These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11257#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1732 fasta sequence [CTCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAGCCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACCAGGAATATACTTTGGTCGGACAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGCAAAGGAATGATATATAGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACATTTGTACTAAATTGATTTTACTGAGGTATTGTCCCTCTTGTATTTTCAGGGCTGTGTCAACATAAAGTGTACTCTTGCTGCATTCGGACCAAGTATTCCATACTATGTGTAACAATGTAATTAGACATAGGCATCAAGTTCTGTATGTATGATCAGAAAATGTACACCAAGGAGAGCCCTGTGCTGTTGTGCACATATTGACATATTGTACAAAGAAATGTAGCAATCGCATTGCCAAGCAAATGACTTGATGAATAAGAACATCAGATTTGGGAGAATAAATGTA] [+] EMBL AK073050 [CTCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAGCCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACCAGGAATATACTTTGGTCGGACAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGCAAAGGAATGATATATAGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACATTTGTACTAAATTGATTTTACTGAGGTATTGTCCCTCTTGTATTTTCAGGGCTGTGTCAACATAAAGTGTACTCTTGCTGCATTCGGACCAAGTATTCCATACTATGTGTAACAATGTAATTAGACATAGGCATCAAGTTCTGTATGTATGATCAGAAAATGTACACCAAGGAGAGCCCTGTGCTGTTGTGCACATATTGACATATTGTACAAAGAAATGTAGCAATCGCATTGCCAAGCAAATGACTTGATGAATAAGAACATCAGATTTGGGAGAATAAATGTA] [+] EMBL CF337473 [CTCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGG AGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATA ] [-] EMBL D42541 [ TTTCTCTG CATTTGTACTAAATTGATTTTACTGAGGTATTGTCCCTCTTGTATTTTCAGGGCTGTGTCAACATAAAGTGTACTCTTGCTGCATTCGGGCCAAGTATTCCATACTATGTGTAACAATGTAATTAGACATAGGCATCAAGTTCTGTATGTATGATCAGAAAATGTACNCCAAGGAGAGCCCTGTGCTGTTGTGCACATATTGACATATTGTACAAAGAAATGTAGCAATCGCATTGCCAAGCAAATGAC ] consensusID : consensus_11257#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1338 fasta sequence [AGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATATGTTTTTCAGGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAACAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACAAAAAAAAAAAAAAAAAACACTGTCA] [+] EMBL CB648106 [AGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATATGTTTTTCAGGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATAT ] [-] EMBL CF318013 [ TTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAACAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACAAAAAAAAAAAAAAAAAACACTGTCA] consensusID : consensus_11257#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1321 fasta sequence [TCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGA] [+] EMBL AK064044 [TCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGATGATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTTCATGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATGGGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAACAACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAATCTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGGAGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAACTATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGA] [+] EMBL CF324074 [ TCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATATTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGGGGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGGGCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAAATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATGATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTCCACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTGCCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAATATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGATGATGCT ] consensusID : consensus_11257#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 470 fasta sequence [GCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATGTAATTTTTTTTGCCCGTTTTCTAAACCAAAACTTCTCCAGAACCATACTATATTTTCTCTGCTCAATCGTTGCACAACTAACATTAGTTTTTGCAGTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACATTTGTACTAAAT] [+] EMBL CF324271 [GCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCTGCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATGTAATTTTTTTTGCCCGTTTTCTAAACCAAAACTTCTCCAGAACCATACTATATTTTCTCTGCTCAATCGTTGCACAACTAACATTAGTTTTTGCAGTTACCGAAAGCTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCTGGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAATAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGTAAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAGCAAAGCTTTCTCTGACATTTGTACTAAAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11257#1 ----------------------AGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATA 