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Oryza sativa
cluster # 11192 cluster # 11192       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11192#0 length = 1506 sequences # 5  
consensus_11192#1 length = 1090 sequences # 2  
consensus_11192#2 length = 794 sequences # 1  

consensusID : consensus_11192#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1506
fasta sequence
                              [TTCCTCCTCCCCTCGGGCCGCGTCGCTCTTCCAATCCAACCCACTCCGAGCCAGATTAAGGGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCCGTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTGGGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATATGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGATTTCTGATGTTTTAGGCAGAGAGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTTGACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCAATTCTGCAGTGTACATTCATAAACGCTGTATTGTCTGAACAAATTACAGCGTCATGAAACAGTGATTCTTTGTTCCTAAAAAAAAAAA]

[+] EMBL AK066364             [TTCCTCCTCCCCTCGGGCCGCGTCGCTCTTCCAATCCAACCCACTCCGAGCCAGATTAAGGGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCCGTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTGGGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATATGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGCAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTG                                                                                                                                                                                                                                                                            ]
[+] EMBL CF326843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTT ACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCTTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAATCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCC                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB664466             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGATTTCTGATGTTTTAGGCAGAGAGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTTGACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCA                                                                                        ]
[-] EMBL CF326842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGACTTCTGATGTTTTAGGCAGAGAGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTTGACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCAATTCTGCAGTGTACATTCATAAACGCTGTATTGTCTGAACAAATTACAGCGTCATGAAACAGTGATTCTTTGTTCCTAAAAAAAAAAA]
[+] EMBL AU165015             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGACCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCCCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGATTTCTGATGTTTTAGGCAGAGAGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTTGACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCAATTCTGCAGTGTACATTCATAAACGCTGTATTGTCTGAACAAATTACAGCGTCATGAAACAGTGATTCTTTGTTCCTAAAA       ]


>consensus_11192#0 TTCCTCCTCCCCTCGGGCCGCGTCGCTCTTCCAATCCAACCCACTCCGAGCCAGATTAAG GGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTC GGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTG GCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCC GTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTG GGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATC GAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTC AAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAG ATATGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCC CTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTG CTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTA ACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAA GTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGC CATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCG GCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTC GCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGT GATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCA AGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTC TTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGC ATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACT CTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTT TGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGATTTCTGATGTTTTAGGCAGAG AGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTT GACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCAATTCTGCAGTGTACATTCATAA ACGCTGTATTGTCTGAACAAATTACAGCGTCATGAAACAGTGATTCTTTGTTCCTAAAAA AAAAAA



consensusID : consensus_11192#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1090
fasta sequence
                              [CACTCCGAGCCAGATTAAGGGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTG]

[+] EMBL AK067674             [CACTCCGAGCCAGATTAAGGGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTTTG]
[+] EMBL BI811883             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GGAACCTTTAACAAGGCTTGTTCAAGAATGTGAGCCTAATCTTGAGCTCCTGTTTCCTATCGAA CAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGAT CGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTAC ATCCCTTGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCCATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGAccaaaa                                                                        ]


>consensus_11192#1 CACTCCGAGCCAGATTAAGGGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTC CAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGC GTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAAGCTCAACGA CTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAAT TGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGA GATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAAC CTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAAC AGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACCAACCATTTTTCACAACGG AACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCG AAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATG CGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCA CACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCT TGTCGCTCGCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCT CTGAAAGTGATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGG TGCAATCAAGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAAT GATCCGTCTTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACA GCTGCGGCATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCA ATGGAACTCTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACT GTGTTCTTTG



consensusID : consensus_11192#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 794
fasta sequence
                              [TCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCCGTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTGGGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATC]

[+] EMBL CB664465             [TCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCCGTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTGGGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATC]


