cluster # 11183

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Oryza sativa
cluster # 11183 cluster # 11183 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_11183#0 length = 2390 sequences # 5

consensus_11183#1 length = 784 sequences # 1
consensus_11183#2 length = 632 sequences # 2

consensusID : consensus_11183#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2390
fasta sequence

                              [GGGACGTGGCCCAGCTCACCTCGTCCCCCTCCGGCCATCTCCCCTCTCCTCCACCAAAATCCTCCTCCGATCCAAATCCACCAACCCTCGCCGCCGCCGCCACCGCCGCCTATGCCGCCGCCGCCGTCGCCGGCTGCCTAGGGTTACGGCGGCCGCAGCTCCCCCCCACTTCGCCGGCGCGATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCTTCCACTCCGTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGCCGCCGGGTTACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCGAGCGCGTCACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATAAGCCCAAGGTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCGACTCCGAGCGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACCACGTACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCGCCAAGCGGAAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCATGCACCACCTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCGTCGCCGTGCACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGCAGCGCGGGCACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAGTTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGAGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGGTGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTGATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAATTTGTAACAATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACACAAGAAAG-CCACGTAC-TTGGGTTTCTTC-AAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATA-CTTTCATGTCCTCC-TTTTCCGTTCTGGAAA-CCCTTGTAGGATGCTCTGCTGAGACGGTGAAGC-TTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAATTCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGGTTGTTTTAGTATAAAAAA]

[+] EMBL AK068414             [GGGACGTGGCCCAGCTCACCTCGTCCCCCTCCGGCCATCTCCCCTCTCCTCCACCAAAATCCTCCTCCGATCCAAATCCACCAACCCTCGCCGCCGCCGCCACCGCCGCCTATGCCGCCGCCGCCGTCGCCGGCTGCCTAGGGTTACGGCGGCCGCAGCTCCCCCCCACTTCGCCGGCGCGATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCTTCCACTCCGTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGCCGCCGGGTTACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCGAGCGCGTCACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATAAGCCCAAGGTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCGACTCCGAGCGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACCACGTACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCGCCAAGCGGAAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCATGCACCACCTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCGTCGCCGTGCACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGCAGCGCGGGCACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAGTTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGAGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGGTGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTGATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAATTTGTAACAATGATGCGGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACACAAGAAAG CCACGTAC TTGGGTTTCTTC AAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATA CTTTCATGTCCTCC TTTTCCGTTCTGGAAA CCCTTGTAGGATGCTCTGCTGAGACGGTGAAGC TTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAATTCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGG                  ]
[+] EMBL CA764243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGGTGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTGATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGA  GACTACAATGAATTTGTAACAATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTATTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACAGAAGAAAG CCACGTACTTTGGGTTTCTTC AAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGNGGTTTTTTTT CTTTTTTTAATAGGCACAACTCACAAGAATAGCGGGGGGGGTGGTTCATACCTTTCATGNCCTCCTTTTTCCGNTCTGGAAACCCCTTGTAGGATGCTCTGCTGANACGGTGAANCNTTTGACACGCTTGGAACTTCGGATTGGAna                                                                                                                         ]
[+] EMBL OSR18041A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CCCTAATGGAAGCGGCTGATATTGATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAATTTGTAACAATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AK059003             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACACAAGAAAG CCACGTAC TTGGGTTTCTTC AAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATA CTTTCATGTCCTCC TTTTCCGTTCTGGAAA CCCTTGTAGGATGCTCTGCTGAGACGGTGAAGC TTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAATTCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGGTT                ]
[+] EMBL C22587               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACACAAGAAAGCCCACGTAC TTGGGTTTCTTCNAAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATA CTTTCATGTCCTCC TTTTCCGTTCTGGAAA CCCTTGTAGGATGCTCTGCTGAGACGGTGAAGC TTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAATTCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGGTTGTTTTAGTATAAAAAA]




