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Oryza sativa
cluster # 11177 cluster # 11177       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11177#0 length = 1196 sequences # 2  
consensus_11177#1 length = 942 sequences # 5  
consensus_11177#2 length = 454 sequences # 1  

consensusID : consensus_11177#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1196
fasta sequence
                              [GCCGCTAGCGCCTGCGCCGATCTCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACNTCTCGGATGATTGGTCTA-TAATGCGTCAAATTTGGCCTTTGAAAAGTCTGTCTTTACTAAAAC-CTGAAGACAAATGCACGCTCAGAAGCTGAGAT-AATCTTAGCTTTGTTGCATGTGTTATCCCTCCATACCATGGCACATGCTTTTGCCACTTTGACAATTTGGCACATCACACATTCTGCTTCATGAATATAGCCTAATATGTCGTACTGTCATTATATAGAGTGGATTCATATTTGACACCTTTAACTGAAATTTCACACACATCTAGATCCAGTCTTAAGTTGAGCCCATCAATCATTATACTGCTTATATTACTCTGTAAGACGCTTGCATCTCCTTGGATGTTCATTAGAACTGGATGTGCTTTAAGTCTCACTCCAAAACATTTTAGTAGGAAACTCAAATTGTTTTATCCGTTGAATGTAATGGATCGGTCAGGTTAACCAAATGTAGTACAAGATACATGTCAGTTTTCTGTCTTTCGACATAAACAGGAGGGAAGATCCCTTCCCTACTGAAAATATATTAATAAAAGGATGTATGTACAAGGGAGAAGAAAGAATATACAAAGAGCAAAATATAGACTACTCAGCCATGCTTGTTAAAAAAAAAACACACCTAGCATTTACTCCCAAGGATAACTAAAGCAAAATACCTTGGATTCCCTTTCCAAGCTTTCAAGGAAAGATATCCTTCATATAAAATGATACTGTTTCAATGGTTTGAAATCATCCAGCAGTCTGTTATGATTATGTTAGTTTGCTGTTGCTAGCAACTCATTTTTATGGACAAAAATCTTCATATTTATGCTCAATGTTATAATTATGTCTCGATATATCCACTTTTCTGATCTTTATTCTTTAGTTGAATTTGGAATT]

[+] EMBL AU225166             [GCCGCTAGCGCCTGCGCCGATCTCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACNTCTCGGATGATTGGTCTA TAATGCGTCAAATTTGGCCTTTGAAAAGTCTGTCTTTACTAAAAC CTGAAGACAAATGCACGCTCAGAAGCTGAGAT AA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK073474             [                     CTCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCTGAAGACAAATGCACGCTCAGAAGGT ATTTCATTCTTAGCTTTGTTGCATGTGTTATCCCTCCATACCATGGCACATGCTTTTGCCACTTTGACAATTTGGCACATCACACATTCTGCTTCATGAATATAGCCTAATATGTCGTACTGTCATTATATAGAGTGGATTCATATTTGACACCTTTAACTGAAATTTCACACACATCTAGATCCAGTCTTAAGTTGAGCCCATCAATCATTATACTGCTTATATTACTCTGTAAGACGCTTGCATCTCCTTGGATGTTCATTAGAACTGGATGTGCTTTAAGTCTCACTCCAAAACATTTTAGTAGGAAACTCAAATTGTTTTATCCGTTGAATGTAATGGATCGGTCAGGTTAACCAAATGTAGTACAAGATACATGTCAGTTTTCTGTCTTTCGACATAAACAGGAGGGAAGATCCCTTCCCTACTGAAAATATATTAATAAAAGGATGTATGTACAAGGGAGAAGAAAGAATATACAAAGAGCAAAATATAGACTACTCAGCCATGCTTGTTAAAAAAAAAACACACCTAGCATTTACTCCCAAGGATAACTAAAGCAAAATACCTTGGATTCCCTTTCCAAGCTTTCAAGGAAAGATATCCTTCATATAAAATGATACTGTTTCAATGGTTTGAAATCATCCAGCAGTCTGTTATGATTATGTTAGTTTGCTGTTGCTAGCAACTCATTTTTATGGACAAAAATCTTCATATTTATGCTCAATGTTATAATTATGTCTCGATATATCCACTTTTCTGATCTTTATTCTTTAGTTGAATTTGGAATT]


