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Oryza sativa
cluster # 11252 cluster # 11252       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11252#0 length = 1137 sequences # 5  
consensus_11252#1 length = 689 sequences # 1  
consensus_11252#2 length = 673 sequences # 2  

consensusID : consensus_11252#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1137
fasta sequence
                              [AAGACCCTTGATCTACCTACATCGAAACAAGCCGACGGCGAGCGCGAATTCCGAGTAGAGATCGACATCCTGAGCAGGTTAGATCACCCCAATCTGGTCACTCTGATCGGCTATTGTGCTGACGGCAAGCACCGGTTTGTCGTCTACGAGTTCATGCCCAAAGGCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGGGGCTCGCCTACCTCCACTCCACCACCGCTGTCGGCGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGAACTATACTTGTGTGGAAAGTGCACACGTTGAATCTGAAGGCCAGGA]

[+] EMBL CB655406             [AAGACCCTTGATCTACCTACATCGAAACAAGCCGACGGCGAGCGCGAATTCCGAGTAGAGATCGACATCCTGAGCAGGTTAGATCACCCCAATCTGGTCACTCTGATCGGCTATTGTGCTGACGGCAAGCACCGGTTTGTCGTCTACGAGTTCATGCCCAAAGGCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGGGGCTCGCCTACCTCCACTCCACCACCGCTGTCGGCGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AK062323             [                                                                                                                                                                   GCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGGGGCTCGCCTACCTCCACTCCACCACCGCTGTCGGCGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGAACTATACTTGTGTGGAAAGTGCACACGTTGAATCTGAAGGCCAGGA]
[-] EMBL CB644054             [                                                                                                                                                                                                                                                                                                                              AACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGAGGAATCATTTTTCTTTCAAAATTTGA                                                              ]
[-] EMBL CB644021             [                                                                                                                                                                                                                                                                                                                                CATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGGGAAATCATTTTTCTTTCAA                                                                     ]
[-] EMBL CB655407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTTGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAAGGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGTTTTAAAGTGGTGTGGAAAGTGC                        ]


>consensus_11252#0 AAGACCCTTGATCTACCTACATCGAAACAAGCCGACGGCGAGCGCGAATTCCGAGTAGAG ATCGACATCCTGAGCAGGTTAGATCACCCCAATCTGGTCACTCTGATCGGCTATTGTGCT GACGGCAAGCACCGGTTTGTCGTCTACGAGTTCATGCCCAAAGGCAACCTGCAAGACATC CTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGC GCCGCGAGGGGGCTCGCCTACCTCCACTCCACCACCGCTGTCGGCGTCCCCGTCGTCCAC CGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGAC TTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTT GGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGC GACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGAC CTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGAC CGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCCGGAG TCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGC CCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATC TGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACT CCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTG TTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGAGAAA AAAAGAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTG GAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAAT TAAACTTTGGAACTATACTTGTGTGGAAAGTGCACACGTTGAATCTGAAGGCCAGGA



consensusID : consensus_11252#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [GCCCAAAGGCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGNGGGCTTGCCTACCTCCAACTCCACCACCGCTGTNGGNGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTTGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGCCGGCCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCAAAAAAAAAAA]

[-] EMBL CA758958             [GCCCAAAGGCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGNGGGCTTGCCTACCTCCAACTCCACCACCGCTGTNGGNGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTTGATCCGGAGTACGCTCTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGCCGGCCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCAAAAAAAAAAA]


>consensus_11252#1 GCCCAAAGGCAACCTGCAAGACATCCTCAATGGGATAGGAGAGGTGAGGATGGACTGGCC GGTGCGGCTGCGAATAGCGCTGGGCGCCGCGAGGNGGGCTTGCCTACCTCCAACTCCACC ACCGCTGTNGGNGTCCCCGTCGTCCACCGCGACTTCAAGTCCAGCAACATCCTCCTCACC GAGCACTTTGAGGCTAAGATCTCTGACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATC GACCTGTACGCCACCACCAGGGTGCTTGGCACCTTCGGCTACTTTGATCCGGAGTACGCT CTGACGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAG CTCCTCACGGGGCGCCGGCCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCAT CATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGT TCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAA GATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATT TTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAAT TTCTCACATATTTGTTCCAAAAAAAAAAA



consensusID : consensus_11252#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 673
fasta sequence
                              [GATTAGGTAGGCCGAGACAAGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGTGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGTTGCGTTTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGAACTAAAAAAAAAAAAAAAA]