>consensus_11183#0
GGGACGTGGCCCAGCTCACCTCGTCCCCCTCCGGCCATCTCCCCTCTCCTCCACCAAAAT
CCTCCTCCGATCCAAATCCACCAACCCTCGCCGCCGCCGCCACCGCCGCCTATGCCGCCG
CCGCCGTCGCCGGCTGCCTAGGGTTACGGCGGCCGCAGCTCCCCCCCACTTCGCCGGCGC
GATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCTTCCACTC
CGTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGCCGCCGGG
TTACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCGAGCGCGT
CACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATAAGCCCAA
GGTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCGACTCCGA
GCGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACCAC
GTACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCGCCAAGCG
GAAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCATGCACCA
CCTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCGTCGCCGT
GCACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGCAGCGCGG
GCACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGC
GTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAA
CCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCC
AGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGAT
GAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCT
TAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAGTTTTGAA
AGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTT
GGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATG
TCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTT
AACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCAT
TGCTGAAAATTTATCGGAAGATGAAATTGCGAGATTGAGAGAAATGTTCAAAATGTTGGA
CACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGG
TGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAAGCGGCTGATATTGATAATAG
TGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATGCATCTGAACAAAGTTGAGAG
AGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAAGACAGCAGTGGTTACATTAC
TCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATAGGAGATGCACATCTGGAGGA
TATCATCAAAGATATTGATCAGGACAATGATGGCCGGATCGACTACAATGAATTTGTAAC
AATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGGCAAGGCCAGCTAAGTTTTGG
TCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTACCCCTGAATGTAGAATGGAGT
GCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTG
GTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGC
CGGACACACAAGAAAGCCACGTACTTGGGTTTCTTCAAAGAGTTCAACATCCGTGGACCC
TCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCG
TGTGTGTTGTTTCATACTTTCATGTCCTCCTTTTCCGTTCTGGAAACCCTTGTAGGATGC
TCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGACGAGA
TTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAAATGTTGTAAGAATTCGTAGG
TTGTAACATAAACAGTAAAATGAATGAAATGGTTGTTTTAGTATAAAAAA

consensusID : consensus_11183#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 784
fasta sequence

                              [TCCGACAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAACAAGTTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTAAGCATAAATATCACATTGCAGAGCATCATGTCAGAGCCTTCTCTAGTGACCCATCTTTATGTTGGCAGGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGG]

[+] EMBL CB628416             [TCCGACAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGAGTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAACAAGTTTTGAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTAAGCATAAATATCACATTGCAGAGCATCATGTCAGAGCCTTCTCTAGTGACCCATCTTTATGTTGGCAGGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAGTTGG]




>consensus_11183#1
TCCGACAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGCGTGCCAT
TCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAACCATAAG
GAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAAGCCAGGCGAA
AATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGATGAAGCAT
TATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATTTATATCTTGCTTAGTGGA
GTTCCTCCATTTTGGGATGAATCTGAACAAGGGATATTTGAACAAGTTTTGAAAGGAGAT
CTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGATTTGGTGAGG
AAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCTCTATGTAAGCAT
AAATATCACATTGCAGAGCATCATGTCAGAGCCTTCTCTAGTGACCCATCTTTATGTTGG
CAGGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAACCTCTTGATTCTGCTG
TCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAGAAGATGGCCCTTAGGG
TCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGAGAAATGTTCAAAATGT
TGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAAACTGGCTTGCGGAGAG
TTGG

consensusID : consensus_11183#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 632
fasta sequence

                              [TGTTAGCTTAATTATAACTCCTTTAGTTTACTAAATACTGATTGCCTTTTGATCTAGTGCATTGGTGGATATTACACTTTGATACATAATAATAATATGGTTATCCCTGCAAGAAAATTAATATGGTTATCATTTACTCTCTCTCTCTCTTTATTTTTGCAGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATATTAATATGGTTATCATTTACTCTCTCTCTTTATTTTTGCAGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTATTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACAGAAGAAAGCCACGTACTTGGGTTTCTTCAAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATACTTTCATGTCCTCCTTTTCCGTTCTGGAAACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGGGGAGATT]

