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Oryza sativa
cluster # 11266 cluster # 11266       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11266#0 length = 1512 sequences # 6  
consensus_11266#1 length = 692 sequences # 1  
consensus_11266#2 length = 664 sequences # 1  

consensusID : consensus_11266#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1512
fasta sequence
                              [GCACACGGAGCCAAGCAAAATGCTCGCCCTCCGCAAAACCCTCCTCCACGGCCGCCTCCCCGCCGCGCCGCCGGCCGCCGCCGCCGCCGCCATCGCGTCTAGGATCCCCGCCCTCCTCCGTCGCCTCTCCTCTTCTCCCGGAGACGGGCAGGGCGGGGACGAATGGGGCTCGTCCTGGTCCACCGGCATCACCAAGGAACACTTCGACGGCTCCGACGCCGCGGTCGGCCGCCCGGTCACCTCCCCGTCCAAGCCGGTCTCCCCTGAGCTTGCGGCCGTCCGGGCCATGGACGAGGAGGACGAGATCTTCCGCGCCATGGAGCGCGACAACAGGGAGGCCAAGGCGTACGTGGACTCGTGGGGCGACCGGATGCGGGAGACGTGCGAGCTGCTGAAGCAGGTGCGCGAGCCGGGCTCCCGGGGATCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCCCGAGACGTACACCGTGGAGCGCCTCGCCAAGGACTTCCGCGTCATGCGGCAGCGGGTGCACGCCATCCTGTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCTCGACGACTCCGTCGAGGTCCTCCTCGACAG-TTGCCCAGAG-TTTTTCAA-TTCCCATGATA-GGGAATTT-CATGTTGCATCACTTCCTTAT-AAACCTGACTTCAAAGTTATGCCTGAGGGCTGGGATGGCACAACCAGAGATCCTGATGAGGTTCTGTATGAGATTTCAATGAAGGAAGATCAGATGCTGTATGAGGAATTTGTTCAACGGTTACAGTTCAACAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTG-GCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTAGTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAATGCAAGTAAGGAAGTAGTCCATAATTAAGGTTGCTTGTAGCTGTGGATGGAAGGCCTAAAATACATTGGTGATCTTCCTAAGATACATTTGTGATCCGGGGAGATATGCTTTTCTGATTGTCTTAATAAAATCGTAGTG]

