These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11228#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 4022 fasta sequence [CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGAATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACCAATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGAGAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTGAAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGAAAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAAGCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAATAAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATTTTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAA-TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAAAAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAACAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGAAAGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATAAAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTCTGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTTTTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAGGATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAATACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACTGAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATAGATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAGTCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACACCTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGCAGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATTGCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTAGCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTCCAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACCCACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACCCACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCCCACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTCCGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCGTGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCGTTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGGGGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTTTTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTATAAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAACTCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTCCCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCCGCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCACTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATCGCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACCGACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTACCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGCGAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTTTGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTTGATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTGTGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTTTATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAATTAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTAATGTATTAAGATGGTTACCATCAA] [+] EMBL CB667984 [CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGAATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACCAATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGAGAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTGAAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGAAAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAAGCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAATAAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATTTTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATTAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCCGAATAAAAAATAAAATAATATCC ] [+] EMBL CB638044 [ AAATAAGGAATGTTGAGAGAAGAATCCGTATAAGAACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCAAAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATTAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATC ] [-] EMBL CB658260 [ TTTGAAA TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTC ] [-] EMBL CB658190 [ t TAAAAATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTCAGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAATACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAGATTTTTAAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGATTTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATCCTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATTGCCGAGACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTC ] [-] EMBL CB667985 [ ATAAATTCTGAAATTATAAAAAGAAAAAAGATTCTAATTAGGAATACAATTTATAAATAACTAAAATTGGCCATACAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACCTATCGAGATAAATTAAGTAACATGCCTATAAAGAAATAGAGTGGTTGCGGTTGATACTACATATAAAAATTGTTAATCAAACATCAAATAGAATCCTAATGACGATTCAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAACGCGATTGCCCATACTTCTAGAAAGTAAAAAAATAAACCCCATTTATAATCATATTTGATTTTTAAAATCTCAATCACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCCCCGACGGCTAGCGGGTCCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTGGACTTGTAGAATCCCAATGACAATAAAGAGTAGG ] [+] EMBL AK106928 [ CCCCATTTATAATCATATTTGATTTTTAAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGTAGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTATGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGAGTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGACAATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAAAAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAACAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGAAAGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATAAAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTCTGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTTTTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAGGATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAATACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACTGAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATAGATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAGTCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACACCTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGCAGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATTGCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTAGCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTCCAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACCCACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCTCCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACCCACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCCCACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTCCGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCGTGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCGTTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGGGGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTTTTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTATAAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAACTCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTCCCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCCGCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCACTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATCGCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACCGACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTACCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGCGAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTTTGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTT ] [+] EMBL CA764916 [ ggggTACTGNGTTGCGAACAAGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCCCTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTTATCCTCAGCAAGTGATCCTTTGTCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGTACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTTGATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTGTGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTTTATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAATTAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTAATGTATTAAGATGGTTACCATCAA] consensusID : consensus_11228#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 838 fasta sequence [TAGGAATACAATTTTGAAAAAAATAAAATTCAAAATGAAAAATAAAAACATTAAAAGAACACAATACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAAAAGATTTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAGTAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATCCTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTTGCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGCAGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTATGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGGGCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACTACAAGTCCAATTTTTAAAGATTTAGAAATTCTAAAAAGTAAAAAAAAAACCAATGATAATCATGTTCTATTTTAAATCTCAATGACAATAAATAAGGGAGGCAGCGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAATCCAGGGCACCACTACCTCAAGCTAC] [-] EMBL CB635109 [TAGGAATACAATTTTGAAAAAAATAAAATTCAAAATGAAAAATAAAAACATTAAAAGAACACAATACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAAAAGATTTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAATAAAGACTATTGAAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAGTAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATCCTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTTGCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTTAAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGCAGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTATGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGGGCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACTACAAGTCCAATTTTTAAAGATTTAGAAATTCTAAAAAGTAAAAAAAAAACCAATGATAATCATGTTCTATTTTAAATCTCAATGACAATAAATAAGGGAGGCAGCGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAATCCAGGGCACCACTACCTCAAGCTAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11228#0 CTTTAGAGTTTTCTTTTAAAGTTATTTATCCGATTTAATTCTTACGAACACAACCGTGGA 60 