These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11213#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1573 fasta sequence [AAGCCAAAGCAAACCGAAGCCCAGTTTCTCTCTCCTCCTCCTCTTCCTCCTCGCATCAGTCCGCATAAAGTCTCCTCCCCTTCCCCCTCCTCCTCCTCCTCTCCAATCTTGGCAGCAGCAGCAGCAAAGGGGCGGTGGGTTCTTTGTCTCTCTCTCTCGGGCGGATTTCGGTTTCTTCGTGTGTTTGTTGGTTGCGTTGGCGTTTGGAGCGGCGGCGGTGGCGGTGAGTGTGAGTGGTGAGGAGGAGGAGGCCGCCATGGGCGCGGGCGGGAGGTGGGTGGAGGAGTACGGGCGTTCGTCGTCGCCGTCGTCCAACCTGCAGTGCTTCTTGGACTGCACCACCCCCGCCGTCGACACGCACCTCCTCCCCAAGGCGAATGGCCGGTTTTCGAGCGATTCTTGGCACCACGCCGAGATGGACAGCGTCGAGTACTTCAACCTCGCGGACCTATGGGAGCAGTACTATGAGTGGAGCGCGTACGGGGCTGGAACTACGGTGCAGCTGTATGGAGGGGAAAGAGTAGTCCAATACTATGTTCCCTACTTGTCAGGGATACAGCTATATACCAACAAAGCCCAGACTGCATCCAGGAGTTTTGGTGAAGATAATGGCATGGACTATTGGAGCGATGATGAGGACAATGAGAAGATGTCAAGATCTTGGAGTTCAACATCTGAAGACTCATTATTTAACTGTGATGCAATAAGTGGCAATAGAAAACGCCACGGGCACATGTATTTTGAGTTCTTCGAGGTTTGCTCTCCTTATGGAAGGATTCCACTCATTGACAAGGTGTATGAACTATCCCAGAGCTATCCTGGGTTGACATCCCTGAGAAGTGTTGACCTTTCGCCTGCTAGTTGGATGTCAGTTGCCTGGTATCCCATCTACCATATTCCCTACCAGCGCAATGTGAAGGACTTATCTGCATGCTTCCTAACTTATCATACCATTTCCTCTTCATTTCAAGATTACGCGCTCGAGAGCATGGCCAACGGGAAGCGAAACGACGAGACGGAGAAGAAGGTCAGCAAGACTCATCTTGCTCCGTTCGGGCTCGCGGCGCACAAGCTGCAGGGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTCTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCACCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATTTTGATATCCAATATATGTCGTGGTTGGAATTGGATTCAAAAAAAAAAAAAAAA] [+] EMBL AK106067 [AAGCCAAAGCAAACCGAAGCCCAGTTTCTCTCTCCTCCTCCTCTTCCTCCTCGCATCAGTCCGCATAAAGTCTCCTCCCCTTCCCCCTCCTCCTCCTCCTCTCCAATCTTGGCAGCAGCAGCAGCAAAGGGGCGGTGGGTTCTTTGTCTCTCTCTCTCGGGCGGATTTCGGTTTCTTCGTGTGTTTGTTGGTTGCGTTGGCGTTTGGAGCGGCGGCGGTGGCGGTGAGTGTGAGTGGTGAGGAGGAGGAGGCCGCCATGGGCGCGGGCGGGAGGTGGGTGGAGGAGTACGGGCGTTCGTCGTCGCCGTCGTCCAACCTGCAGTGCTTCTTGGACTGCACCACCCCCGCCGTCGACACGCACCTCCTCCCCAAGGCGAATGGCCGGTTTTCGAGCGATTCTTGGCACCACGCCGAGATGGACAGCGTCGAGTACTTCAACCTCGCGGACCTATGGGAGCAGTACTATGAGTGGAGCGCGTACGGGGCTGGAACTACGGTGCAGCTGTATGGAGGGGAAAGAGTAGTCCAATACTATGTTCCCTACTTGTCAGGGATACAGCTATATACCAACAAAGCCCAGACTGCATCCAGGAGTTTTGGTGAAGATAATGGCATGGACTATTGGAGCGATGATGAGGACAATGAGAAGATGTCAAGATCTTGGAGTTCAACATCTGAAGACTCATTATTTAACTGTGATGCAATAAGTGGCAATAGAAAACGCCACGGGCACATGTATTTTGAGTTCTTCGAGGTTTGCTCTCCTTATGGAAGGATTCCACTCATTGACAAGGTGTATGAACTATCCCAGAGCTATCCTGGGTTGACATCCCTGAGAAGTGTTGACCTTTCGCCTGCTAGTTGGATGTCAGTTGCCTGGTATCCCATCTACCATATTCCCTACCAGCGCAATGTGAAGGACTTATCTGCATGCTTCCTAACTTATCATACCATTTCCTCTTCATTTCAAGATTACGCGCTCGAGAGCATGGCCAACGGGAAGCGAAACGACGAGACGGAGAAGAAGGTCAGCAAGACTCATCTTGCTCCGTTCGGGCTCGCGGCGCACAAGCTGCAGGGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTCTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCACCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATTTTGATATCCAATATATGTCGTGGTTGG ] [+] EMBL AK071373 [ AAGCAAACCGAAGCCCAGTTTCTCTCTCCTCCTCCTCTTCCTCCTCGCATCAGTCCGCATAAAGTCTCCTCCCCTTCCCCCTCCTCCTCCTCCTCTCCAATCTTGGCAGCAGCAGCAGCAAAGGGGCGGTGGGTTCTTTGTCTCTCTCTCTCGGGCGGATTTCGGTTTCTTCGTGTGTTTGTTGGTTGCGTTGGCGTTTGGAGCGGCGGCGGTGGCGGTGAGTGTGAGTGGTGAGGAGGAGGAGGCCGCCATGGGCGCGGGCGGGAGGTGGGTGGAGGAGTACGGGCGTTCGTCGTCGCCGTCGTCCAACCTGCAGTGCTTCTTGGACTGCACCACCCCCGCCGTCGACACGCACCTCCTCCCCAAGGCGAATGGCCGGTTTTCGAGCGATTCTTGGCACCACGCCGAGATGGACAGCGTCGAGTACTTCAACCTCGCGGACCTATGGGAGCAGTACTATGAGTGGAGCGCGTACGGGGCTGGAACTACGGTGCAGCTGTATGGAGGGGAAAGAGTAGTCCAATACTATGTTCCCTACTTGTCAGGGATACAGCTATATACCAACAAAGCCCAGACTGCATCCAGGAGTTTTGGTGAAGATAATGGCATGGACTATTGGAGCGATGATGAGGACAATGAGAAGATGTCAAGATCTTGGAGTTCAACATCTGAAGACTCATTATTTAACTGTGATGCAATAAGTGGCAATAGAAAACGCCACGGGCACATGTATTTTGAGTTCTTCGAGGTTTGCTCTCCTTATGGAAGGATTCCACTCATTGACAAGGTGTATGAACTATCCCAGAGCTATCCTGGGTTGACATCCCTGAGAAGTGTTGACCTTTCGCCTGCTAGTTGGATGTCAGTTGCCTGGTATCCCATCTACCATATTCCCTACCAGCGCAATGTGAAGGACTTATCTGCATGCTTCCTAACTTATCATACCATTTCCTCTTCATTTCAAGATTACGCGCTCGAGAGCATGGCCAACGGGAAGCGAAACGACGAGACGGAGAAGAAGGTCAGCAAGACTCATCTTGCTCCGTTCGGGCTCGCGGCGCACAAGCTGCAGGGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTCTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCACCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATTTTGATATCCAATATATGTCGTGGTTGG ] [+] EMBL C28462 [ AGTACGGGCGTTCGTCGTCGCCGTCGTCCAACCTGCAGTGCTTCTTGGACTGCACCACCCCCGCCGTCGACACGCACCTCCTCCCCAAGGCGAATGGCCGGTTTTCGAGCGATTCTTGGCACCACGCCGAGATGGACAGCGTCGAGTACTTCAACCTCGCGGACCTATGGGAGCAGTACTATGAGTGGAGCGCGTACGGGGCTGGAACTACGGTGCAGCTGTATGGAGGGGAAANAGTAGTCCAATACTATGTTCCCTACTTGTCAGGGATACAGCTATATACCAACAAAGCCCAGACTGCATCCAGGAGTTTTGGTGAAGATAATGGCATGGACTATTGGAGCGATGATGAGGACAATGAGAAGATGTCAAGATCTTGGAGTTCAACATCTGAAGNCTCATTATTTAACTGTGATGCAATAAGTGGCAATAG