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Oryza sativa
cluster # 11225 cluster # 11225       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11225#0 length = 1915 sequences # 4  
consensus_11225#1 length = 608 sequences # 2  
consensus_11225#2 length = 272 sequences # 1  
consensus_11225#3 length = 118 sequences # 1  

consensusID : consensus_11225#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1915
fasta sequence
                              [CCAAGACGTCGTAGGCAACACCTCCCTTCCCCCCTACCCTTGAACCGAGGCCGAGTCGTGGTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGCAGCAGGAGGAGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACAGCCTTGGGAGTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTAGGGAAGGGGCGGTGCCGGAGCCCGCGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATTTTTTCAGAGGATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAATGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGCGCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGGGCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAGCATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCAGCTCGCAATATACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGCAACTGAAATGATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACAATCATTGCTTGGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGCGGTATTGTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAACTCAGGTTTACTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCACGCATTCAGAAGTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTATTATGCTTGTGGCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTATAGTCCAATTGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGGCATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTATTCTTTCTGAATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGTGGCTTTTATCAGTGTTATTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTAGTGCAATAATGTTTGCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATCAACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAG-CCTTTACTAATCTTAATT-CTGGTGAGTTGCTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATGTTGACACGGCCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCCCGTTCTCTCCAAAAAAAAA]

[+] EMBL AK073795             [CCAAGACGTCGTAGGCAACACCTCCCTTCCCCCCTACCCTTGAACCGAGGCCGAGTCGTGGTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGCAGCAGGAGGAGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACAGCCTTGGGAGTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTAGGGAAGGGGCGGTGCCGGAGCCCGCGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATTTTTTCAGAGGATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAATGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGCGCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGGGCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAGCATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCAGCTCGCAATATACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGCAACTGAAATGATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACAATCATTGCTTGGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGCGGTATTGTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAACTCAGGTTTACTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCACGCATTCAGAAGTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTATTATGCTTGTGGCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTATAGTCCAATTGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGGCATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTATTCTTTCTGAATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGTGGCTTTTATCAGTGTTATTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTAGTGCAATAATGTTTGCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATCAACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAG CCTTTACTAATCTTAATT CTGGTGAGTTGCTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATGTTGACACGGCCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCC                   ]
[+] EMBL CB640237             [                  CACCTCCCTTCCCCCCTACCCTTGAACCGAGGCCGAGTCGTGGTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGCAGCAGGAGGAGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACAGCCTTGGGAGTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTANGGAAGGGGCGGTGCCGGAGCCCGCGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATTTTTTCAGAGGATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAATGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGCGCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGGGCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAGCATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL OS1016A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccGACGGAATAATGCTTATAGTCCAATTGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGGCATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGGGTCTATTCTTTCTGAATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGTGGCTTTTATCAGTGTNATNTTGCTTCCTATTGTGGGNNACGCTGCTGAACATGCTAGTGCAATAATGTTTGCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATCAACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGAATTTGCAACTATTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C98195               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ctgGTAATTATTGTACCAAATNCCCTTGAAGCCCTTTACTAATCTTAATTNTTGGTGAGTTGCTCCTCCGTAGCAGAGCTCAGCCTGNTGGCAGGAGNTGGCAGAATGTTGACACGGCCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGNAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCCCGTTCTCTCCAAAAAAAAA]