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 ATTGGATCGTAAATCGGATGAGTAGTGTAAGAGAATTTTATTTGAAACATAGGTGATACC 120 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AATATATTTTCTATTTACATGTTGATATCTAGATAGGGTCTCTCGTTAGCACTAAAACGA 180 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GAGGCCTCGTGATTTAGATTTTGCCATCTATCTATCTATTATATTATTAAAACAGCTTTG 240 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AAAGGAGGCACTATGTTCGCGGTGGGGGCTAGAAATTCCCACATTATTCTCATAAAAAGA 300 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AAAAGAGTGTCCAAATAGAAATACAGTTTAAAAATATCTGAAATTCGGAATTAAAAATAA 360 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GCAATATGGAAAGAAGAGTCCGTATAAGAACCTAATACGAGATTAATCAAAATCTAGAAT 420 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AAAAATAAAATAAAATCTGAAATTAGAAAAGAAAAGGAGAGTCCAAGTAGGAATACAATT 480 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TTAAATAACTGAATTTCGGAATTAAAAATAAGGAATGTTGAGAGAAGAATCCGTATAAGA 540 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 ACCCAATATGAGATTAATTAATATTCAAAATAAAAATAAAAATAAAATCTGAAATCAGCA 600 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AAAAGAAAAGAAGAGTTCAAGTAGGAATACAGTTTAAAATTAACTGAAATTTGAAATAAA 660 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AATAAGAAATATTGAAAGAAGAATCCATATAAGAGCCCAATACAAGATTAATTAAAATTC 720 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AGAATAAAAAATAAAATAATATCCAAAATTAGAAAATTAAAAGAGAGTTCAAAGTAGGAA 780 consensus_11228#1 ------------------------------------------------------TAGGAA 6 ****** consensus_11228#0 TACAATTTTGAAACACTTGAAATTCAAAAATAAAAATATAAAAATATTAAAAGAAAAAAG 840 consensus_11228#1 TACAATTTTGAAAAAAATAAAATTCAAAATGAAAAAT--AAAAACATTAAAAGAACACAA 64 ************* * * ********** ****** ***** ********** * * consensus_11228#0 --------------ATTTTT---AAGAAATAAATTCTGAAATTATAAAAAGAAAAAAGAT 883 consensus_11228#1 TACAATATTAACTAATTTTTTAGAAAAAATAAATTCTGAAATTAGAAAAA-----AAGAT 119 ****** ** ****************** ***** ***** consensus_11228#0 TTTAATTAGGAATACAATTTATAAATAACTAAAATTGGTGATAAAAAATAAAGACTATTG 943 consensus_11228#1 TTATATTAGGAATAAAATTTATAAATAACTAAAATTTATGATAAAAA-TAAAGACTATTG 178 ** ********** ********************* ********* ************ consensus_11228#0 AAAGAAAAGACCATCTAAAACACATAACGAGATAAATTAAGTAACATGCCTATAAAGAAA 1003 consensus_11228#1 AAAGAAAAGACCATCTAAAACACATGACGAGATAAATTAAGTAACATGCCTATAAAGTAG 238 ************************* ******************************* * consensus_11228#0 TAGAGT-GGTTGCGGTTGATACTACATATAAAAATTGTTAATAAAACATCAAATAGAATC 1062 consensus_11228#1 TAGAGTTGGTGGTGGTTAATACGGCATATAAAAATTATTAATAAAACACCAAATAGAATC 298 ****** *** * **** **** ************ *********** *********** consensus_11228#0 CTAATGACGATTAAAAGGAGGGATGGCAGGCAGGCCGTGAAGTAAACGAGCAAGGCGATT 1122 consensus_11228#1 CTAATGACGATTAAAAGGAGGGACATCAGGCATGCCGTGAAGTAAACAAGTAAAGCGGTT 358 *********************** ****** ************** ** ** *** ** consensus_11228#0 GCCGAGACTTCTAGAAAGTA---AAAAAATAAACCCCATTTATAATCATATTTGATTTTT 1179 consensus_11228#1 GCCGGGACTTCTAGAAAGTATAAAGAAAAAAAACCACATTGATAATCATTCTCGATTTTT 418 **** *************** * **** ***** **** ******** * ******* consensus_11228#0 AAAATCTCAATAACAATAAAAAGGAGAAGCAGCGGGCGGGGTGTATAAGAGTATAGTTGT 1239 consensus_11228#1 AAAATCTCAATGACAATAAAAAGGAGAAGCAACGAGTGGGGTGTATAAGAGTATAGTTGC 478 *********** ******************* ** * ********************** consensus_11228#0 AGAGCCGCCGACGGTTAGCGGGACCTCTAGAAAATAAAAAATAAATTCCGACGATAGTTA 1299 consensus_11228#1 AGAGCCTCCGACAGTTGACGGGACTTCTAGAAAATAAAAAATGAATTGTAACGATAGTTA 538 ****** ***** *** ****** ***************** **** ********** consensus_11228#0 TGTTCGATTTGTAGAATCCCAATGACAATAAAGAGTAGGTGGCGAATGGGCCGTAGAGGA 1359 consensus_11228#1 TGTTCGATTTTTAGAATCACAATAACAATAAAGAGTAGGCGGCGGACGGGCTGCAGAGGG 598 ********** ******* **** *************** **** * **** * ***** consensus_11228#0 GTATACTGACATCGTTTGACGGGACTTCTAAAAGTTACAAAAAATGAAACCTAACAAGAC 1419 consensus_11228#1 GCATAGTGGCATCGTTTGATGAGACTTCTAAAAATTATAAAAAATAAAACT--ACAAGTC 656 * *** ** ********** * *********** *** ******* **** ***** * consensus_11228#0 AATAAACTCTAAAAACTACAAGGTCCAATTAAGGTTCAGAACTTCTAAAAAGTAAAAAAA 1479 consensus_11228#1 --CAATTTTTAAAGA-------------------TTTAGAAATTCTAAAAAGTAAAAAAA 695 ** * **** * ** **** ****************** consensus_11228#0 AAAACTAATGATGATCATGTTCAATTTTAAAATCTCAATGACAATAAAAAAGGGAGACAA 1539 consensus_11228#1 AAA-CCAATGATAATCATGTTCTATTTTAAA-TCTCAATGACAATAAATAAGGGAGGCAG 753 *** * ****** ********* ******** **************** ******* ** consensus_11228#0 CAGGCGAGCCATAAAGAAGTACAATGACAAAGCCGCTGACGGTTTGGTGGGACTTTTAGA 1599 consensus_11228#1 CGAGCGAGCCGTAGAGGAGTACAATGGCAAAACCGCTGATGGTTTGGCGGGACTTAGAAT 813 * ******* ** ** ********* **** ******* ******* ******* * consensus_11228#0 A-AGTAAAAAATGAACTTGAATGATAGTTATGTTCGATTTTTAAAATCCCAATGATAATA 1658 consensus_11228#1 CCAGGGCACCACTACCTCAAGCTAC----------------------------------- 838 ** * * * ** * * consensus_11228#0 