>consensus_11177#0 GCCGCTAGCGCCTGCGCCGATCTCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGG GGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTG CATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGC CGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCT CCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTG TTGCCGTGAAATACNTCTCGGATGATTGGTCTATAATGCGTCAAATTTGGCCTTTGAAAA GTCTGTCTTTACTAAAACCTGAAGACAAATGCACGCTCAGAAGCTGAGATAATCTTAGCT TTGTTGCATGTGTTATCCCTCCATACCATGGCACATGCTTTTGCCACTTTGACAATTTGG CACATCACACATTCTGCTTCATGAATATAGCCTAATATGTCGTACTGTCATTATATAGAG TGGATTCATATTTGACACCTTTAACTGAAATTTCACACACATCTAGATCCAGTCTTAAGT TGAGCCCATCAATCATTATACTGCTTATATTACTCTGTAAGACGCTTGCATCTCCTTGGA TGTTCATTAGAACTGGATGTGCTTTAAGTCTCACTCCAAAACATTTTAGTAGGAAACTCA AATTGTTTTATCCGTTGAATGTAATGGATCGGTCAGGTTAACCAAATGTAGTACAAGATA CATGTCAGTTTTCTGTCTTTCGACATAAACAGGAGGGAAGATCCCTTCCCTACTGAAAAT ATATTAATAAAAGGATGTATGTACAAGGGAGAAGAAAGAATATACAAAGAGCAAAATATA GACTACTCAGCCATGCTTGTTAAAAAAAAAACACACCTAGCATTTACTCCCAAGGATAAC TAAAGCAAAATACCTTGGATTCCCTTTCCAAGCTTTCAAGGAAAGATATCCTTCATATAA AATGATACTGTTTCAATGGTTTGAAATCATCCAGCAGTCTGTTATGATTATGTTAGTTTG CTGTTGCTAGCAACTCATTTTTATGGACAAAAATCTTCATATTTATGCTCAATGTTATAA TTATGTCTCGATATATCCACTTTTCTGATCTTTATTCTTTAGTTGAATTTGGAATT



consensusID : consensus_11177#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 942
fasta sequence
                              [TCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCTGAAGACAAATGCACGCTCAGAAGCTGAGATAACATTGTTTGATGGCTATATTGTCGTTTATAAGTTTGTACAAGACCTTCATTTTTTTGTCA-CCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTT-TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGTAGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGCTAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAAAACTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTT-GAAGCATGTAATTGTTACCTTTTACTCATAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATATAATACTTGTACTCAGATTTATCTCATCAAGTGCTAATGATAGTTTCCATGATTGCT]

[+] EMBL AK061254             [TCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCTGAAGACAAATGCACGCTCAGAAGCTGAGATAACATTGTTTGATGGCTATATTGTCGTTTATAAGTTTGTACAAGACCTTCATTTTTTTGTCA CCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTT TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGTAGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGCTAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAAAACTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTT GAAGCATGTAATTGTTACCTTTTACTCATAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATATAATACTTGTACTCAGATTTATCTCATCAAGTGCTAATGATAGTTTCCATGATTGCT]
[+] EMBL AB040041             [                                                                                                                                                                                                                                                                         GAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCTGAAGACAAATGCACGCTCAGAAGCTGAGATAACATTGTTTGATGGCTATATTGTCGTTTATAAGTTTGTACAAGACCTTCATTTTTTTGTCA CCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTT TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGTAGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGCTAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAAAACTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTT GAAGCATGTAATTGTTACCTTTTACTCATAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATATAATACTTGTACTCAGATTT                                     ]
[+] EMBL C28830               [                                                                                                                                                                                                                                                                         GAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCTGAAGACAAATGCACGCTCAGAAGCTGAGATAACATTGTTTGATGGCTATATTGTCGTTTATAAGTTTGTACAAGACCTTCATTTTTTTGTCA CCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTT TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACT                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU032419             [                                                                                                                                                                                                                                                                                                                                                                                                                                      AGTTTGTACAAGACCTTCATTTTTTTGTCA CCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTT TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGTAGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTA NCACTGCTAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAANACTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTTGGAAGCATGTAATTGGTACCTTTTAC                                                                                                       ]
[-] EMBL BE229309             [                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTTTTGTCACCCGCTGGTGATGATGAGAATGAGCTCATTATAGCAAATGTACTACAGGGCTTTTCGGATTCTGTTGTTCTTTAAATTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGTAGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGCTAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAAAACTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTT GAAGCATGTAATTGTTACCTTTTACTCATAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATATAATACTTGTACTCA                                          ]


>consensus_11177#1 TCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGGGGCGCCCATCTCCATCCGGCGA GCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTGCATCCTGTTTTGAGCCTGGATC TTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGCCGTGTCTCCTCCACAGGAAGGA AGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCTCCAAGGAATCTTGCCCTTCTGT GAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTGTTGCCGTGAAATACTTCTCGGA TGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAAAGTCTGTCTTTACTAAAACTCT GAAGACAAATGCACGCTCAGAAGCTGAGATAACATTGTTTGATGGCTATATTGTCGTTTA TAAGTTTGTACAAGACCTTCATTTTTTTGTCACCGCTGGTGATGATGAGAATGAGCTCAT TATAGCAAATGTACTACAGGGCTTCTCTGATTCTGTTGGTCTTTTACTCAGGGGTGATGT TGAGAAGAGGACTGCACTCGAGAATCTGGACTTGATACTTCTCTGCATCGATGAAATTGT AGATGGCGGCATAATTCTGGAAACAGATGCAAATACCATTGCCGGGAAGGTTGCAACCAA TGCTGTTGATGGTTCTGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGC TAGGGAGCACCTTGCAAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTTAAAA CTTCTCTGCGTTGAGGATTGGGCGAGTGTACGTTGAAGCATGTAATTGTTACCTTTTACT CATAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATATAATACTTGTACTCA GATTTATCTCATCAAGTGCTAATGATAGTTTCCATGATTGCT



consensusID : consensus_11177#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 454
fasta sequence
                              [TGAGTACAAGTATATATCATATTCAACTATTTTTTCCGTCACAATTACACTTTATTATGAGTAAAAGGTAACAAATATTTGCTTCTTCGTACACTCTCCCAAACCTCTTGGCAGAGAAGTTTCAAGGAATCAAAAGAATTATGATTTACTTGAGCAAAGATCTGGGGGTGTGCTCCCTAGCAGTGGCTAAATCCTGAGATATCGTCTGCTCCAAAAAGGGGGCAGAACCATCAACAGCATTGGTTGCGGGTTCCCGGCAATGGTATTTGCATCTGTTTCCAGAATTATGCCGGGGGGGTGTTTTCATCGAGGCAGAGAAGTGGCGGGTCCCCACCCGCGAGTAATTTCCTCTTCTCAACATCACCCCTGAGTGAAANACCAACANAATNAGANAACCCTGTGGTNCCTTTGCTATAATGAGCTCTNCTCNTCGGNGNANCAGTNACAAANTNGT]

[+] EMBL BE229308             [TGAGTACAAGTATATATCATATTCAACTATTTTTTCCGTCACAATTACACTTTATTATGAGTAAAAGGTAACAAATATTTGCTTCTTCGTACACTCTCCCAAACCTCTTGGCAGAGAAGTTTCAAGGAATCAAAAGAATTATGATTTACTTGAGCAAAGATCTGGGGGTGTGCTCCCTAGCAGTGGCTAAATCCTGAGATATCGTCTGCTCCAAAAAGGGGGCAGAACCATCAACAGCATTGGTTGCGGGTTCCCGGCAATGGTATTTGCATCTGTTTCCAGAATTATGCCGGGGGGGTGTTTTCATCGAGGCAGAGAAGTGGCGGGTCCCCACCCGCGAGTAATTTCCTCTTCTCAACATCACCCCTGAGTGAAANACCAACANAATNAGANAACCCTGTGGTNCCTTTGCTATAATGAGCTCTNCTCNTCGGNGNANCAGTNACAAANTNGT]