[+] EMBL AK073813             [GCACACGGAGCCAAGCAAAATGCTCGCCCTCCGCAAAACCCTCCTCCACGGCCGCCTCCCCGCCGCGCCGCCGGCCGCCGCCGCCGCCGCCATCGCGTCTAGGATCCCCGCCCTCCTCCGTCGCCTCTCCTCTTCTCCCGGAGACGGGCAGGGCGGGGACGAATGGGGCTCGTCCTGGTCCACCGGCATCACCAAGGAACACTTCGACGGCTCCGACGCCGCGGTCGGCCGCCCGGTCACCTCCCCGTCCAAGCCGGTCTCCCCTGAGCTTGCGGCCGTCCGGGCCATGGACGAGGAGGACGAGATCTTCCGCGCCATGGAGCGCGACAACAGGGAGGCCAAGGCGTACGTGGACTCGTGGGGCGACCGGATGCGGGAGACGTGCGAGCTGCTGAAGCAGGTGCGCGAGCCGGGCTCCCGGGGATCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCCCGAGACGTACACCGTGGAGCGCCTCGCCAAGGACTTCCGCGTCATGCGGCAGCGGGTGCACGCCATCCTGTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCTCGACGACTCCGTCGAGGTCCTCCTCGACAG TTGCCCAGAG TTTTTCAA TTCCCATGATA GGGAATTT CATGTTGCATCACTTCCTTAT AAACCTGACTTCAAAGTTATGCCTGAGGGCTGGGATGGCACAACCAGAGATCCTGATGAGGTTCTGTATGAGATTTCAATGAAGGAAGATCAGATGCTGTATGAGGAATTTGTTCAACGGTTACAGTTCAACAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTG GCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTAGTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAATGCAAGTAAGGAAGTAGTCCATAATTAAGGTTGCTTGTAGCTGTGGATGGAAGGCCTAAAATACATTGGTGATCTTCCTAAGATACATTTGTGATCCGGGGAGATATGCTTTTCTGATTGTCTTAATAAAATCGTAGTG]
[+] EMBL C73379               [                                                                                                                                                                                                                                                                                                                                AGCGCGACAACAGGGAGGCCAAGGCGTACGTGGACTCGTGGGGCGACCGGATGCGGGANACGTGCGACCTGCTGAAGCAGGTGCGCGA CCGGGCTCCCGGGGNTCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCCCGAGACGTACACCGTGGAGCGCCTCGCCAAGGACTTCCGCNTCATGCGGCAGCGGGTGCACGCCATCCTGTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCTCGACGACTTCTTCGAGGTCCTCCTCGACAGTTTCCCCAGAGTTTTTTCAATTTCCCATGATAGGGGAATTTNAATGTTNCATCAATTCCTTATAAAACTTGANTTTAAAGTTATNCCTTAGGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OS0813A              [                                                                                                                                                                                                                                                                                                                                                                                                CGAACTNCTGAAGCAGGTGCGCGACCTNGGCTCCCGGGGATCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCCCGAGACGTACACCGTGGAGCGCCTCGNCAAGGACTTNCGCGTCATNCGGCAGCGGGTGCACGCCATCCTTTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCTCGACGACTCCGT GAGGTCCTCCTCGACAN TTGCCCANAG TTTTTCAA TNTCCATGATA TGGNATTT CATGTTGCATCACTTCCTTAT A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU165675             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CGACGACTCCGTCAAGGTCCTCNTNGACAG TTGCCCAGAG TTTTTCAA TTCCCATGATA GGGAATTT CATGTTGCATCACTTCCTTAT AAACCTGACTTCAAAGTTATGCCTGAGGGCTGGGATGGCACAACCAGAGATCCTGATGAGGTTCTGTATGAGATTTCAATGAAGGAAGATCAGATGCTGTATGAGGAATTTGTTCAACGGTTACAGTTCAACAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATAaaaa                                                                                                                                                                                                                                                                          ]
[-] EMBL CA759824             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CTGGGATGGCACAACCAGAGATCCTGATGAGGTTCTGTATGAGATTTCAATGAAGGAAGATCAGATGCTGTATGAGGAATTTGTTCAACGGTTACAGTTCAACAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGANGACGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTG GCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTAGTCAATATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAATGCAAGTAAGGAAGTAGTCCATAATTAAaaaaaaaaa                                                                                                      ]
[-] EMBL AU225256             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTTTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTGAGCGgc                                                                                                                                                                                                                                                            ]