>consensus_11192#2 TCGAGGAATTCTGTTCCAAATCGAGTATGAAATTCGGGAAGGATTTCAGGAGCCACCTGG AGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTGGCGTACAAGTCCCTCAAGAAGCTAA TCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCCGTCGCCGCGGCGGCGGAGGTGCCTG CGGGAGATGGGGATGGGGATGGGGGCATCGCCCTGGGGAACTGGTTCGCCAGGGTCCTCG ACATGGAGCTCCAGAAGCTCAACGACTTCTACATCGAGAGGGAGGAGTGGTACGTCATCC GCCTCCAGAAAGAATTGAACGTGTCAAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAG CGAATTCACTGAAGAGATGTTAGAGATACGCAAAGCTTTTGTCATCATCCATGGGGAGAT GATTCTTCTGCAAACCTATAGCTCCCTAAATTTTGCCGGACTTGTGAAGATACTGAAAAA ATATGACAAGAGAACAGGTGGTTTGCTCAGCCTACCTTTCACTCAACGTGCTCGACACCA ACCATTTTTCACAACGGAACCTTTAACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGA GCTCCTGTTTCCTATCGAAGCAGAAGTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCA ACCTCAGAATGATGATGCGGCTAGCCATGACCCAGCGTCATCTGTCGATGTTGAAACCTC GGACGTGTACCGAAGCACACTCGCGGCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAG CTCTACTTACAATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11192#0      TTCCTCCTCCCCTCGGGCCGCGTCGCTCTTCCAATCCAACCCACTCCGAGCCAGATTAAG 60
consensus_11192#1      -----------------------------------------CACTCCGAGCCAGATTAAG 19
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      GGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTC 120
consensus_11192#1      GGAGAAGAGATTTCCTGCGAATTCTTCGAGGAATTCTGTTCCAAATCGAGTATGAAATTC 79
consensus_11192#2      -------------------------TCGAGGAATTCTGTTCCAAATCGAGTATGAAATTC 35
                                                ***********************************

consensus_11192#0      GGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTG 180
consensus_11192#1      GGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTG 139
consensus_11192#2      GGGAAGGATTTCAGGAGCCACCTGGAGGAGACGCTGCCGGCGTGGAGGGACAAGTATCTG 95
                       ************************************************************

consensus_11192#0      GCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCC 240
consensus_11192#1      GCGTACAAGTCCCTCAAGAAGCTAATCAAGAA---------------------------- 171
consensus_11192#2      GCGTACAAGTCCCTCAAGAAGCTAATCAAGAACCTGCCCCCCGATGGAGATCCCCCTCCC 155
                       ********************************                            

consensus_11192#0      GTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTG 300
consensus_11192#1      ------------------------------------------------------------
consensus_11192#2      GTCGCCGCGGCGGCGGAGGTGCCTGCGGGAGATGGGGATGGGGATGGGGGCATCGCCCTG 215
                                                                                   

consensus_11192#0      GGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATC 360
consensus_11192#1      -----------------------------------------GCTCAACGACTTCTACATC 190
consensus_11192#2      GGGAACTGGTTCGCCAGGGTCCTCGACATGGAGCTCCAGAAGCTCAACGACTTCTACATC 275
                                                                *******************

consensus_11192#0      GAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTC 420
consensus_11192#1      GAGAGGGAGGAGTGGTACGTCATCCGCCTCCAGGTGCTCAAAGAAAGAATTGAACGTGTC 250
consensus_11192#2      GAGAGGGAGGAGTGGTACGTCATCCGCCTCCAG----------AAAGAATTGAACGTGTC 325
                       *********************************          *****************

consensus_11192#0      AAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAG 480
consensus_11192#1      AAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAG 310
consensus_11192#2      AAAGCTAAGAAGAATGGGGCTTTTACATCTAAGAGCGAATTCACTGAAGAGATGTTAGAG 385
                       ************************************************************

consensus_11192#0      ATATGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCC 540
consensus_11192#1      ATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCC 370
consensus_11192#2      ATACGCAAAGCTTTTGTCATCATCCATGGGGAGATGATTCTTCTGCAAACCTATAGCTCC 445
                       *** ********************************************************