[-] EMBL CB628417             [TGTTAGCTTAATTATAACTCCTTTAGTTTACTAAATACTGATTGCCTTTTGATCTAGTGCATTGGTGGATATTACACTTTGATACATAATAATAATATGGTTATCCCTGCAAGAAAATTAATATGGTTATCATTTACTCTCTCTCTCTCTTTATTTTTGCAGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATATTAATATGGTTATCATTTACTCTCTCTCTTTATTTTTGCAGGAATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTATTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCAGCCGGACACAGAAGAAAGCCACGTACTTGGGTTTCTTCAAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTTCCTTTTTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATACTTTCATGTCCTCCTTTTCCGTTCTGGAAACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCGGATTGGAGAGTTGGGGGAGATT]
[+] EMBL CF330902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATACCTTCATGTCCTCCTTTTCCGTTCTGGAAACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGA                            ]




>consensus_11183#2
TGTTAGCTTAATTATAACTCCTTTAGTTTACTAAATACTGATTGCCTTTTGATCTAGTGC
ATTGGTGGATATTACACTTTGATACATAATAATAATATGGTTATCCCTGCAAGAAAATTA
ATATGGTTATCATTTACTCTCTCTCTCTCTTTATTTTTGCAGGAATAACTACCCCTGAAT
GTAGAATGGAGTGCTATATTAATATGGTTATCATTTACTCTCTCTCTTTATTTTTGCAGG
AATAACTACCCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCA
AGAAAGCAGAAGATCAAAGACAAACGTTGGTGTTATTCCTTTATCAACACTCTGTGAAGA
TACAAACTAACTTTTTGGGTTCCATCAGCCGGACACAGAAGAAAGCCACGTACTTGGGTT
TCTTCAAAGAGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTTCCTTT
TTTAAATAGGCACAACTCACAAGAATAGCGTGTGTGTTGTTTCATACTTTCATGTCCTCC
TTTTCCGTTCTGGAAACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCT
TGGAACTTCGGATTGGAGAGTTGGGGGAGATT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11183#0      GGGACGTGGCCCAGCTCACCTCGTCCCCCTCCGGCCATCTCCCCTCTCCTCCACCAAAAT 60
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CCTCCTCCGATCCAAATCCACCAACCCTCGCCGCCGCCGCCACCGCCGCCTATGCCGCCG 120
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CCGCCGTCGCCGGCTGCCTAGGGTTACGGCGGCCGCAGCTCCCCCCCACTTCGCCGGCGC 180
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GATGGGGAACACCTGCGTCGGCCCCAGCTCCGCGGCGGACCGCCACGGCTTCTTCCACTC 240
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CGTCTCCCTCGCCGTGCTCTGGCGCCCCGGTGGCCGCGCCGAGCCGTCGCAGCCGCCGGG 300
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      TTACCCGCCTCGGGAGTCGAGCCACTCCTCCGTCACCTCGTCCACGGCGCCCGAGCGCGT 360
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CACCATCGCCGACTCCGACCTCTCCTCCTCCACCCCCAACAAGGGCGGGAATAAGCCCAA 420
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GGTGAGGCGCGTCCAGAGCGCGGGGCTCCTCGCCGACTCCGTCCTCAAGCGCGACTCCGA 480
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GCGGCTCAAGGACCTCTACACCCTGGGGAAGAAGCTCGGGCAGGGGCAGTTCGGGACCAC 540
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GTACCAGTGCGTGGAGAAGGCCACGGGGAAGGTGCTCGCCTGCAAGTCCATCGCCAAGCG 600
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GAAGCTGGTCAGCGAGGAGGACGTGGAGGACGTGCGCCGGGAGATCCAGATCATGCACCA 660
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CCTCGCCGGCCACCCGAGCGTGGTCTCCATCGTCGGCGCGTACGAGGACGCCGTCGCCGT 720
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GCACCTCGTCATGGAGCTCTGCGCTGGCGGGGAGCTGTTTGATAGGATCGTGCAGCGCGG 780
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GCACTACTCCGAGAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGC 840
consensus_11183#1      -------TCCGACAAGGCGGCCGCGCAGCTGGCGCGGGTGATCATCGGTGTCGTCGAGGC 53
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAA 900
consensus_11183#1      GTGCCATTCGCTCGGGGTGATGCACAGAGACCTCAAGCCGGAGAACTTCTTGTTTGTCAA 113
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAA-GC 959
consensus_11183#1      CCATAAGGAGGACTCGCCACTCAAGACGATCGATTTTGGGCTTTCCATTTTCTTCAA-GC 172
consensus_11183#2      ----------------------TGTTAGCTTAATTATAACTCCTTTAGTTTACTAAATAC 38
                                                  * *  *** *      *  * ***  * **  *