>consensus_11225#0 CCAAGACGTCGTAGGCAACACCTCCCTTCCCCCCTACCCTTGAACCGAGGCCGAGTCGTG GTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGCAGCAGGAGG AGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACAGCCTTGGGA GTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTAGGGAAGGGGCGGTGCCGGAGCCCG CGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATTTTTTCAGAG GATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAA TGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGC GCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGG GCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAG CATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCAGCTCGCAAT ATACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGCAACTGAAAT GATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACAATCATTGCT TGGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGCGGTAT TGTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAACTCAGGTTT ACTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCACGCATTCAGA AGTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTATTATGCTTGT GGCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTATAGTCCAAT TGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGG CATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTATTCTTTCTGA ATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCCGTGGCTTTTAT CAGTGTTATTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTAGTGCAATAATGTT TGCCATGAAAGATAAACTTGACATAACACTGGGTGTTGCAATTGGGTCATCAACGCAGAT ATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGA CTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATT TATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCT AATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCA CGGACACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTACTAATCTTAATTCTGGTG AGTTGCTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATGTTGACACGG CCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCAC GTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACA GATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAG TTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCCCGTTCTCTCCAAAAAAAAA



consensusID : consensus_11225#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 608
fasta sequence
                              [NNNANGATNAACTNGNCNNNNCANNNNNTGTTGCAATTGGGTCATCAACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTAC-TAATC-TTAATTCTGGTGAGTTGC-TCCTCCGTAGCAGAGC-TCAGCCTGCTGGCAGGAGCT-GGCAGAATGTT-GACACGGCCGGGAAAATCA-CGTGGTGTCGGTTA-GTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCA-TCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAAAAA]

[-] EMBL CF196847             [NNNANGATNAACTNGNCNNNNCANNNNNTGTTGCAATTGGGTCATCAACGCAGATATCAATGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTAC TAATC TTAATTCTGGTGAGTTGC TCCTCCGTAGCAGAGC TCAGCCTGCTGGCAGGAGCT GGCAGAATGTT GACACGGCCGGGAAAATCA CGTGGTGTCGGTTA GTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCA TCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAAA  ]
[+] EMBL BI810144             [                                                                                                                                                                                                                                                                                                                                            CTTGACGTAATCTTTAATTCTGTTGAGTTGCGTCCTCCGTA CAGAGCGTCAGCCTGCTGGCAGGAGCTGGGCAGAATGTTGGACACGGCCGGGAAAATCAGCGTGCCCTCGGTTAGGTTTGTCCATGATCTGCAGCAGCAATTATTGCAC TTGCAATAGTCAAAAGATCTGAAGGGCATTCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCATTCAAAAA]


>consensus_11225#1 NNNANGATNAACTNGNCNNNNCANNNNNTGTTGCAATTGGGTCATCAACGCAGATATCAA TGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGA ATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGC TACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAG TTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGAC ACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTACTAATCTTAATTCTGGTGAGTTG CTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATGTTGACACGGCCGGG AAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGC AATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACAGATTA CAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGCA TTCAAAAA



consensusID : consensus_11225#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 272
fasta sequence
                              [GACATTATGGGTGTCTATTCTTTCTGAATACCTGGTTAATGCCATTNAGGGGGCATCTGATTCACTGAACCTANCCCGTGGCTTTTAATCAGTGTTAATTTTGCTTCCCATTGTNGGGAACGNTGCTGAACATGCTAAGTGCAATAATGNTTNNCATGAAAGCTAAACTTGACATAACACTNGGGTGTTGCAAATTGGGGCAACAACGCAGATAATCAATGGTTTGTNATTCCATTNNGTNCTGTCAATGGTTGGAATGATNNGGGCAAAAG]

[+] EMBL D43366               [GACATTATGGGTGTCTATTCTTTCTGAATACCTGGTTAATGCCATTNAGGGGGCATCTGATTCACTGAACCTANCCCGTGGCTTTTAATCAGTGTTAATTTTGCTTCCCATTGTNGGGAACGNTGCTGAACATGCTAAGTGCAATAATGNTTNNCATGAAAGCTAAACTTGACATAACACTNGGGTGTTGCAAATTGGGGCAACAACGCAGATAATCAATGGTTTGTNATTCCATTNNGTNCTGTCAATGGTTGGAATGATNNGGGCAAAAG]