AAACGCCACG ] [+] EMBL CB655154 [ ttTGCTTCTTGGACTGCACCACCCCCGCCGTCGACACGCACCTCCTCCCCAAGGCGAATGGCCGGTTTTCGAGCGATTCTTGGCACCACGCCGAGATGGACAGCGTCGAGTACTTCAACCTCGCGGACCTATGGGAGCAGTACTATGAGTGGAGCGCGTACGGGGCTGGAACTACGGTGCAGCTGTATGGAGGGGAAAGAGTAGTCCAATACTATGTTCCCTACTTGTCAGGGATACCGCTATATACCAACCAAGCCCAGACTGCATCCAGGAGTTTTGGTGAAGATAATGGCATGGACTATTGGAGCGATGATGAGGACAATGATAAGATGTCAAGATCTTGGAGTTCAACATCTGAAGACTCATTATTTAACTGTGATGCCATAAGTGGCAATAGAAAACGCCACGGGCACATGTATTTTGAGTTCTTCGAGGTTTGCTCTCCTTATGGAAGGATTCCACTCATTGACCAGGTGTATGAACTATCCCACAGCTATCCTGGGTTGCCATCCCCGAGAAGTG ] [-] EMBL CB659628 [ CTTCGAGGTTTGCTCTCCTTATGGAAGGATTCCACTCATTGACAAGGTGTATGAACTATCCCAGAGCTATCCTGGGTTGACATCCCTGAGAAGTGTTGACCTTTCGCCTGCTAGTTGGATGTCAGTTGCCTGGTATCCCATCTACCATATTCCCTACCAGCGCAATGTGAAGGACTTATCTGCATGCTTCCTAACTTATCATACCATTTCCTCTTCATTTCAAGATTACGCGCTCGAGAGCATGGCCAACGGGAAGCGAAACGACGAGACGGAGAAGAAGGTCAGCAAGACTCATCTTGCTCCGTTCGGGCTCGCGGCGCACAAGCTGCAGGGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTCTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCACCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATATGGATATCCAATATATGTCGTGGTTGGAATTGGAT ] [-] EMBL CB655155 [ TATCCCATCTACCATATTCCCTACCAGCGCAATGTGAAGGACTTATCTGCATGCTTCCTAACTTATCATACCATTTCCTCTTCATTTCAAGATTACGCGCTCGAGAGCATGGCCAACGGGAAGCGAAACGACGAGACGGAGAAGAAGGTCAGCAAGACTCATCTTGCTCCGTTCGGGCTCGCGGCGCACAAGCTGCAGGGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTCTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCACCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATTTTGATATCCAATAAAGGTCGTGGTTGGAA ] [+] EMBL AU092966 [ GGTTCTCTCTGGACCAACCCGAGAACAGGGGACCGTGACAGGATGGTCTCCCTNTTCGGCGCCGCGGATTCCTGGCTCAAGCAGCTCGGAGTCCAGCNCCATGACTACAACTACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTTGCAAAGAAACCCCATGGCTGCAGACTTTGGAGAGGAGGCATCAGATTTTTACTTACCCCAGCGACAATGGTAGCAAACGTTTTACCGTTTTGTCAAAATGACACTGACATTTGCCGGATAGAGTTTTATACCGCTTGAGACTTGAGACTTGAGAGTTTACCTGCAGCTGAATATATACCGAATATATCAGGACTTATAGGTTTTGTGTTTTTCTTGGCTGAAGATGTAAACCGACCGTGTACAGAAAGTTTTGGAACTATTTTGATATCCAATATATGTCGTGGTTGGAATTGGATTCAAAAAAAAAAAAAAAA] [+] EMBL CF325489 [ TACTTCATCACTCACCCCATGTGATCTGAACAGCTGATCTGTGTCATCTGAGAAGAGTAGGTTGCAACTT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||