AAGAAAAAAGACAGTGGACGGGCCGTAGAGAAGTATAATGGCAGCGTTTGGCGGGACTTC 1718 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TGGAAATTATAAAAACGAAACCCAGTGAGACAATAACCTCTAAAAACTAAGATCCAATTT 1778 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TTAAAGGTTTCAAAGAGAATGAATAAAAATAGTGGTAGATCGAGCAAGCAAATAAAGAAG 1838 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GATATGATAGAAGTAAGGGGTAGCAGCTAGGGCGACTTTTAAAAATTATATAATTAGAAA 1898 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TACGGGGATGATAATGTTTGGTCTTTCAGCTATTTAATAAATTTTAAATAAAATCATACT 1958 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GAAAAATATTGTTTGTTTGCTAGCCGCGCAATTGCGCGGGCCACCCAGCTAGTTCATATA 2018 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GATGTTAATGAATCTAAACATGTGTGTGTCTAGATTTTTTAACATCTATATAAAGATGAG 2078 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TCATCTACCCTATAATTCACCAACTCATCTTACTCATATCTCATCCTTACACTCTTACAC 2138 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CTTACATATCCAACGGCTCATATCTACCTGCTCTATAATCCAACGGTCCAGATCGTGTGC 2198 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AGCTTACTCCCTTCTCCCTCCGCGCTCCTCCCCACGTCCACGCGGCTCCTTCTCGCGATT 2258 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GCCCCGTCAATCTCGTGATTCCCGTGAATCGCCCCAATCTCGCCCCCTTCATCGGCTCTA 2318 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GCCGTGTCTCCCATCGCCCCGCGCCGCCGCCTCACCATCGTCGTCGCTCCCTTCCCTCTC 2378 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CAACGCCGCCGTCGCCTATCACGCCCGACCCCCTCCATCGCTTCCCCAAACCGTGTCCCT 2438 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCCGCCGACGCTGATCTGCTCCACCACC 2498 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CACTCCCCGCTGCACGCGACCAGTTCGCCGTCACGCGCCGTGACCCGTGCTCCCACACCT 2558 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CCCCGCCGCCGGAAGCCCTCCGTCGCCAGGTCGCTGCCGACGCCGATCTGCCCCGCCACC 2618 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CACTCCCCGCTCCCCACTGCACGCGGCCAGTTCGCCGTCGTGCGGCTAGACCCGTTCTCC 2678 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CACACCTCCCCGCCACCGGAAGCCCTCCGTCGCCACGTCGCCGCCGACGCCGATCTGCTC 2738 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CGCCACCCACTCCCCGCTGCACGCGGCCAGTTCGCCGTCATGCTTCGCCGTCACGCACCG 2798 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TGACCCGTGGTCCCACCGGTTAGTTTATGCCTAGCGCTAACACAATGCCAATTGCTGTCG 2858 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TTCAGTACGTGCAATGCTCAGTATATACAATGTTTCCGCCAATATCAGGTTATGGAATGG 2918 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GGTGAACTAATACATCCGGATTGGTGAGATCAGGGTGATTGGGCTTTTTTTTTCAGTTTT 2978 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TTCTCATGATGAAAATTTTGGGATGTTTCTCATTTAAGTGGGATGGTAATGTTGAACTAT 3038 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 AAATCTGGTGTGTAGCATTGCTACTGTGGCAGCAGTTTGCTGCTTACTGGCTGAATAAAC 3098 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TCATAAAATTGTTTGCCTATGTGCTCAATGATGTACAGTTGACACCATCCTCCCCAGCTC 3158 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CCCGCCGTCACCACGCATCCCACCGCGTCGCCCCCAGTCTCCGCATCGTCAACTGCCTCC 3218 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GCTCCTATGTGAGTCATCAATCGCCTCCACTCCACCTCGTCAACCACCTCCGCGCGTCCA 3278 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CTTGTCTTGGCCTCTTCAACAACGTCTCCCGCCTCGACCTGATTCACCGGAAGATCCATC 3338 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GCCGTCATCTGGCAGGAGCAGAAGCGACCAATTCATCTTGGCATATTTCTTAAGATCACC 3398 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GACACCAGCCGCGCCGTGATTCCGACACCGGGACTCCTTGCCCCTGCGACAGCTTCTCTA 3458 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CCGCAACACCGTCAAGTGATATCTTTTGCACCCTGACCGGAAACCTCTCTACTGCGTTGC 3518 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GAACAGGGTTTTGGAAATCCTTAACGGATGACTTTTGAAGTCTAAATTTTTCTTTCATCC 3578 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 CTGCCACAGGAGGTACATACTGTGCCGTGGAAGATGTGTAATCCTCAGCAAGTGATCCTT 3638 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TGCCTTTCCATAAAAATGTGCAAAAAAGGTGTAACAAGACAATTTGACAGGATAATTCGT 3698 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 ACTAAAATATTGGGCATAATGAGAATATGGCTTGNTGAGCTTTATGGGATTATGGTCTTT 3758 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 GATTGAGTGCTTTCTATAGGTCGTACTATTAATATGTCCTACTGCATGTTTTACAAGTTG 3818 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TGCTACCTATTTATTTATTTTCTAAAAGGACCAACAGGTGCTATACTCATTCAACATGTT 3878 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TATGAGCTGTCATTATTGATGTTAGTAAAACTTGGATTGGCAGTTTTCATGGTTTCAAAT 3938 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 TAGNACCTACAGTCTTCATTTTACAGTATAGACCAAATGAAGCGGCAACATTTTTTAGTA 3998 consensus_11228#1 ------------------------------------------------------------ consensus_11228#0 ATGTATTAAGATGGTTACCATCAA 4022 consensus_11228#1 ------------------------ |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||