>consensus_11177#2 TGAGTACAAGTATATATCATATTCAACTATTTTTTCCGTCACAATTACACTTTATTATGA GTAAAAGGTAACAAATATTTGCTTCTTCGTACACTCTCCCAAACCTCTTGGCAGAGAAGT TTCAAGGAATCAAAAGAATTATGATTTACTTGAGCAAAGATCTGGGGGTGTGCTCCCTAG CAGTGGCTAAATCCTGAGATATCGTCTGCTCCAAAAAGGGGGCAGAACCATCAACAGCAT TGGTTGCGGGTTCCCGGCAATGGTATTTGCATCTGTTTCCAGAATTATGCCGGGGGGGTG TTTTCATCGAGGCAGAGAAGTGGCGGGTCCCCACCCGCGAGTAATTTCCTCTTCTCAACA TCACCCCTGAGTGAAANACCAACANAATNAGANAACCCTGTGGTNCCTTTGCTATAATGA GCTCTNCTCNTCGGNGNANCAGTNACAAANTNGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11177#0      GCCGCTAGCGCCTGCGCCGATCTCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGG 60
consensus_11177#1      ----------------------TCCATCTCGCGACTCGCGAGCAGAGCAGGGTTGGTAGG 38
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      GGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTG 120
consensus_11177#1      GGCGCCCATCTCCATCCGGCGAGCAGAGCAGAGCGGAGGAGGTGCGCCATCGTCCCGCTG 98
consensus_11177#2      ----------TGAGTACAA-GTATATATCATATTCAACTATTTTTTCCGTCA--CAATTA 47
                                 *   * *   *   * * ** *    *  *  *   ** **   *   * 

consensus_11177#0      CATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGC 180
consensus_11177#1      CATCCTGTTTTGAGCCTGGATCTTGCCAAACAAGTGGTTGATCTTACTGCTTTCGGTGGC 158
consensus_11177#2      CACTTTATTATGAG--TAAAAGGTAACAAATATTTGCTTCTTCGTAC-ACTCTC-----C 99
                       **   * ** ****  *  *   *  **** *  ** **  ** ***  ** **     *

consensus_11177#0      CGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCT 240
consensus_11177#1      CGTGTCTCCTCCACAGGAAGGAAGGCACCGGGGATCTAGAGGAGGCCATGGGAGAATTCT 218
consensus_11177#2      CAAACCTCTT-----GGCAGAGAAGTTTCAAGGAATCAAAAGAA-TTATGATTTACTTGA 153
                       *    *** *     ** **  * *   *  ***   * * **    ***    * **  

consensus_11177#0      CCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTG 300
consensus_11177#1      CCAAGGAATCTTGCCCTTCTGTGAAGAACATTTTGCTTCTGGATTCTGAAGGGAAACGTG 278
consensus_11177#2      GCAAAGA-TCTGGGGGTGTGCTCCCTAGCA----GTGGCTAAATCCTGA--GATATCGT- 205
                        *** ** *** *   *    *    * **    *   **  ** ****  *  * *** 

consensus_11177#0      TTGCCGTGAAATACNTCTCGGATGATTGGTCTA-TAATGCGTCAAATTTGGCCTTTGAAA 359
consensus_11177#1      TTGCCGTGAAATACTTCTCGGATGATTGGTCTAGTAATGCGTCAAAGTTGGCCTTTGAAA 338
consensus_11177#2      CTGCTCCAAAAAGGGGGCAGAACCATCAACAGCATTGGTTGCGGGTTCCCGGCAATGGTA 265
                        ***    ***        * *  **        *     *         * *  **  *

consensus_11177#0      AGTCTGTCT-TTACTAAAAC-CTGA-AGACAAATGCACGCTCAGAAGCTGAGATAATCTT 416
consensus_11177#1      AGTCTGTCT-TTACTAAAACTCTGA-AGACAAATGCACGCTCAGAAGCTGAGATAACATT 396
consensus_11177#2      TTTGCATCTGTTTCCAGAATTATGCCGGGGGGGTGTTTTCATCGAGGCAGAGAAGTGGCG 325
                         *   *** ** * * **   **   *     **    *   ** ** ****       

