These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1746 fasta sequence [CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT] [+] EMBL AK101851 [CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTG AACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGAT ] [+] EMBL CB667268 [ CAGCTCCCTCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAG ] [-] EMBL CB618240 [ TCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTGCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATATGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAAGAGTGACAGGGGATGTTTGGGCGCACGCCGAATAttaaaagga ] [-] EMBL CB667269 [ TAGCATGGGATGGTGAGGGTGCAACATGTTTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCACCCACTCCCATTTGACAGATTTGCGGCCAGCAAGTTTTTGAAAGATGCTGGAGACATCCATGGTCCAGTGACCATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTTTTACCCTGTTTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGTTAGGCATTTGAGCGATTTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTTTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTTTGCCATCCCATTTGATTCAATTTTAATTTATAACAGTGCCAGGGGATGTTTGGGCGCCCCCCGAATAAAGTTTGTATT ] [+] EMBL CB096436 [ TAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGGGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT] consensusID : consensus_11216#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1367 fasta sequence [GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA] [+] EMBL AK106253 [GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA] consensusID : consensus_11216#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 812 fasta sequence [TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA] [+] EMBL CB618239 [TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA] consensusID : consensus_11216#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 803 fasta sequence [GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA] [+] EMBL CA767223 [GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11216#0 CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGC 60 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 CACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCAC 120 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGAT 180 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCC 240 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTA 300 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 CGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGA 360 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 CGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTG 420 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 TAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGC 480 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 AAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGC 540 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 CAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCA 600 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTC 660 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAA 720 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA 780 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ------------------------------------------------------------ consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 AGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGC 840 consensus_11216#3 ---------------------GAGGACGA-GACAAGGGG-GGTGTTTTAACAACTGACGC 37 consensus_11216#1 ----------------------------------------------------GCCCGCTC 8 consensus_11216#2 ----------------------------TTCCTCTTTCCCTCTATATTCCTCACCATCAC 32 * * * consensus_11216#0 TCAAGTCAGCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 897 consensus_11216#3 TCAAGTC-GCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 93 consensus_11216#1 CCACGCT-GT-GTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 66 consensus_11216#2 AAAAGTT-ACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 91 * * ** * * * * * * ** * * ** consensus_11216#0 CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 957 consensus_11216#3 CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 153 consensus_11216#1 CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 123 consensus_11216#2 CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 148 * * * ** * ** *** * ** * * * * *** * * consensus_11216#0 TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 1016 consensus_11216#3 TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 212 consensus_11216#1 GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 181 consensus_11216#2 GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 206 *** * *** * * * *** * * ** *** * * * consensus_11216#0 AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 1076 consensus_11216#3 AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 272 consensus_11216#1 CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 233 consensus_11216#2 CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 258 ** *** * * ** * * ** ** *** ** * * * consensus_11216#0 GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 1136 consensus_11216#3 GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 332 consensus_11216#1 CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 291 consensus_11216#2 CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 316 * * * * * * ** * ** * ** * * * * *** * * * consensus_11216#0 AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 1194 consensus_11216#3 AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 390 consensus_11216#1 AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 351 consensus_11216#2 AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 376 * ** ** ** *** *** * ** * ** ** * * * * consensus_11216#0 CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 1253 consensus_11216#3 CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 449 consensus_11216#1 TC---GCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 408 consensus_11216#2 TC---GCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 433 * * * **** ** * * ** ** * * *** *** * consensus_11216#0 ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 1313 consensus_11216#3 ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 509 consensus_11216#1 --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGT 466 consensus_11216#2 --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGT 491 * ** * *** ** * * * **** * ** * * * consensus_11216#0 -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 1371 consensus_11216#3 -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 567 consensus_11216#1 GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 526 consensus_11216#2 GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 551 ** * ** * * ***** * ** ** ** ** ** ** * ****** consensus_11216#0 GAACATTGATGTATCAGTTGGGAGGGGAG--GA-GGAAGTGG-AAAGGCCTGGGG-CTGT 1426 consensus_11216#3 GAACATTGATGTATCAGTTGGGAGGGGAG--GAAGGAAGTGGGAAAGGCCTGGGGGCTGT 625 consensus_11216#1 GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 586 consensus_11216#2 GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 611 * * * ** ** * **** * * * * ** ** * * * * consensus_11216#0 GATTTAAGTTATAAGTATGTCGAGA-TAAATGC-GGAATACACGACGTG-AAAGTCTTAC 1483 consensus_11216#3 GATTTAAGNTATAAGTATGTCGAGA-TAAATGCCGGAATACACGACGGGGAAAGTCTTAC 684 consensus_11216#1 GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 646 consensus_11216#2 GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 671 * * * * * * **** **** * ** * * ** ** consensus_11216#0 ACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAG 1543 consensus_11216#3 ACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAG 744 consensus_11216#1 ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 703 consensus_11216#2 ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 728 *** * * * ** **** * ** ** ** * * * ** ** * consensus_11216#0 -GCATCTGAGCGATCTGTATCATATTGAGACTCGCCC-TTTGTTGTATCAATCGGCTGAA 1601 consensus_11216#3 -GCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA 803 consensus_11216#1 TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 759 consensus_11216#2 TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 784 ** ** * * * * * *** *** * * ** ** ** consensus_11216#0 CGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAG 1661 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 TGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAA 819 consensus_11216#2 TGCCTATCAAAATAGGAGGAATGGCCAA-------------------------------- 812 consensus_11216#0 CTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGC 1721 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 CAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGG 879 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 GCACGCCGAATAAAGTTTGTATTTT----------------------------------- 1746 consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 TCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCA 939 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATG 999 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 ATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAA 1059 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 AATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTG 1119 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 CCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTA 1179 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 AAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTG 1239 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 TCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTT 1299 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 ------------------------------------------------------------ consensus_11216#3 ------------------------------------------------------------ consensus_11216#1 GGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTT 1359 consensus_11216#2 ------------------------------------------------------------ consensus_11216#0 -------- consensus_11216#3 -------- consensus_11216#1 GATGCGGA 1367 consensus_11216#2 -------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||