consensus_11192#0      CTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTG 600
consensus_11192#1      CTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTG 430
consensus_11192#2      CTAAATTTTGCCGGACTTGTGAAGATACTGAAAAAATATGACAAGAGAACAGGTGGTTTG 505
                       ************************************************************

consensus_11192#0      CTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTA 660
consensus_11192#1      CTCAGCCTACCTTTCACTCAACGTGCTCGAC--CAACCATTTTTCACAACGGAACCTTTA 488
consensus_11192#2      CTCAGCCTACCTTTCACTCAACGTGCTCGACACCAACCATTTTTCACAACGGAACCTTTA 565
                       *******************************  ***************************

consensus_11192#0      ACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAA 720
consensus_11192#1      ACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAA 548
consensus_11192#2      ACAAGGCTTGTTCGAGAATGTGAGGCTAATCTTGAGCTCCTGTTTCCTATCGAAGCAGAA 625
                       ************************************************************

consensus_11192#0      GTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGC 780
consensus_11192#1      GTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGC 608
consensus_11192#2      GTACTTGAGTCTGCTAGCTCCTCTGCTAAGTTGCAACCTCAGAATGATGATGCGGCTAGC 685
                       ************************************************************

consensus_11192#0      CATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCG 840
consensus_11192#1      CATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCG 668
consensus_11192#2      CATGACCCAGCGTCATCTGTCGATGTTGAAACCTCGGACGTGTACCGAAGCACACTCGCG 745
                       ************************************************************

consensus_11192#0      GCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTC 900
consensus_11192#1      GCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATCCCTTGTCGCTC 728
consensus_11192#2      GCAATGAAGGCGATTCAGGGCCTCCGCAAAGCCAGCTCTACTTACAATC----------- 794
                       *************************************************           

consensus_11192#0      GCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGT 960
consensus_11192#1      GCCAGGTTCTTCCATGGAGAGGACGGTGAAGCCTGCTCTGGAGCCATCACCTCTGAAAGT 788
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      GATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCA 1020
consensus_11192#1      GATTCCTATTCTGATTCCCAGATTGAAGATGCTGAAGATGATGATAAAGAGGTGCAATCA 848
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      AGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTC 1080
consensus_11192#1      AGGGAGCAGAATACGGCTCAAAATGCTGCAGAAGGCCAGCCACGTGATGAATGATCCGTC 908
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      TTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGC 1140
consensus_11192#1      TTTGCATTGTGCTGTTTAATCCTCCGAGGCCCTGATAAGTGTAAATGATACAGCTGCGGC 968
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      ATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACT 1200
consensus_11192#1      ATACACTAATAATCTTGATCCTTGAAATGTATAACCATTACTGATCTTCCCAATGGAACT 1028
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      CTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTT 1260
consensus_11192#1      CTTTTCCTTTTTCTTTTCGCTCGTAGATATCAAAGTTGGATTTATATTTACTGTGTTCTT 1088
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      TGGTTTGACAGCATATTATCAGGATTTTGGAGTTCTGGATTTCTGATGTTTTAGGCAGAG 1320
consensus_11192#1      TG---------------------------------------------------------- 1090
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      AGCAAATGTGAGTTATTAGCTGACTTGGGTGAACTTTATGCAAACCCCCAGTAGCATTTT 1380
consensus_11192#1      ------------------------------------------------------------
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      GACATATTCTTTGTACAAAGAAAGCCACAAAGCTCCCAATTCTGCAGTGTACATTCATAA 1440
consensus_11192#1      ------------------------------------------------------------
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      ACGCTGTATTGTCTGAACAAATTACAGCGTCATGAAACAGTGATTCTTTGTTCCTAAAAA 1500
consensus_11192#1      ------------------------------------------------------------
consensus_11192#2      ------------------------------------------------------------
                                                                                   

consensus_11192#0      AAAAAA 1506
consensus_11192#1      ------
consensus_11192#2      ------
                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)