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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 1123 cluster # 1123       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_1123#0 length = 689 sequences # 2  

consensusID : consensus_1123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 689
fasta sequence
                              [TAAAAATCTTTTAAAACAAAAGTACAAAGTTGGCTTGTTTTAACAACATGAAAGGGGGTTAGTTCAAAAAATAAAAATAGTTACCTGAAAACAAAAAAAAAAAATCTTTGTTTGAAATTACCCAAAATGGGAGTGAAAACAAACACAAATGGCCCCGGCACAAACAACCTTCTCAATAATTAAAAAACAAAGCTAATGGCCAAAACCCAATCTAACTTGTTAAATTGGGGTTACAAGTTTGCCTGTACCTGACTAATCCACTAAAGTAGTAGTACCCCCTACACAGCTGCTAACTGCATGATCGGATCAAAACGGAAAAAGGTTTGCCCCAACAAGTACAATATTAACAGTCCCCGTTGTTGAACCTTCATGAAAAAACTTCAGTTGTTTCTGCAAAATTTTGCATCCATGGGGCCCCCCTGCCCCCTTGGGGAATGTACAAATGAACCCTGCCTCCCTCTTTGGTTTTTACCACCACCCTGGGGGTTATCATTATGGGACTTTAGGGAAGCCGCTTCATCAACAGCTCCAGGGACATGCTCTGATGGCTGATGGAAAAGCAACAAAGCTATGGACCGATCAATTGGATTTGTCTGGGTCTCGATGCCCCCAGGATCAACAACCCTACAAAACAGGAATATCAAAGTGGAAAGGCAACATATAAACAAAGCGGCCTTCTTACCTGGGTT]

[+] EMBL CB669690             [TAAAAATCTTTTAAAACAAAAGTACAAAGTTGGCTTGTTTTAACAACATGAAAGGGGGTTAGTTCAAAAAATAAAAATAGTTACCTGAAAACAAAAAAAAAAAATCTTTGTTTGAAATTACCCAAAATGGGAGTGAAAACAAACACAAATGGCCCCGGCACAAACAACCTTCTCAATAATTAAAAAACAAAGCTAATGGCCAAAACCCAATCTAACTTGTTAAATTGGGGTTACAAGTTTGCCTGTACCTGACTAATCCACTAAAGTAGTAGTACCCCCTACACAGCTGCTAACTGCATGATCGGATCAAAACGGAAAAAGGTTTGCCCCAACAAGTACAATATTAACAGTCCCCGTTGTTGAACCTTCATGAAAAAACTTCAGTTGTTTCTGCAAAATTTTGCATCCATGGGGCCCCCCTGCCCCCTTGGGGAATGTACAAATGAACCCTGCCTCCCTCTTTGGTTTTTACCACCACCCTGGGGGTTATCATTATGGGACTTTAGGGAAGCCGCTTCATCAACAGCTCCAGGGACATGCTCTGATGGCTGATGGAAAAGCAACAAAGCTATGGACCGATCAATTGGATTTGTCTGGGTCTCGATGCCCCCAGGATCAACAACCCTACAAAACAGGAATATCAAAGTGGAAAGGCAACATATAAACAAAGCGGCCTTCTTACCTGGGTT]
[+] EMBL CB617987             [                                            AACATGAAAGGGGGTTAGTTCAAAAAATAAAAATAGTTAGCTGAAAACAAAAAAAAAAAATCTATGTTTGAAATTACCCAAAATGTGAGGGAAAACAAACCCAAATGGCCACGGCACAAACAACCTTCTCAATAATTAAAATACAAAGCTAAGGGCCAAAACCCAATCTAACTTGTTAAATTGGGGTAACAAGTTTGCCTGTACCTGACTAATCAACTAAAGTAGTAGTACCCCCTACCCAGCTGCTAACTGCATGATCGGATCAAAACGGAAAAAGGTTTGCACCAACAAGTACAATATTACCAGCCCCAGTTGTTGAACCTTCATGAAATAACTTCAGTTGTTTCTGCAAAATTATGCATCCATGGGGTCTCCCTGCCCTCTTGGGGAATGTACAAATAAACCATGCTTCCCTCTTTGGTTTTTACCACCACCCTGGGGGTTATCATTATGGGACTTTAGGGAAGCCGCTTCATCAACAGCTCCAGGGACATGCTCTGATGGCTGATGGAAAACCAACAAAGCTATG                                                                                                                    ]


>consensus_1123#0 TAAAAATCTTTTAAAACAAAAGTACAAAGTTGGCTTGTTTTAACAACATGAAAGGGGGTT AGTTCAAAAAATAAAAATAGTTACCTGAAAACAAAAAAAAAAAATCTTTGTTTGAAATTA CCCAAAATGGGAGTGAAAACAAACACAAATGGCCCCGGCACAAACAACCTTCTCAATAAT TAAAAAACAAAGCTAATGGCCAAAACCCAATCTAACTTGTTAAATTGGGGTTACAAGTTT GCCTGTACCTGACTAATCCACTAAAGTAGTAGTACCCCCTACACAGCTGCTAACTGCATG ATCGGATCAAAACGGAAAAAGGTTTGCCCCAACAAGTACAATATTAACAGTCCCCGTTGT TGAACCTTCATGAAAAAACTTCAGTTGTTTCTGCAAAATTTTGCATCCATGGGGCCCCCC TGCCCCCTTGGGGAATGTACAAATGAACCCTGCCTCCCTCTTTGGTTTTTACCACCACCC TGGGGGTTATCATTATGGGACTTTAGGGAAGCCGCTTCATCAACAGCTCCAGGGACATGC TCTGATGGCTGATGGAAAAGCAACAAAGCTATGGACCGATCAATTGGATTTGTCTGGGTC TCGATGCCCCCAGGATCAACAACCCTACAAAACAGGAATATCAAAGTGGAAAGGCAACAT ATAAACAAAGCGGCCTTCTTACCTGGGTT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)