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Oryza sativa
cluster # 11216 cluster # 11216       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11216#0 length = 1746 sequences # 5  
consensus_11216#1 length = 1367 sequences # 1  
consensus_11216#2 length = 812 sequences # 1  
consensus_11216#3 length = 803 sequences # 1  

consensusID : consensus_11216#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1746
fasta sequence
                              [CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT]

[+] EMBL AK101851             [CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTG AACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGAT                                 ]
[+] EMBL CB667268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                              CAGCTCCCTCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CB618240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTGCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATATGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAAGAGTGACAGGGGATGTTTGGGCGCACGCCGAATAttaaaagga    ]
[-] EMBL CB667269             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TAGCATGGGATGGTGAGGGTGCAACATGTTTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCACCCACTCCCATTTGACAGATTTGCGGCCAGCAAGTTTTTGAAAGATGCTGGAGACATCCATGGTCCAGTGACCATTGATGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTTTTACCCTGTTTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGTTAGGCATTTGAGCGATTTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTTTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTTTGCCATCCCATTTGATTCAATTTTAATTTATAACAGTGCCAGGGGATGTTTGGGCGCCCCCCGAATAAAGTTTGTATT  ]
[+] EMBL CB096436             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TAAGTTATAAGTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGGGCGATCTGTATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTGTATTTT]


>consensus_11216#0 CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGC CACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCAC GCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGAT GGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCC GTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTA CGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGA CGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTG TAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGC AAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGC CAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCA GAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTC ATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAA GAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA AGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGC TCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAA TCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGG GTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGC ATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGC AACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAAT TGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAA CTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCT TGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAG ATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGA TGTATCAGTTGGGAGGGGAGGAGGAAGTGGAAAGGCCTGGGGCTGTGATTTAAGTTATAA GTATGTCGAGATAAATGCGGAATACACGACGTGAAAGTCTTACACTGTCTATGAAGAACG GTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAGGCATCTGAGCGATCTGT ATCATATTGAGACTCGCCCTTTGTTGTATCAATCGGCTGAACGTGCATTCTTTTGTAAGT GTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAGCTGTCTGCCATGCCATCTG ATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGCGCACGCCGAATAAAGTTTG TATTTT



consensusID : consensus_11216#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1367
fasta sequence
                              [GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA]

[+] EMBL AK106253             [GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA]


>consensus_11216#1 GCCCGCTCCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGC CGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATC CACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCAT CCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCG ACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGG GTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCG ACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTT TGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTG GACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATG CTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTA TTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCAC TGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTG TTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAA TGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAA CTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAA GCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGG CTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGT TCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTG AGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAG CTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGTATGATACTGTTTAGCAG CAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTGTCATTCGTTAGCCCAGAAAGC CTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTTGGAAGAGACCCAAACTGGGGA CGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGA



consensusID : consensus_11216#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 812
fasta sequence
                              [TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA]

[+] EMBL CB618239             [TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA]


>consensus_11216#2 TTCCTCTTTCCCTCTATATTCCTCACCATCACAAAAGTTACCGTCACACCCACCTGCCAC CTCGCCGCGACGACCCCCTCGCCGCCGGCCGCCACCGCGCGTCAACTGCCGGCGATGCCG CCCCCTTCCCTCCTGCTCCTCCATCCACGCACGCCGCTGCCGCACCACCACCGCTCCTCC TTCCGGACGAGCTCTCCGCGGCCATCCAGGATGGTCTGCGCCGCTGCCGAGGGGTTTATC TCCGCGGCGCCGATCCTCCTCCCCGACGGCCCGTGGAAGCAGGTGGAAGGCGGCGTCACG GCGGCGAAGGGGTTCAAGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAG CCCGACCTTGCGCTGGTCGCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACG AATGTTGTTGCTGCTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACA GCTCGAGCTGTGTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATAT CAGGATACAGTGGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGAC ATACTGATCCAGTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAAT TCACTTCATAGACTTGTGGGCTCACTGTCTTCATCCATTGAGGGTGCAAATTCTGCAGCT GTGGCCATTACAACTACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGAGATTGGA GGAGTGCCTATCAAAATAGGAGGAATGGCCAA



consensusID : consensus_11216#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 803
fasta sequence
                              [GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA]