consensus_11177#0      AGCTTTGTTGCATGTGTTATCCCTCCATACCATGGCACATG-CTTTTGCCACTTTGACAA 475
consensus_11177#1      G--TTTGATGGCTATATTGTCGTTT-ATAAGTTTGTACAAGACCTTCATTTTTTTGTCAC 453
consensus_11177#2      GGTCCCCACCCGCGAGTAATTTCCT--CTTCTCAACATCAC-CCCTGAGTGAAANACCAA 382
                                       *  *                *     *  *           ** 

consensus_11177#0      TTTGGCACATCACACATTCTGCTTCATGAATATAGCCTAATATGTCGTACTGTCATTATA 535
consensus_11177#1      CGCTGGTGATGATGAGAATGAGCTCAT---TATAGC---AAATGTACTACAGGGCTTCTC 507
consensus_11177#2      CANAATNAGANAACCCTGTGGTNCCTTTGCTATAAT--GAGCTCTNCTCNTCGGNGNANC 440
                                  *            * *   ****     *  * *  *            

consensus_11177#0      TAGAGTGGATTCATATTTGACACCTTTAACTGAAATTTCACACACATCTAGATCCAGTCT 595
consensus_11177#1      T-GATTCTGTTGGTCTTT--TACTCAGGGGTGATGTTGAGAAGAGGACTGCACTCGAG-- 562
consensus_11177#2      AGTNACAAANTNGT---------------------------------------------- 454
                                 *  *                                              

consensus_11177#0      TAAGTTGAGCCCATCAATCATTATACTGCTTATATTACTCTGTAAGACGCTTGCATCTCC 655
consensus_11177#1      -AATCTGGACTTGATACTTCT----CTGCATCGATGAAATTGTA-GATGGCGGCATAATT 616
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      TTGGATGTTCATTAGAACTGGATGTGCTTTAAGTCTCACTCCAAAACATTTTAGTAGGAA 715
consensus_11177#1      CTGGAAACAGATGCAAATACCAT-TGCCGGGAAGGTTGCAACCAATGCTGTTGATGGTTC 675
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      ACTCAAATTGTTTTATCCGTTGA-ATGTAATGGATCGGTCAGGTTAACCAAATGTAGTAC 774
consensus_11177#1      TGCCCCCTTCTCTGAGCAGACGATATCTCAGGCTTTAGCCACTGCTAGGGAGCACCTTGC 735
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      AAGATA------CATGTCAGTTTTCTGTCTTTCGACATAAACAGGAGGGAAGATCCCTTC 828
consensus_11177#1      AAGATCTCTGCTCAAGTAAATCATTTATCTTTTGACTCCTT---------AAAACTTCTC 786
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      CCTACTGAAAATATATTAATAAAAGGATGTATGTACAAGGGAGAAGAAAGAATATACAAA 888
consensus_11177#1      TGCGTTGAGGAT---TGGGCGAGTGTACGT-TGAAGCATGTAATTGTTACCTTTTACTCA 842
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      GAGCAAAATATAGACTACTCAGCCATGCTTGTTAAAAAAAAAACACACCTAGCATTTACT 948
consensus_11177#1      TAATAAAGTGTAATTGTGACGGAAAAAATAGTTGAATATGATA------TAATACTTGTA 896
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      CCCAAGGATAACTAAAGCAAAATACCTTGGATTCCCTTTCCAAGCTTTCAAGGAAAGATA 1008
consensus_11177#1      CTCAGATTTATCTCA--TCAAGTGCTAATGATAG--TTTCCATGATTGCT---------- 942
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      TCCTTCATATAAAATGATACTGTTTCAATGGTTTGAAATCATCCAGCAGTCTGTTATGAT 1068
consensus_11177#1      ------------------------------------------------------------
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      TATGTTAGTTTGCTGTTGCTAGCAACTCATTTTTATGGACAAAAATCTTCATATTTATGC 1128
consensus_11177#1      ------------------------------------------------------------
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      TCAATGTTATAATTATGTCTCGATATATCCACTTTTCTGATCTTTATTCTTTAGTTGAAT 1188
consensus_11177#1      ------------------------------------------------------------
consensus_11177#2      ------------------------------------------------------------
                                                                                   

consensus_11177#0      TTGGAATT 1196
consensus_11177#1      --------
consensus_11177#2      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)