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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11274#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2756 fasta sequence
[AGGCCCTTTAAGCGTAAGCGCGAGGAGAGAGCGGATCAAACAAACGAAACAAAACAAACGCTCGCACCGAACTCGAATTTCCTCCGCGTTGCCCTCGCCCTCGCCCTCGCCGCCTCGAATCCTCCCTCGCCGCCGGGGGTATCCCCCGTTGGCCCGCCTCTCCGATCCGAGCCTGATCGGAGGAGTCCCGCGCCGCCGCAGCTGGTGGATGCGTGCGTGCCGCTAGCTGCAGATCTCCTCCTCTCCCGGCGACGAGCGTCTAGGCCCGTGTGGATGTGACTAAGTATCGGATCAGCGATCTTTGAGAAAAATACAGAGTGAGAAGTCTGATCGTCTGAGGGTGCATTTGTGGAGAATGTCAGAGAGCAATGTCGACGGCATCGAAATATCATCTATCAACGATGAGAGGAGGGACAGAGGGGACGCTGAGATTTCAGAGGATGAGCCAAGGCAGACGAGGATACGGTCGTTGAAGAAGAAGGCGCTGCATGCATCTACGAGGCTGACGCATTCGCTGAAGAAGAGAGGGAAGAGGAAAGTGGGCTGCATAGTGCCTAAGATCACAATAGAGGATGTCACGGACGCGGAGGAGGAGCAGGCTGTCAGCTCTTTTCGAGAGGTTTTGTTTGCCAGGGACATGCTGCCTGAGAGGCATGACGATTATCACACGATGCTTAGATTCTTGAAAGCTAGGAAATTTGATGTTGAAAAGGCAGCACATATGTGGGCTGACATGCTGCACTGGAGGAAGGATTTCGGGACTGACACAATTTTGGAAGATTTTGAATTTCATGAGCTAGAGGAGGTGCTGCAGTATTATCCCCATGGTTATCATGGTGTTGACAAGGAAGGAAGGCCCGTCTATATCGAGTTGCTTGGGAAAGTTGAACCCAGTAAGCTTGTACAAATTACAACAGTGGAACGCTATATTAAATATCATGTACAGGAATTTGAGAGAGCATTCCGAGAGAAGTTTCCTGCATGCTCAATTGCTGCTAAAAAGCATATTGATACGACAACTACAATACTGGATGTCCACGGTGTGGGTTGGAAGAACTTTAGCAAGATCGCAAGGGATTTGGTGCGCTGTATGCAGAAAATAGATGGTGATTATTATCCTGAGACACTACATCAAATGTTCATTGTAAATGCGGGGCCTGGTTTTAAACTGATCTGGAGTACTGTGAAGGGACTTCTTGACCCCAAAACCTCGTCTAAAATCCATGTTCTAGGAACAAAATACCAACACAGACTTCTTGAAGCTATTGACTCAAGCCAACTACCAGAGTTTCTTGGTGGTTCTTGCACGTGCTCTAGCCAGGGAGGATGCCTGCGATCCAACAAAGGCCCCTGGAGTGATCCTTTAATTATGAAGCTTGTACATTGCATGGAATCATCTGCGTTGAAGGACATTGGCCAAGTATCTGATATAGAAGAAGCAATTACAGGCTCTGTAAGATTGCGTGCTCTCAAGTTACCAGAAAGAATTAGTTATACATCAAATGCTGAATCTGGTTCAGATGTTGATGATCTTGGATCTCCTATAGGACAGGAAGATTTTGAGTATCATAGTTTGGCTCCAGTTCATGAGGAGGCCAGGGAGTCAGGATCAACATGCAGTGGTTCTGATGATAAAGTTGTTGAGACGAATACAAGATACAACCCTCCTGGAAATGGATCGGGACAGTACAGCGCAAGACAAAATCCCTCAATAAACAGAGTTTCGCCTGAGCCAGCAGGTCACGTCCCAAATGATGGTGAAGGAAATGCAGATCATGGGATCTTGAAATATATTTCTAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCTAGAGATTCCACAGGATAAGGATCGTGCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAGAAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGCATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGTCTATCAAAAAACCGAGCAAATCTTACTCTGAATAAGTACAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTCAAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTATAATAGTCCAAAAGGGATATTCTAAAAGAGCCAATGCACAGCTTATTTATGTTCCATCGAGCCTCCTGATCTGCTGTATGCATCTCATCAATGCCTTGTGCATTTTTCATTTTCAGAACAGTTTGAGGCAATGGGCCGGAATTCATAGTTCTTCATACCCTTTTTTTGGTTGATATGGTCAATACATGATCAGGTTTTTCATTGCTTTGCCTCCCTTCAAATGTAAAGTGTAAATATATGACTGCACTGCTTGCTGCTGCAAGATACTTATACCAGATTGACATGGTGAAACGGCCAATAAATGCCAAAATTTACCGTT]