[+] EMBL CA767223             [GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAGAGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAAAGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAGGAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGGAATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA]


>consensus_11216#3 GAGGACGAGACAAGGGGGGTGTTTTAACAACTGACGCTCAAGTCGCAGTGATGTTTGGAG AGAAATGGTCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATAC GAGTACCAATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCT TACTCATGATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGG TCTTGCAAAATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGT AGCTGGTGCCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTC CCTGGTTAAAGCCGCTGTATTTGGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGT CGGTTATTCAGGCATTCAGTTTGATGCGGACCAGCTTGATATTTCCCTTGGAGCTATTCC ACTAATGAAAAATGGTCAACCACTCCCATTTGACAGATCTGCGGCCAGCAAGTATCTGAA AGATGCTGGAGACATCCATGGTACAGTGAACATTGATGTATCAGTTGGGAGGGGAGGAAG GAAGTGGGAAAGGCCTGGGGGCTGTGATTTAAGNTATAAGTATGTCGAGATAAATGCCGG AATACACGACGGGGAAAGTCTTACACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAAT GGAACGCTGNTCGGATGCAGCTAGGCATCTGAGCGATCTGTATCATATTGAGACTCGNCC CTTTGNTGGATCAATCGGCTGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11216#0      CCCACGCTGTGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCGC 60
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      CACCGCGCGTCAACTGCCGGCGATGCCGCCCCCTTCCCTCCTGCTCCTCCATCCACGCAC 120
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GCCGCTGCCGCACCACCACCGCTCCTCCTTCCGGACGAGCTCTCCGCGGCCATCCAGGAT 180
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GGTCTGCGCCGCTGCCGAGGGGTTTATCTCCGCGGCGCCGATCCTCCTCCCCGACGGCCC 240
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GTGGAAGCAGGTGGAAGGCGGCGTCACGGCGGCGAAGGGGTTCAAGGCGGCGGGTATCTA 300
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      CGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGGTCGCCTGCGACGTCGA 360
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      CGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTGCTGCACCAGTTTTGTACTG 420
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      TAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGTGTTAATTAATGCTGGACAAGC 480
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      AAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGTGGATAGTGCTGATGCTGTTGC 540
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      CAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCAGTCCACTGGTGTTATTGGTCA 600
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAGACTTGTGGGCTCACTGTCTTC 660
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ATCCATTGAGGGTGCAAATTCTGCAGCTGTGGCCATTACAACTACAGACCTTGTTAGCAA 720
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GAGCATCGCTGTACAGACAGAGATTGGAGGAGTGCCTATCAAAATAGGAGGAATGGCCAA 780
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ------------------------------------------------------------
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      AGGTTCTGGGATGATTCATCCAAATATGGCAACAATGCTTGGTGTTTTAACAACTGACGC 840
consensus_11216#3      ---------------------GAGGACGA-GACAAGGGG-GGTGTTTTAACAACTGACGC 37
consensus_11216#1      ----------------------------------------------------GCCCGCTC 8
consensus_11216#2      ----------------------------TTCCTCTTTCCCTCTATATTCCTCACCATCAC 32
                                                                            *   * *

consensus_11216#0      TCAAGTCAGCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 897
consensus_11216#3      TCAAGTC-GCAGTGATGTTTGGA-GAGAAATGGTCCGAACA--TCAGTGAGTAGAAGCTT 93
consensus_11216#1      CCACGCT-GT-GTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 66
consensus_11216#2      AAAAGTT-ACCGTCACACCCACCTGCCACCTCGCCGCGACGACCCCCTCGCCGCCGGCCG 91
                         * *      ** *         *  *  * * *   **    *  *        **  

consensus_11216#0      CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 957
consensus_11216#3      CAATCAAATAACAGTGGATGGTGATACGAGTACCAATGACTGTGTTATTGCTCTGGCTAG 153
consensus_11216#1      CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 123
consensus_11216#2      CCACCGCGCGTCAACTGCCGGCGATGC---CGCCCCCTTCCCTCCTGCTCCTCCATCCAC 148
                       * * *      **   *  ** *** *     **     *  *  *  * ***   * * 