>consensus_11225#2 GACATTATGGGTGTCTATTCTTTCTGAATACCTGGTTAATGCCATTNAGGGGGCATCTGA TTCACTGAACCTANCCCGTGGCTTTTAATCAGTGTTAATTTTGCTTCCCATTGTNGGGAA CGNTGCTGAACATGCTAAGTGCAATAATGNTTNNCATGAAAGCTAAACTTGACATAACAC TNGGGTGTTGCAAATTGGGGCAACAACGCAGATAATCAATGGTTTGTNATTCCATTNNGT NCTGTCAATGGTTGGAATGATNNGGGCAAAAG



consensusID : consensus_11225#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 118
fasta sequence
                              [TAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTTACCGTAT]

[+] EMBL CF321094             [TAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTTACCGTAT]


>consensus_11225#3 TAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTNAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTTACCGTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      CCAAGACGTCGTAGGCAACACCTCCCTTCCCCCCTACCCTTGAACCGAGGCCGAGTCGTG 60
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GTCGCCGCGAGTGGAAGGCAACAACTCTCCAAGGCAGGCACAGGCAGCAGCAGCAGGAGG 120
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      AGAGGAGGCAGGCGCGGGCGGCGTGAGCAGCAGCGGCAGCGCCGCATTACAGCCTTGGGA 180
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GTAGGAGGAGGAGGAGGCAGCGGATGATGATCCCTAGGGAAGGGGCGGTGCCGGAGCCCG 240
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      CGGCGGCGTCCTGATCCCCGACCGACGATCGCGGCTGCTGCTGTTGCTATTTTTTCAGAG 300
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GATGGAGAATCCTCAGATTGAGATGGGGGCCTTCAAGGCGAACGGTCCGCAATTGCAGAA 360
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TGGTGGGCTACGTTCCAGCATGGTTCAGTCCTGGAACCTGCAGAGATTCGTTGAGAGCGC 420
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GCTGCGGAGCATCAGGATTGTCATATTCACTTCTAAGCTCAATCTGCTCTTGCCGTTTGG 480
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GCCTGCGTCGATCATTCTACACTATACTACCAGCAGACATGGATTGGTCTTCCTATTCAG 540
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      CATGCTAGGAATAACACCTTTAGCTGAGCGCTTGGGTTATGCAACTGAGCAGCTCGCAAT 600
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      ATACACTGGTCCAACAGTTGGGGGGCTTCTAAATGCTACGTTCGGAAATGCAACTGAAAT 660
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GATCATAGCAATATATGCTTTGAAAAATGGAATGATCCGAGTAGTTCAACAATCATTGCT 720
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      NNNANGATNAACTNGNCNNNNCANNNNNTGTTGCAATTGGGTCATCAACGCAGATATCAA 60
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TGGTTCCATATTATCAAATATGTTGTTGGTTATGGGCTGTGCTTTCTTTGCTGGCGGTAT 780
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      TGTTTGTGATTCCATTTTGTGTTGTCATTGGTTGGATGATGGGGCAAAAGATGGACTTGA 120
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TGTTCATCGGAACAAGGACCAAGTCTTCAGCAAGGCAACTGCAGTTGTTAACTCAGGTTT 840
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTACTAGTCGTGGCATTTATGC 180
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      ACTGTTGATGGCTGTCATGGGACTAATGTTTCCTGCTGTCCTTCACTTCACGCATTCAGA 900
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      TACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGATCTTGTGTTATCTAATAG 240
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      AGTGAGGCAAGGAGCATCAGAGGTTTCTCTTTCAAGGTTCAGCAGTTGTATTATGCTTGT 960
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      TTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCGATGATTGATGCCACGGAC 300
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GGCATATGCAAGCTATCTCTATTTCCAACTAAGTGGACGGAATAATGCTTATAGTCCAAT 1020
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTACTAATCTTAATTCTGGTGAGTTG 360
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TGGCAGTGAAGAAATGCCCAATGAGGATGCAGCAGAGGAAGATGAAGAATCAGAGATTGG 1080
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      CTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAGAATGTTGACACGGCCGGG 420
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      CATGTGGGAGTCCATAGCATGGCTCGCGATGTTGACATTATGGGTGTCTATTCTTTCTGA 1140
consensus_11225#2      ---------------------------------GACATTATGGGTGTCTATTCTTTCTGA 27
                                                                                   