>consensus_11266#0 GCACACGGAGCCAAGCAAAATGCTCGCCCTCCGCAAAACCCTCCTCCACGGCCGCCTCCC CGCCGCGCCGCCGGCCGCCGCCGCCGCCGCCATCGCGTCTAGGATCCCCGCCCTCCTCCG TCGCCTCTCCTCTTCTCCCGGAGACGGGCAGGGCGGGGACGAATGGGGCTCGTCCTGGTC CACCGGCATCACCAAGGAACACTTCGACGGCTCCGACGCCGCGGTCGGCCGCCCGGTCAC CTCCCCGTCCAAGCCGGTCTCCCCTGAGCTTGCGGCCGTCCGGGCCATGGACGAGGAGGA CGAGATCTTCCGCGCCATGGAGCGCGACAACAGGGAGGCCAAGGCGTACGTGGACTCGTG GGGCGACCGGATGCGGGAGACGTGCGAGCTGCTGAAGCAGGTGCGCGAGCCGGGCTCCCG GGGATCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCC CGAGACGTACACCGTGGAGCGCCTCGCCAAGGACTTCCGCGTCATGCGGCAGCGGGTGCA CGCCATCCTGTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCT CGACGACTCCGTCGAGGTCCTCCTCGACAGTTGCCCAGAGTTTTTCAATTCCCATGATAG GGAATTTCATGTTGCATCACTTCCTTATAAACCTGACTTCAAAGTTATGCCTGAGGGCTG GGATGGCACAACCAGAGATCCTGATGAGGTTCTGTATGAGATTTCAATGAAGGAAGATCA GATGCTGTATGAGGAATTTGTTCAACGGTTACAGTTCAACAAGAAGAAGGTGGCAGGCGA GGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATGGATGGACCTACATGGTTGA GAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACC TGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCC AAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGT TTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCG TCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATT GTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTGGCGTA TCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGT AGTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAATGCAAGT AAGGAAGTAGTCCATAATTAAGGTTGCTTGTAGCTGTGGATGGAAGGCCTAAAATACATT GGTGATCTTCCTAAGATACATTTGTGATCCGGGGAGATATGCTTTTCTGATTGTCTTAAT AAAATCGTAGTG



consensusID : consensus_11266#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 692
fasta sequence
                              [TTTTTTTGAATTGCAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATAGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATTCACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTTTATATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTGTGCGTGGAACATGTTTGGCACGCAAGGGGAAGGTAGGCATGTACGCGTCACTAAACTTTGTTGCTCCCTGTCGTCACTATCAGTAACGTGACGGANAGGAGTTCTTTTTTTCCCCGTGGCATGGTGANCGCCATGCTTCTTGGTACAGCGTATCCCAGTTTGTGCTGGTTAGCACTACTCTAAGGCCATGAACAGTACTCGTAC]

[+] EMBL CA759825             [TTTTTTTGAATTGCAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCCCGACGATAGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATTCACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTTTATATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTGTGCGTGGAACATGTTTGGCACGCAAGGGGAAGGTAGGCATGTACGCGTCACTAAACTTTGTTGCTCCCTGTCGTCACTATCAGTAACGTGACGGANAGGAGTTCTTTTTTTCCCCGTGGCATGGTGANCGCCATGCTTCTTGGTACAGCGTATCCCAGTTTGTGCTGGTTAGCACTACTCTAAGGCCATGAACAGTACTCGTAC]


>consensus_11266#1 TTTTTTTGAATTGCAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGCC CGACGATAGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGG AGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGA GAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAA GTAACAAGAATTCACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTA TTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTC CTTTTGCAGCATAGGGAGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCC CCCTTTTATATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCG ATAACCTGTGCGTGGAACATGTTTGGCACGCAAGGGGAAGGTAGGCATGTACGCGTCACT AAACTTTGTTGCTCCCTGTCGTCACTATCAGTAACGTGACGGANAGGAGTTCTTTTTTTC CCCGTGGCATGGTGANCGCCATGCTTCTTGGTACAGCGTATCCCAGTTTGTGCTGGTTAG CACTACTCTAAGGCCATGAACAGTACTCGTAC



consensusID : consensus_11266#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 664
fasta sequence
                              [CNTGATAAGGTTCCGGTATGAAGATTTCAATGAAGGAAGATCCAGATGCTGTATGAGGAATTTGTTCAACGGGTTACAGTTCANCAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGACAGGACTAACACTGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTAGTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAAAAAAAAAAAAAA]

[+] EMBL AU093189             [CNTGATAAGGTTCCGGTATGAAGATTTCAATGAAGGAAGATCCAGATGCTGTATGAGGAATTTGTTCAACGGGTTACAGTTCANCAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGACAGGACTAACACTGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTAGTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAAAAAAAAAAAAAA]


>consensus_11266#2 CNTGATAAGGTTCCGGTATGAAGATTTCAATGAAGGAAGATCCAGATGCTGTATGAGGAA TTTGTTCAACGGGTTACAGTTCANCAAGAAGAAGGTGGCAGGCGAGGTGAAGTGTCATAA GTACAGCCGACGACGGGCCCGACGATGGATGGACCTACATGGTTGAGAAACTTGGAGCGC AGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGTTTACCTGATGGATCAAGCC GCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAGACTCCAAAACGGCGGAGGA GGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTTACCGTTTTGCAGGTTTTCT TAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGAAACCGTCTCAAGTTTTAAC CACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGACAGGACTAACACTGGTGGTTATTG TATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTATATTTGAACTGTTGGCGTAT CACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTGGGTTGCCAGGCAACTTGTA GTCAACATTTCATAAAATCACCTTTTGCAATGTGATGCACAGTTATGTTTAAAAAAAAAA AAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11266#0      GCACACGGAGCCAAGCAAAATGCTCGCCCTCCGCAAAACCCTCCTCCACGGCCGCCTCCC 60
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CGCCGCGCCGCCGGCCGCCGCCGCCGCCGCCATCGCGTCTAGGATCCCCGCCCTCCTCCG 120
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      TCGCCTCTCCTCTTCTCCCGGAGACGGGCAGGGCGGGGACGAATGGGGCTCGTCCTGGTC 180
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CACCGGCATCACCAAGGAACACTTCGACGGCTCCGACGCCGCGGTCGGCCGCCCGGTCAC 240
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CTCCCCGTCCAAGCCGGTCTCCCCTGAGCTTGCGGCCGTCCGGGCCATGGACGAGGAGGA 300
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CGAGATCTTCCGCGCCATGGAGCGCGACAACAGGGAGGCCAAGGCGTACGTGGACTCGTG 360
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      GGGCGACCGGATGCGGGAGACGTGCGAGCTGCTGAAGCAGGTGCGCGAGCCGGGCTCCCG 420
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      GGGATCCTACCTCAAGGACTCGGAGAAGCAGGAGATGTACCGGCTGCACAAGGAGGACCC 480
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CGAGACGTACACCGTGGAGCGCCTCGCCAAGGACTTCCGCGTCATGCGGCAGCGGGTGCA 540
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CGCCATCCTGTGGCTCAAGGAGATGGAGGAAGAGGAGGAGAGGAAGCTGGGCAAGCCGCT 600
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      CGACGACTCCGTCGAGGTCCTCCTCGACAGTTGCCCAGAGTTTTTCAATTCCCATGATAG 660
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      GGAATTTCATGTTGCATCACTTCCTTATAAACCTGACTTCAAAGTTATGCCTGAGGGCTG 720
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      GGATGGCACAACCAGAGATCCTGATGAGGTTCTG-TATGA-GATTTCAATGAAGGAAGAT 778
consensus_11266#2      -------------------CNTGATAAGGTTCCGGTATGAAGATTTCAATGAAGGAAGAT 41
consensus_11266#1      ------------------------------------------------------------
                                                                                   

consensus_11266#0      C-AGATGCTGTATGAGGAATTTGTTCAACGG-TTACAGTTCAACAAGAAGAAGGTGGCAG 836
consensus_11266#2      CCAGATGCTGTATGAGGAATTTGTTCAACGGGTTACAGTTCANCAAGAAGAAGGTGGCAG 101
consensus_11266#1      -------------------------------------TTTTTTTGAATTGCAGGTGGCAG 23
                                                             **     *   * *********

consensus_11266#0      GCGAGGTGAAGTGTCATAAGTACAGCCGACGACGG-CCCGACGATGGATGGACCTACATG 895
consensus_11266#2      GCGAGGTGAAGTGTCATAAGTACAGCCGACGACGGGCCCGACGATGGATGGACCTACATG 161
consensus_11266#1      GCGAGGTGAAGTGTCATAAGTACAGCCGACGACGG-CCCGACGATAGATGGACCTACATG 82
                       *********************************** ********* **************