consensus_11216#0      TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 1016
consensus_11216#3      TGGGTTATCTGGTTTATCCAGTATCCTTACTCATGATAGCACTGAAGCTCAACAGTT-CC 212
consensus_11216#1      GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 181
consensus_11216#2      GCACGCCGCTGCCGCA-CCACCACCGCTCCTCCTTCCGG-ACGAGCTCTCCGCGGCCATC 206
                               ***    * ***  * *  * *** *    * **     ***  * *    *

consensus_11216#0      AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 1076
consensus_11216#3      AAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAAAATCCATAGCATGGGATGGTGAGG 272
consensus_11216#1      CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 233
consensus_11216#2      CAGGATGGTCTG-CGCCGCTGCCGAGGGGTTTAT---CTCCGCGGC----GCCGATCCTC 258
                        ** *** *  *  ** *      * **  **      ***   **    *  * *    

consensus_11216#0      GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 1136
consensus_11216#3      GTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTGCCAATAATGAGGCTGAAGCAGCTA 332
consensus_11216#1      CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 291
consensus_11216#2      CTCCCCGACGGCCCGTGGAAGCAGGTGGAA--GGCGGCGTCACGGCGGCGAAGGGGTTCA 316
                        * *   * * *   * ** *    ** *   ** * *   *  * ***  * *     *

consensus_11216#0      AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 1194
consensus_11216#3      AAATTGCTCGT-TCAGTGGCA-TCTTCCTCCCTGGTTAAAGCCGCTGTATTTGGAAGAGA 390
consensus_11216#1      AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 351
consensus_11216#2      AGGCGGCGGGTATCTACGGCGGTCTGCGCGCCAAGGGCGAGAAGCCCGACCTTGCGCTGG 376
                       *    **  ** **   ***  *** *   **  *    **  **   *  * *    * 

consensus_11216#0      CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 1253
consensus_11216#3      CCCAAACTGGGGACGT-ATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTTGATGCGG 449
consensus_11216#1      TC---GCCTGCGACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 408
consensus_11216#2      TC---GCCTGCAACGTCGACGCCACTGTCGCGGGAGCTTTTACTACGAATGTTGTTGCTG 433
                        *    *  *  ****    **   *   *  **   **     *   *  *** *** *

consensus_11216#0      ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 1313
consensus_11216#3      ACCAGCTTGATATTTCCCTTGGAGCTATTCCACTAATGAAAAATGGTCAACCACTCCCAT 509
consensus_11216#1      --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCATCAAAAACAGCTCGAGCTGT 466
consensus_11216#2      --CTGCACCAGTTTTGTACTGTAAGCGTGTCCTTAATTCTTCAAAAACAGCTCGAGCTGT 491
                         * **   *  ***    ** *    *  *  ****     *    ** *     *  *

consensus_11216#0      -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 1371
consensus_11216#3      -TTGACAGATCTGCGGCCAGCAAGTATCTGAA-AGATGCTGGAGACATCCATGGTACAGT 567
consensus_11216#1      GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 526
consensus_11216#2      GTTAATTAATGCTGGACAAGCAAATGCAGCAACAGGTGATGCAGGATATCAGGATACAGT 551
                        ** *   **    * * ***** *     ** ** ** ** **     ** * ******

consensus_11216#0      GAACATTGATGTATCAGTTGGGAGGGGAG--GA-GGAAGTGG-AAAGGCCTGGGG-CTGT 1426
consensus_11216#3      GAACATTGATGTATCAGTTGGGAGGGGAG--GAAGGAAGTGGGAAAGGCCTGGGGGCTGT 625
consensus_11216#1      GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 586
consensus_11216#2      GGATAGTGCTGATGCTGTTGCCAAGCTTCTTAATGTGAGCACAAATGACATACTGATCCA 611
                       * * * ** **   * ****  * *       * *  **    ** * * *   *     