38 consensus_11257#2 -TCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATA 59 consensus_11257#0 CTCTTCGGCGGCTCACTCGATCAGCCTCTCCTCCTCTCTACCTGCCCCGCATCTCGAATA 60 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 TTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGG 98 consensus_11257#2 TTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGG 119 consensus_11257#0 TTTGGCCAGTAAAGCGAAAGTGAAGGGTTTGCAAATCGGCTAGCAGTTCAGAGAAAATGG 120 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 GGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGG 158 consensus_11257#2 GGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGG 179 consensus_11257#0 GGGTTGTTGGATGGAGGGTTCGTTCGATGGTCCAACATTTGGGTTGGAACTGTCGCCGGG 180 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 GCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAA 218 consensus_11257#2 GCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAA 239 consensus_11257#0 GCCTCTCGTCCGCTGCGGTTCAATCTCAGTTGGAGAATGTAGGATTCATAGGACTGGGAA 240 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATG 278 consensus_11257#2 ATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATG 299 consensus_11257#0 ATATGGGTGCCCATATGGCGAGGAACCTGGTAATGGCTGGATATAAAGTGACTGTTCATG 300 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTC 338 consensus_11257#2 ATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTC 359 consensus_11257#0 ATGTCAATGAGAATACCATGAAGAAATTCTCGGATGATGGAATTCCCACAAAACTGTCTC 360 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 CACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCATA 398 consensus_11257#2 CACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCAT- 418 consensus_11257#0 CACTTGAAGTGTCCAAGTCTAGTGATGTCGTAATTACGATGCTGCCTTCGTCTGCCCAT- 419 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 TGTTTTTCAGGTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTG 458 consensus_11257#2 ----------GTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTG 468 consensus_11257#0 ----------GTATTAGATGTATACAATGGACGGAATGGTTTGCTTGCTAATGGGGGCTG 469 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 CCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAAT 518 consensus_11257#2 CCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAAT 528 consensus_11257#0 CCTTGGACCTTGGTTGTATATAGATTCATCCACAGTTGATCCACAAACATCAAGGAAAAT 529 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGAT 578 consensus_11257#2 ATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAACCGAT 588 consensus_11257#0 ATCCATGGACATCTCAAGATGCACTTTGAAAGAAAAGAAAGCCTATGCTGAAAAGCCGAT 589 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 GATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTT 638 consensus_11257#2 GATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTT 648 consensus_11257#0 GATGCTGGATGCTCCTGTTTCCGGAGGTGTTCCTGCTGCAGAAGCTGGGAAACTCACTTT 649 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 CATGGTA----------------------------------------------------- 645 consensus_11257#2 CATGGTA----------------------------------------------------- 655 consensus_11257#0 CATGGTATTCAATCCTTGCTTTTTCGTAACTTTGGTGTTATCACCAGGAATATACTTTGG 709 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ------------------------------------------------------------ consensus_11257#2 ------------------------------------------------------------ consensus_11257#0 TCGGACAGTTGCTACATTAGATGGAAGGATTTCTGTCTTATTTTGGTGCAAAGGAATGAT 769 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ---------GGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATG 696 consensus_11257#2 ---------GGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATG 706 consensus_11257#0 ATATAGGTAGGTGGTTCAGAAGAAGCATATCTAGCAGCAAAACCCTTACTTCTCTCAATG 829 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 GGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAAC 756 consensus_11257#2 GGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAAC 766 consensus_11257#0 GGCAAAAAAACAATATATTGTGGCGGGGCTGGAAATGGCTCGGTTGCAAAGATTTGTAAC 889 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 AACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAAT 816 consensus_11257#2 AACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAAT 826 consensus_11257#0 AACATGGCAATGGCCATCAGCATGCTTGGAGTCTCCGAAGCTTTTGCTCTTGGTCAGAAT 949 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 CTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGG 876 consensus_11257#2 CTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGG 886 consensus_11257#0 