consensus_11266#0      GTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGT 955
consensus_11266#2      GTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGT 221
consensus_11266#1      GTTGAGAAACTTGGAGCGCAGTCAAAGCGGGGCTCTGGAGGTGGCTGGAAGTTCGCCAGT 142
                       ************************************************************

consensus_11266#0      TTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAG 1015
consensus_11266#2      TTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAG 281
consensus_11266#1      TTACCTGATGGATCAAGCCGCCCACTAAACGATATGGAGAAGATGTATGTGAAGAGGGAG 202
                       ************************************************************

consensus_11266#0      ACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTT 1075
consensus_11266#2      ACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATACACTCTACTT 341
consensus_11266#1      ACTCCAAAACGGCGGAGGAGGATAATGGCACCCTTCAAGTAACAAGAATTCACTCTACTT 262
                       ************************************************* **********

consensus_11266#0      ACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGA 1135
consensus_11266#2      ACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGA 401
consensus_11266#1      ACCGTTTTGCAGGTTTTCTTAACACTCTTTTGGCATTATTCAGGAAAGCAGAAATACTGA 322
                       ************************************************************

consensus_11266#0      AACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGA----- 1190
consensus_11266#2      AACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGACAGGA 461
consensus_11266#1      AACCGTCTCAAGTTTTAACCACCAGTGTTGGTCCTGTCCTTTTGCAGCATAGGGA----- 377
                       *******************************************************     

consensus_11266#0      --------GGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTAT 1242
consensus_11266#2      CTAACACTGGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTCTAT 521
consensus_11266#1      --------GGTGGTTATTGTATTCATGTCATTTGTAGCAAGTTCCGTTGCCCCCTTTTAT 429
                               ************************************************ ***

consensus_11266#0      ATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTG 1302
consensus_11266#2      ATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTTG 581
consensus_11266#1      ATTTGAACTGTTGGCGTATCACCATCACCTCATTGCCAGGCAGCACACTCGATAACCTGT 489
                       **********************************************************  

consensus_11266#0      GGTTGCCAGGCAACTTGTAGTCAAC---ATTTCATAAAATCACCTTTTGCAA---TGTGA 1356
consensus_11266#2      GGTTGCCAGGCAACTTGTAGTCAAC---ATTTCATAAAATCACCTTTTGCAA---TGTGA 635
consensus_11266#1      GCGTGGAACATGTTTGGCACGCAAGGGGAAGGTAGGCATGTACGCGTCACTAAACTTTGT 549
                       *  **  *      * * *  ***    *    *   *   **   *  * *   * ** 

consensus_11266#0      TGCACAGTTATGTTTAATGCAAGTAAGGAAGTAGTCCATAATTAAGGTTGCTTGTAGCTG 1416
consensus_11266#2      TGCACAGTTATGTTTAAAAAAAAAAAAAA------------------------------- 664
consensus_11266#1      TGCTCC-CTGTCGTCACTATCAGTAACGTGACGGANAGGAGTTCTTTTTTTCCCCGTGGC 608
                       *** *   * *  * *     *  **                                  

consensus_11266#0      TGGATGGAAGGCCTAAAATACATTGGTGATCTTCCTAAGATACATTTGTGATCCGGGGAG 1476
consensus_11266#2      ------------------------------------------------------------
consensus_11266#1      ATGGTGANCGCCATGCTTCTTGGTACAGCGTATCCCAGTTTGTGCTGGTTAGCACTACTC 668
                                                                                   

consensus_11266#0      ATATGCTTTTCTGATTGTCTTAATAAAATCGTAGTG 1512
consensus_11266#2      ------------------------------------
consensus_11266#1      TAAGGCCATGAACAGTACTCGTAC------------ 692
                                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)