consensus_11216#0      GATTTAAGTTATAAGTATGTCGAGA-TAAATGC-GGAATACACGACGTG-AAAGTCTTAC 1483
consensus_11216#3      GATTTAAGNTATAAGTATGTCGAGA-TAAATGCCGGAATACACGACGGGGAAAGTCTTAC 684
consensus_11216#1      GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 646
consensus_11216#2      GTCCACTGGTGTTATTGGTCAGAGAATAAAGAAGGAGGCACTTGTAAATTCACTTCATAG 671
                       *      * * * * *     **** ****    *    **  *       *  ** ** 

consensus_11216#0      ACTGTCTATGAAGAACGGTCTCCGCTTGATGGAAATGGAACGCTGTTCGGATGCAGCTAG 1543
consensus_11216#3      ACTGTCTATGAAAAACGGTCTNCGCTTGATGGAAATGGAACGCTGNTCGGATGCAGCTAG 744
consensus_11216#1      ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 703
consensus_11216#2      ACT-TGTG-GGCTCACTGTCTTCATCCATTGAGGGTGCAA-ATTCTGCAGCTGTGGCCAT 728
                       *** * *  *    ** **** *      **    ** **   *   * * **  ** * 

consensus_11216#0      -GCATCTGAGCGATCTGTATCATATTGAGACTCGCCC-TTTGTTGTATCAATCGGCTGAA 1601
consensus_11216#3      -GCATCTGAGCGATCTGTATCATATTGAGACTCGNCCCTTTGNTGGATCAATCGGCTGAA 803
consensus_11216#1      TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 759
consensus_11216#2      TACAACT--ACAGACCTTGTTAGCAAGAGCATCGCTGTACAGACAGA--GATTGGAGGAG 784
                         ** **   *   *  * * *    ***  ***       *    *   ** **  ** 

consensus_11216#0      CGTGCATTCTTTTGTAAGTGTAAGGAATGCGCTATACAATGTTACGGCACAATAAGTAAG 1661
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      TGCCTATCAAAATAGGAGGAATGGCCAAAGGTTCTGGGATGATTCATCCAAATATGGCAA 819
consensus_11216#2      TGCCTATCAAAATAGGAGGAATGGCCAA-------------------------------- 812
                                                                                   

consensus_11216#0      CTGTCTGCCATGCCATCTGATTCAATTCTAATTTATAACAGTGACAGGGGATGTTTGGGC 1721
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      CAATGCTTGGTGTTTTAACAACTGACGCTCAAGTCAGCAGTGATGTTTGGAGAGAAATGG 879
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      GCACGCCGAATAAAGTTTGTATTTT----------------------------------- 1746
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      TCCGAACATCAGTGAGTAGAAGCTTCAATCAAATAACAGTGGATGGTGATACGAGTACCA 939
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ATGACTGTGTTATTGCTCTGGCTAGTGGGTTATCTGGTTTATCCAGTATCCTTACTCATG 999
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      ATAGCACTGAAGCTCAACAGTTCCAAGCATGCTTAGATGCTGTAATGCAAGGTCTTGCAA 1059
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      AATCCATAGCATGGGATGGTGAGGGTGCAACATGTCTAATTGAGGTTACTGTAGCTGGTG 1119
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      CCAATAATGAGGCTGAAGCAGCTAAAATTGCTCGTTCAGTGGCATCTTCCTCCCTGGTTA 1179
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      AAGTATGATACTGTTTAGCAGCAAAATTTTGCTAATTAGGAGAGGATTGACACCCCTCTG 1239
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      TCATTCGTTAGCCCAGAAAGCCTGAGTTGTTAAATTATTTTTTATCAGGCCGCTGTATTT 1299
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      ------------------------------------------------------------
consensus_11216#3      ------------------------------------------------------------
consensus_11216#1      GGAAGAGACCCAAACTGGGGACGTATTGCTTGTTCTGTCGGTTATTCAGGCATTCAGTTT 1359
consensus_11216#2      ------------------------------------------------------------
                                                                                   

consensus_11216#0      --------
consensus_11216#3      --------
consensus_11216#1      GATGCGGA 1367
consensus_11216#2      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)