CTCGGCATCAAAGCTAGCGTTCTTACAGACATATTCAACTGCTCAAGTGCCCGCTGCTGG 1009 consensus_11257#3 ---------------------------GCTCCAAACTAATGACCAAAGATTTGGATTTGG 33 * * * * ** *** * *** consensus_11257#1 AGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAAC 936 consensus_11257#2 AGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAAC 946 consensus_11257#0 AGCAGTGACACATATAACCCAGTTCCTGGAGTAATGATGGATGTGCCATCATCGAGGAAC 1069 consensus_11257#3 --CCATGGCCTCTGCA-TCTGGAGTTGGCTTCAATTGTCCCTTTG--GTTCTCAGGCACT 88 * ** * * * * * * *** * * ** * ** * * consensus_11257#1 TATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCT 996 consensus_11257#2 TATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCT 1006 consensus_11257#0 TATGATGGTGGTTTCACCTCCAAACTAATGACCAAAGATTTGGATTTGGCCATGGCCTCT 1129 consensus_11257#3 TGAAATGTAATTTTTTTTGCCCGTTTTCTAAACCAAAACTTCTCCAGAACCATA----CT 144 * *** *** ** * * * * ** * ** **** ** consensus_11257#1 GCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAG 1056 consensus_11257#2 GCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAG 1066 consensus_11257#0 GCATCTGGAGTTGGCTTCAATTGTCCCTTTGGTTCTCAGGCACTTGAAATTTACCGAAAG 1189 consensus_11257#3 ATATTT---TCTCTGCTCAATCGTTGCACAACTAACATTAGTTTTTGCAGTTACCGAAAG 201 ** * * ***** ** * * ** * ********** consensus_11257#1 CTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCT 1116 consensus_11257#2 CTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCT 1126 consensus_11257#0 CTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCT 1249 consensus_11257#3 CTATGTGCTGATGGCTGTGAACTCAAGGACTTCTCATGTGCATTTCGCCACAACTATGCT 261 ************************************************************ consensus_11257#1 GGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAACAAA 1176 consensus_11257#2 GGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAA 1186 consensus_11257#0 GGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAA 1309 consensus_11257#3 GGCAAAGATGAAAATTGATCTTGTAGCTCTGCCACCTAACTTGCCACCTGTTAAAATAAA 321 ******************************************************** *** consensus_11257#1 TAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGT 1236 consensus_11257#2 TAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGT 1246 consensus_11257#0 TAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGT 1369 consensus_11257#3 TAAAGCAATAAAAAGTTGTGTGATTGAAGTGTACTCAGGCAAAGTTGGACTATCCTTTGT 381 ************************************************************ consensus_11257#1 AAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAG 1296 consensus_11257#2 AAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAG 1306 consensus_11257#0 AAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAG 1429 consensus_11257#3 AAAGTGAATTATCTTAATTGACGCCTTTCAGCCTGTAAAATCAAATCCATTGGCTCAAAG 441 ************************************************************ consensus_11257#1 CAAAGCTTTCTCTGACAAAAAAAAAAAAAAAAAAC-ACTGTCA----------------- 1338 consensus_11257#2 CAAAGCTTTCTCTGA--------------------------------------------- 1321 consensus_11257#0 CAAAGCTTTCTCTGACATTTGTACTAAATTGATTTTACTGAGGTATTGTCCCTCTTGTAT 1489 consensus_11257#3 CAAAGCTTTCTCTGACATTTGTACTAAAT------------------------------- 470 *************** consensus_11257#1 ------------------------------------------------------------ consensus_11257#2 ------------------------------------------------------------ consensus_11257#0 TTTCAGGGCTGTGTCAACATAAAGTGTACTCTTGCTGCATTCGGACCAAGTATTCCATAC 1549 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ------------------------------------------------------------ consensus_11257#2 ------------------------------------------------------------ consensus_11257#0 TATGTGTAACAATGTAATTAGACATAGGCATCAAGTTCTGTATGTATGATCAGAAAATGT 1609 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ------------------------------------------------------------ consensus_11257#2 ------------------------------------------------------------ consensus_11257#0 ACACCAAGGAGAGCCCTGTGCTGTTGTGCACATATTGACATATTGTACAAAGAAATGTAG 1669 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 ------------------------------------------------------------ consensus_11257#2 ------------------------------------------------------------ consensus_11257#0 CAATCGCATTGCCAAGCAAATGACTTGATGAATAAGAACATCAGATTTGGGAGAATAAAT 1729 consensus_11257#3 ------------------------------------------------------------ consensus_11257#1 --- consensus_11257#2 --- consensus_11257#0 GTA 1732 consensus_11257#3 --- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||