[-] EMBL CA758957             [GATTAGGTAGGCCGAGACAAGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGTGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGTTGCGTTTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGAACTAAAAAAAAAAAAAAAA]
[+] EMBL CA765489             [                                GCTGCAGAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGTGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATT                                                    ]


>consensus_11252#2 GATTAGGTAGGCCGAGACAAGGGGAAGCTGACGCTGCAGAGCGACGTGTACGCGTTNGGC GTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCATCGACCTCAGCCAGGGCACCCCG GAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGGCGACCGGAAGCGGCTGCGCAAG GTGGTGGACAGGGACATGGTGAGGTCGTCCTACACGCCGGAGTCGGTGTCCATGTTCGCC GGCCTCGCCGCCCGTTGCGTTTGCTTCGAGAGCGCCGGCCGCCCCTCCATGGCCGANTGC GTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAAGATCTGATCGCTGCATCCATTG CCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGATTACTCCGGCGAAGACGATGGCG GTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTTGGTGTTTGTACAGAAATTTTTT TGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGAGAAAAAAAAGAAAGAGTGGGGG CTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCCTGTTGGAAATGACTCAAGCTGA GGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGACTAATTAAACTTTGGAACTAAA AAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11252#0      AAGACCCTTGATCTACCTACATCGAAACAAGCCGACGGCGAGCGCGAATTCCGAGTAGAG 60
consensus_11252#1      ------------------------------------------------------------
consensus_11252#2      ------------------------------------------------------------
                                                                                   

consensus_11252#0      ATCGACATCCTGAGCAGGTTAGATCACCCCAATCTGGTCACTCTGATCGGCTATTGTGCT 120
consensus_11252#1      ------------------------------------------------------------
consensus_11252#2      ------------------------------------------------------------
                                                                                   

consensus_11252#0      GACGGCAAGCACCGGTTTGTCGTCTACGAGTTCATGCCCAAAGGCAACCTGCAAGACATC 180
consensus_11252#1      -----------------------------------GCCCAAAGGCAACCTGCAAGACATC 25
consensus_11252#2      ------------------------------------------------------------
                                                                                   

consensus_11252#0      CTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGC 240
consensus_11252#1      CTCAATGGGATAGGAGAGGTGAGGATGGACTGGCCGGTGCGGCTGCGAATAGCGCTGGGC 85
consensus_11252#2      ---------------------------GATTAGGTAG-GCCGAGACAAGGGGAAGCTGAC 32
                                                  ** * *   * ** *   * *   *     * *

consensus_11252#0      GCCGCGAGGGGG-CTCGCCTACCTCCA-CTCCACCACCGCTGTCGGCGTCCCCGTCGTCC 298
consensus_11252#1      GCCGCGAGGNGGGCTTGCCTACCTCCAACTCCACCACCGCTGTNGGNGTCCCCGTCGTCC 145
consensus_11252#2      GCTGCAGAGCGA-CGTGTACGCGTTNG---GCGTCGTGCTCCTGGAGCTCCTCACGGGGC 88
                       ** **   * *  *  *    * *       *  *       * *   *** *   *  *

consensus_11252#0      ACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTG 358
consensus_11252#1      ACCGCGACTTCAAGTCCAGCAACATCCTCCTCACCGAGCACTTTGAGGCTAAGATCTCTG 205
consensus_11252#2      GGCGCGCCATCGACCTCAGCCA-------------GGGCACCCCGGAGC--AGAACCTCA 133
                         **** * ** *   **** *             * ****   *  **  *** *    

consensus_11252#0      ACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCAC-CAGGGTG 417
consensus_11252#1      ACTTCGGGTTGGCCAAGCTGATGCCGCAGGATATCGACCTGTACGCCACCAC-CAGGGTG 264
consensus_11252#2      TCGTGAGGATGC---AGCAGGTGTC------CGGCGACCGGAA-GCGGCTGCGCAAGGTG 183
                        * *  ** **    *** * ** *         ***** * * **  *  * ** ****