consensus_11183#0      CAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGA 1019
consensus_11183#1      CAGGCGAAAATTATTCGGATGTTGTTGGAAGTCCTTACTATGTTGCACCTGAGGTTCTGA 232
consensus_11183#2      TGATTGCCTTTTGATCTAGTGC-ATTGGTGGATATTACACTTTGATACATAATAATAATA 97
                            *    **  **   **   ****  *   ****  * *   ** * *   *   *

consensus_11183#0      TGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATT-TATATCTTG 1078
consensus_11183#1      TGAAGCATTATGGCCGCGAGGTGGATGTATGGAGTGCTGGTGTAATCATT-TATATCTTG 291
consensus_11183#2      TGG----TTATCCCTGCAAGA-AAATTAATATGGTTATCATTTACTCTCTCTCTCTCTTT 152
                       **     ****  * ** **    **  **   **  *  * ** **  * * * **** 

consensus_11183#0      CTTAGTGGAGTTCCT-CCATTTTGGGATGAATCTGAACAAGGGATATTTGAAAAAGTTTT 1137
consensus_11183#1      CTTAGTGGAGTTCCT-CCATTTTGGGATGAATCTGAACAAGGGATATTTGAACAAGTTTT 350
consensus_11183#2      ATTTTTGCAGGAATAACTACCCCTGAATGTAG--AATGGAGTGCTATATTAATATGGTT- 209
                        **  ** **      * *     * *** *    *   ** * *** * ** * * ** 

consensus_11183#0      GAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGA 1197
consensus_11183#1      GAAAGGAGATCTTGATTTTTCATCTGATCCCTGGCCTGCTATCTCAGACAGTGCAAAGGA 410
consensus_11183#2      -ATCATTTACTCTCTCTCTTTATTTT-TGCAGGAATAACTACCCCTGAATGTAGAATGGA 267
                        *      *   *   * ** ** *  * *  *     *** * * **  **  ** ***

consensus_11183#0      TT--TGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCT 1255
consensus_11183#1      TT--TGGTGAGGAAAATGTTAAACCGTGATCCCAGAAAGAGATTGACTGCACATGAAGCT 468
consensus_11183#2      GTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAGAAGATCAAAGACAAACGT 327
                        *  *  * ** ***     **  *   ** * ******     **    * *  **  *

consensus_11183#0      CTATGT------------------------------------------------------ 1261
consensus_11183#1      CTATGTAAG--CATAAATATCACATTGCAGAGCATCATGTCAGAGCCTTC--TCTAGTGA 524
consensus_11183#2      TGGTGTTATTCCTTTATCAACACTCTGTGAAGATACAAACTAACTTTTTGGGTTCCATCA 387
                          ***                                                      

consensus_11183#0      ---------------------CATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAA 1300
consensus_11183#1      CCCATCTTTATGTTGGCAGGTCATCCTTGGGTTTGTGTTGATGGAGTTGCTCCTGATAAA 584
consensus_11183#2      GCCGGACACAGAAGAAAGCCACGTACTTGGGTTTCT-TCAAAGAGTTCAACATCCGTGGA 446
                                            * * ********* * *  * *   *         *  *