consensus_11225#1      AAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCAGCAATTATTGCACGTTGC 480
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      ATACCTGGTTAATGCCATTGAGGGGGCATCTGATTCACTGAACCTACCC-GTGGCTTTTA 1199
consensus_11225#2      ATACCTGGTTAATGCCATTNAGGGGGCATCTGATTCACTGAACCTANCCCGTGGCTTTTA 87
                                                                                   

consensus_11225#1      AATAGTCAAA-AGATCTGAAGGGCATCTAGGAGGAGGGGTGGTTGTAATGTATACAGATT 539
consensus_11225#3      ---------------------------------------------TAATGTATACAGATT 15
consensus_11225#0      -TCAGTGTTA-TTTTGCTTCCTATTGTGGGAAACGCTGCTGAACATGCTA-GTGCAATAA 1256
consensus_11225#2      ATCAGTGTTAATTTTGCTTCCCATTGTNGGGAACGNTGCTGAACATGCTAAGTGCAATAA 147
                                                                    *  *   * **    

consensus_11225#1      ACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAGTCTCCTTGCATAGTTGC 599
consensus_11225#3      ACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTNAAAAAAAAAAAAAAAAAAAAAA 75
consensus_11225#0      TGTTTGCCATGAAAGATAAACTTGACATAACACTGGG-TGTTGCAA-TTGGGTCATCAAC 1314
consensus_11225#2      TGNTTNNCATGAAAGCTAAACTTGACATAACACTNGGGTGTTGCAAATTGGGGCAACAAC 207
                              ** * **    **    *  *  * *  *                  *     

consensus_11225#1      ATTCAAAAA--------------------------------------------------- 608
consensus_11225#3      AAAAAAAAAAAAAAAAACACTGTCATGCCGTTACTTACCGTAT----------------- 118
consensus_11225#0      GCAGATA-TCAATG----TTTGTGATTCCATTTTGTGTTGTCATTGGTTGGA-TGATGGG 1368
consensus_11225#2      GCAGATAATCAATGG---TTTGTNATTCCATTNNGTNCTGTCAATGGTTGGAATGATNNG 264
                           * *                                                     

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      G-CAAAAGATGGACTTGAATTTCCAACTATTCGAAACAGCAACGCTCTTCATAACAGTAC 1427
consensus_11225#2      GGCAAAAG---------------------------------------------------- 272
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TAGTCGTGGCATTTATGCTACAGGATGGTGTTGCGAACTACTTGAAAGGACTTATGCTGA 1487
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TCTTGTGTTATCTAATAGTTGCCGCCAGTTTCTTCGTTCACGTTGATCCACAATCCAGCG 1547
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      ATGATTGATGCCACGGACACTGTAATTATTGTACCAAATACCCTTGAAGCCTTTACTAAT 1607
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      CTTAATTCTGGTGAGTTGCTCCTCCGTAGCAGAGCTCAGCCTGCTGGCAGGAGCTGGCAG 1667
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      AATGTTGACACGGCCGGGAAAATCACGTGGTGTCGGTTAGTTTGTCCATGATCTGCAGCA 1727
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      GCAATTATTGCACGTTGCAATAGTCAAAAGATCTGAAGGGCATCTAGGAGGAGGGGTGGT 1787
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TGTAATGTATACAGATTACAGAAACAAGGAAATGCAATGCAATGTCGCCCATGTAAAAAG 1847
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      ------------------------------------------------------------
consensus_11225#3      ------------------------------------------------------------
consensus_11225#0      TCTCCTTGCATAGTTGCATTCAATTAATTCAGTTAATGTGGCCCTGGCCCGTTCTCTCCA 1907
consensus_11225#2      ------------------------------------------------------------
                                                                                   

consensus_11225#1      --------
consensus_11225#3      --------
consensus_11225#0      AAAAAAAA 1915
consensus_11225#2      --------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)