TATGCTCGTGGATGGCACCTTGGACCGGACCAAGTTGATGAACCTGCTGAGAGGGAACGG 1319
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CACCAAGGAGGATAAGCTCCGACTGGCTGTGACCTACCTGCTTTCCTTCGAGACACCAGT 1379
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      GCCATCTGACTTAGAGCAGGTTGAGGCCGCTCTGCGTGAGTCAGAAGTGGACATGTCCGC 1439
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      GTTTCAGTATGTAAAGAGAATAAAGTCACTGAATTCCCAGTTCGCTGGTGCATCAAACAC 1499
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CGCAAGCAAGGTTAACATAGTTGATTGGGCAGAAAAGCTTTATGGGCACTCCATTAGTGC 1559
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CATGACAGGTGTGAGGAATTTGTTATCAGATGGAAAGCAGCTGGCCGCTACAAGGGCTGT 1619
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      AGAAGCTTTGATGGAGGGGAAACCAAATCCTGAAGTTGACAACTACTTACTATTTGATCC 1679
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      ACGGGCCCCTAAATCAGGAACTGCTGGACAGTTCAGAGGACCCTTCAGAGAGGCCATTGT 1739
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TTTCATGATTGGTGGTGGAAATTACATTGAATACAGGAGCTTGACAGAGCTAACGCAACG 1799
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TTCACAGACTACCAAGCAAGTCATATATGGAGCAACTGAAATTCTTAATGGGGTGGAGTT 1859
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TATTCAGCAACTCTCAGAACTGGGGCAGAAAGCAGGGTTGGGTGGTGTCAGCAGCAGCCT 1919
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      GCCACCCCAGTAAACAGGCTCCTTCAAGATATTTTGATGTTAATGGGTGTTTAAAGCTTC 1979
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CTAGATCAGTGGTATCTTACCAGACTTTTGATGTTAAAGAGTGGTCCAGACTGCATAGAT 2039
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CAATGGTATCCAATTTCCAAAAAGCTCAGGTTTATGGCCTTGCTTTGAATGTCATCTATA 2099
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      CAAAGTTTTCTTATGATTTTATCTTTCCCGAGTCTGATATGAAGTGTCCATGTATGCTCA 2159
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TTTTCTTTTATCATCATTGATTTCTTTTGTCTCCTTTTGGTTCTCTGAGATTACCGAAAT 2219
consensus_11166#1      ------------------------------------------------------------
                                                                                   

consensus_11166#0      TATTCAGTGAAAAAAAAAAAAAGA 2243
consensus_11166#1      ------------------------