consensus_11183#0      CCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAG 1360
consensus_11183#1      CCTCTTGATTCTGCTGTCTTAACTAGATTGAAGCAATTTTCAGCAATGAACAAGCTAAAG 644
consensus_11183#2      CCCTCCAACCGTATAGGTGTTTTTTTTTT----CCTTTTTTAAATAGGCACAA-CTCACA 501
                       **     *   *   *   *   *   **    *  **** *   * * **** ** *  

consensus_11183#0      AAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGAGATTGAGA 1420
consensus_11183#1      AAGATGGCCCTTAGGGTCATTGCTGAAAATTTATCGGAAGATGAAATTGCGGGATTGAGA 704
consensus_11183#2      AGAATAGCGTGTGTG----TTGTTTCATACTTTC---ATGTCCTCCTTTTCCGTTCTGGA 554
                       *  ** **   *  *    *** *  * * **     * *      **    * *   **

consensus_11183#0      GAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAA 1480
consensus_11183#1      GAAATGTTCAAAATGTTGGACACTGATAATAGTGGTCAGATCACATTGGAGGAACTAAAA 764
consensus_11183#2      AACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCGGATT 614
                        *    *  *  *** *   *   **   *   * *  **     *****    *  *  

consensus_11183#0      ACTGGCTTGCGGAGAGTTGGTGCTAATTTGAAGGATTCGGAAATTACAACCCTAATGGAA 1540
consensus_11183#1      ACTGGCTTGCGGAGAGTTGG---------------------------------------- 784
consensus_11183#2      GGAGAGTTGGGGGAGATT------------------------------------------ 632
                          *  *** **    **                                          

consensus_11183#0      GCGGCTGATATTGATAATAGTGGTTCAATAGATTATGGGGAGTTCATTGCTGCAACTATG 1600
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CATCTGAACAAAGTTGAGAGAGAAGATAATCTTTTTGCAGCGTTTTCATACTTTGATAAA 1660
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GACAGCAGTGGTTACATTACTCAAGATGAGCTACAAAAAGCCTGTGAGGAATTTGGCATA 1720
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GGAGATGCACATCTGGAGGATATCATCAAAGATATTGATCAGGACAATGATGGCCGGATC 1780
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GACTACAATGAATTTGTAACAATGATGCAGAAAGGGAATAATCCACTAGGGAAAAAGGGG 1840
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CAAGGCCAGCTAAGTTTTGGTCTAAGGGAAGCATTGAAGCTTGGTTAATGGAATAACTAC 1900
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CCCTGAATGTAGAATGGAGTGCTATTTAGTAAAGGACGAAGACTGAATTCAAGAAAGCAG 1960
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      AAGATCAAAGACAAACGTTGGTGTTACTCCTTTATCAACACTCTGTGAAGATACAAACTA 2020
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      ACTTTTTGGGTTCCATCAGCCGGACACACAAGAAAGCCACGTACTTGGGTTTCTTCAAAG 2080
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      AGTTCAACATCCGTGGACCCTCCAACCGTATAGGTGTTTTTTTTTCCTTTTTTAAATAGG 2140
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      CACAACTCACAAGAATAGCGTGTGTGTTGTTTCATACTTTCATGTCCTCCTTTTCCGTTC 2200
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      TGGAAACCCTTGTAGGATGCTCTGCTGAGACGGTGAAGCTTTGACACGCTTGGAACTTCG 2260
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GATTGGAGAGTTGGACGAGATTCCTTTGCATTGGAGAGTTGTATAGTTGCTAGTATTGAA 2320
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      ATGTTGTAAGAATTCGTAGGTTGTAACATAAACAGTAAAATGAATGAAATGGTTGTTTTA 2380
consensus_11183#1      ------------------------------------------------------------
consensus_11183#2      ------------------------------------------------------------
                                                                                   

consensus_11183#0      GTATAAAAAA 2390
consensus_11183#1      ----------
consensus_11183#2      ----------