consensus_11252#0      CTTGGCACCTTCGGCTACTTCGATCCGGAGTACGCTCTG-ACGGGGAAGCTGACGCTGCA 476
consensus_11252#1      CTTGGCACCTTCGGCTACTTTGATCCGGAGTACGCTCTG-ACGGGGAAGCTGACGCTGCA 323
consensus_11252#2      GTGGACA----GGGACA---TGGT---GAGGTCGTCCTACACGCCGGAGTCGGTGTC--- 230
                        * * **     **  *    * *   ***  **  **  ***  * **  *  *     

consensus_11252#0      GAGCGACGTGTACGCGTTCGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCGGCGCGCCAT 536
consensus_11252#1      GAGCGACGTGTACGCGTTNGGCGTCGTGCTCCTGGAGCTCCTCACGGGGCG--------- 374
consensus_11252#2      ------CATGTTCGCCGGCCTCGCCGC-CCGTTGCGTTTGCTTCGAGAGCG--------- 274
                             * *** ***      ** **  *   **    * **    * ***         

consensus_11252#0      CGACCTCAGCCAGGGCACCCCGGAGCAGAACCTCATCGTGAGGATGCAGCAGGTGTCCGG 596
consensus_11252#1      ------------------------------------------------------------
consensus_11252#2      ------------------------------------------------------------
                                                                                   

consensus_11252#0      CGACCGGAAGCGGCTGCGCAAGGTGGTGGACAGGGACATGGCGAGGTCGTCCTACACGCC 656
consensus_11252#1      ------------------------------------------------------------
consensus_11252#2      ------------------------------------------------------------
                                                                                   

consensus_11252#0      GGAGTCGGTGTCCATGTTCGCCGGCCTCGCCGCCCGCTGCGTCTGCTTCGAGAGCGCCGG 716
consensus_11252#1      --------------------------------------------------------CCGG 378
consensus_11252#2      --------------------------------------------------------CCGG 278
                                                                               ****

consensus_11252#0      CCGCCCCTCCATGGCCGACTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAA 776
consensus_11252#1      CCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAA 438
consensus_11252#2      CCGCCCCTCCATGGCCGANTGCGTCAAGGAGCTCCAGTTCATCATGTACGCCAACATGAA 338
                       ****************** *****************************************

consensus_11252#0      GATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGAT 836
consensus_11252#1      GATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGAT 498
consensus_11252#2      GATCTGATCGCTGCATCCATTGCCAATCTTCGTTTGGCTCGTTCATATCAATCATTTGAT 398
                       ************************************************************

consensus_11252#0      TACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTT 896
consensus_11252#1      TACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTT 558
consensus_11252#2      TACTCCGGCGAAGACGATGGCGGTGGAGAAGAAGAAGAAGAAGATGATGATGATGATCTT 458
                       ************************************************************

consensus_11252#0      GGTGTTTGTACAGAAAATTTTTTGTGGTTTTATTGCGGAATTTTCTGCCCAAAGTCCAGA 956
consensus_11252#1      GGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGA 618
consensus_11252#2      GGTGTTTGTACAGAAATTTTTTTGTGGTTTTTTGGCGGAATTTTCTGCCCAAAGTCCAGA 518
                       **************** ************** * **************************

consensus_11252#0      GAAAAAAA-GAAAGAGCGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCC 1015
consensus_11252#1      GAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCC 678
consensus_11252#2      GAAAAAAAAGAAAGAGTGGGGGCTTTGTGGTGGTATAAAAATTTCTCACATATTTGTTCC 578
                       ******** ******* *******************************************

consensus_11252#0      TGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGA 1075
consensus_11252#1      AAAAAAAAAAA------------------------------------------------- 689
consensus_11252#2      TGTTGGAAATGACTCAAGCTGAGGTAGCTAGAGCGAAATCATTTTTCTTTCAAAATTTGA 638
                             ***                                                   

consensus_11252#0      CTAATTAAACTTTGGAACTATACTTGTGTGGAAAGTGCACACGTTGAATCTGAAGGCCAG 1135
consensus_11252#1      ------------------------------------------------------------
consensus_11252#2      CTAATTAAACTTTGGAACTAAAAAAAAAAAAAAAA------------------------- 673
                                                                                   

consensus_11252#0      GA 1137
consensus_11252#1      --
consensus_11252#2      --
                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)