[+] EMBL CB677150 [AGGCCCTTTAAGCGTAAGCGCGAGGAGAGAGCGGATCAAACAAACGAAACAAAACAAACGCTCGCACCGAACTCGAATTTCCTCCGCGTTGCCCTCGCCCTCGCCCTCGCCGCCTCGAATCCTCCCTCGCCGCCGGGGGTATCCCCCGTTGGCCCGCCTCTCCGATCCGAGCCTGATCGGAGGAGTCCCGCGCCGCCGCAGCTGGTGGATGCGTGCGTGCCGCTAGCTGCAGATCTCCTCCTCTCCCGGCGACGAGCGTCTAGGCCCGTGTGGATGTGACTAAGTATCGGATCAGCGATCTTTGAGAAAAATACAGAGTGAGAAGTCTGATCGTCTGAGGGTGCATTTGTGGAGAATGTCAGAGAGCAATGTCGACGGCATCGAAATATCATCTATCAACGATGAGAGGAGGGACAGAGGGGACGCTGAGATTTCAGAGGATGAGCCAAGGCAGACGAGGATACGGTCGTTGAAGAAGAAGGCGCTGCATGCATCTACGAGGCTGACGCATTCGCTGAAGAAGAGAGGGAAGAGGAAAGTGGGCTGCATAGTGCCTAAGATCACAATAGAGGATGTCACGGACGCGGAGGAGGAGCAGGCT ]
[+] EMBL AK100043 [ GTAAGCGCGAGGAGAGAGCGGATCAAACAAACGAAACAAAACAAACGCTCGCACCGAACTCGAATTTCCTCCGCGTTGCCCTCGCCCTCGCCCTCGCCGCCTCGAATCCTCCCTCGCCGCCGGGGGTATCCCCCGTTGGCCCGCCTCTCCGATCCGAGCCTGATCGGAGGAGTCCCGCGCCGCCGCAGCTGGTGGATGCGTGCGTGCCGCTAGCTGCAGACCTCCTCCTCTCCCGGCGACGAGCGTCTAGGCCCGTGTGGTTGTGACTAAGTATCGGATCAGCGATCTTTGAGAAAAATACAGAGTGAGAAGTCTGATCGTCTGAGGGTGCATTTGTGGAGAATGTCAGAGAGCAATGTCGACGGCATCGAAATATCAGCTAGTAACGATGAGAGGAGGGACAGAGGGGACGCTGAGATTTCGGAGGATGAGCCAAGGCAGACGAGGATACGGTCGTTGAAGAAGAAGGCGCTGCATGCATCTACGAGGCTGACGCATTCGCTGAAGAAGAGAGGGAAGAGGAAAGTGGGCTGCAGAGTGCCGAAGATCACGATAGAGGATGTCAGGGACGCGGAGGAGGAGCAGGCTGTCAGCTCTTTTCGAGAGGTTTTGTTTGCCAGGGACATGCTGCCTGAGAGGCATGACGATTATCACACGATGCTTAGATTCTTGAAAGCTAGGAAATTTGATGTTGAAAAGGCAGCACATATGTGGGCTGACATGCTGCACTGGAGGAAGGATTTCGGGACTGACACAATTTTGGAAGATTTTGAATTTCATGAGCTAGAGGAGGTGCTGCAGTATTATCCCCATGGTTATCATGGTGTTGACAAGGAAGGAAGGCCCGTCTATATCGAGTTGCTTGGGAAAGTTGAACCCAGTAAGCTTGTACAAATTACAACAGTGGAACGCTATATTAAATATCATGTACAGGAATTTGAGAGAGCATTCCGAGAGAAGTTTCCTGCATGCTCAATTGCTGCTAAAAAGCATATTGATACGACAACTACAATACTGGATGTCCACGGTGTGGGTTGGAAGAACTTTAGCAAGATCGCAAGGGATTTGGTGCGCTGTATGCAGAAAATAGATGGTGATTATTATCCTGAGACACTACATCAAATGTTCATTGTAAATGCGGGGCCTGGTTTTAAACTGATCTGGAGTACTGTGAAGGGACTTCTTGACCCCAAAACCTCGTCTAAAATCCATGTTCTAGGAACAAAATACCAACACAGACTTCTTGAAGCTATTGACTCAAGCCAACTACCAGAGTTTCTTGGTGGTTCTTGCACGTGCTCTAGCCAGGGAGGATGCCTGCGATCCAACAAAGGCCCCTGGAGTGATCCTTTAATTATGAAGCTTGTACATTGCATGGAATCATCTGCGTTGAAGGACATTGGCCAAGTATCTGATATAGAAGAAGCAATTACAGGCTCTGTAAGATTGCGTGCTCTCAAGTTACCAGAAAGAATTAGTTATACATCAAATGCTGAATCTGGTTCAGATGTTGATGATCTTGGATCTCCTATAGGACAGGAAGATTTTGAGTATCATAGTTTGGCTCCAGTTCATGAGGAGGCCAGGGAGTCAGGATCAACATGCAGTGGTTCTGATGATAAAGTTGTTGAGACGAATACAAGATACAACCCTCCTGGAAATGGATCGGGACAGTACAGCGCAAGACAAAATCCATCAATAAACAGAGTTTCGCCTGAGCCAGCAGGTCACGTCCCAAATGATGGTGAAGGAAATGCAGATCATGGGATCTTGAAATATATTTCTAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCTAGAGATTCCACAGGATAAGGATCGTGCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAGAAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGCATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGTCTATCAAAAAACCGAGCAAATCTTACTCTGAATAAGTACAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTCAAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTATAATAGTCCAAAAGGGATATTCTAAAAGAGCCAATGCACAGCTTATTTATGTTCCATCGAGCCTCCTGATCTGCTGTATGCATCTCATCAATGCCTTGTGCATTTTTCATTTTCAGAACAGTTTGAGGCAATGGGCCGGAATTCATAGTTCTTCATACCCTTTTTTTGGTTGATATGGTCAATACATGATCAGGTTTTTCATTGCTTTGCCTCCCTTCAAATGTAAAGTGTAAATATATGACTGCACTGCTTGCTGCTGCAAGATACTTATACCAGATTGACATGGTGAAACGGCCAATAAATGCCAAAA ]
[+] EMBL CB635497 [ AGGCCGTGCAGGCTGTCAGCTCTTTTCGAGAGGTTTTGTTTGCCAGGGACATGCTGCCTGAGAGGCATGACGATTATCACACGATGCTTAGATTCTTGAAAGCTAGGAAATTTGATGTTGAAAAGGCAGCACATATGTGGGCTGACATGCTGCACTGGAGGAAGGATTTCGGGACTGACACAATTTTGGAAGATTTTGAATTTCATGAGCTAGAGGAGGTGCTGCAGTATTATCCCCATGGTTATCATGGTGTTGACAAGGAAGGAAGGCCCGTCTATATCGAGTTGCTTGGGAAAGTTGAACCCAGTAAGCTTGTACAAATTACAACAGTGGAACGCTATATTAAATATCATGTACAGGAATTTGAGAGAGCATTCCGAGAGAAGTTTCCTGCATGCTCAATTGCTGCTAAAAAGCATATTGATACGACAACTACAATACTGGATGTCCACGGTGTGGGTTGGAAGAACTTTAGCAAGATCGCAAGGGATTTGGTGCGCTGTATGCAGAAAATAGATGGTGATTATTATCCTGAGACACTACATCAAATGTTCATTGTAAATGCGGGGCCTGGTTTTAAACTGATCTGGAGTACTGTGAAGGGACTTCTTGACCCCAAAACCTCGTCTAAAATCCATGTTCTAGGAACAAAATACCAACACAGACTTCTTGAAGCTATTGACTCAAGCCAACTACCAGAGTTTCTTGGTGGTTCTTGCACGTGCTCTAGCCAGGGAGGATGCCTGCGATCCAACAAAGGCCCCTGGAGTGATCCTTTAATTATGAAGCTTG ]
[+] EMBL CF304053 [ CTGCGTTGAAGGACATTGGCCAAGTATCTGATATAGAAGAAGCAATTACAGGCTCTGTAAGATTGCGTGCTCTCAAGTTACCAGAAAGAATTAGTTATACATCAAATGCTGAATCTGGTTCAGATGTTGATGATCTTGGATCTCCTATAGGACAGGAAGATTTTGAGTATCATAGTTTGGCTCCAGTTCATGAGGAGGCCAGGGAGTCAGGATCAACATGCAGTGGTTCTGATGATAAAGTTGTTGAGACGAATACAAGATACAACCCTCCTGGAAATGGATCGGGACAGTACAGCGCAAGACAAAATCCCTCAATAAACAGAGTTTCGCCTGAGCCAGCAGGTCACGTCCCAAATGATGGTGAAGGAAATGCAGATCATGGGATCTTGAAATATATTTCTAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAAT ]
[+] EMBL CA998820 [ ACCCTCCTGGAAATGGATCGGGACAGTACAGCGCAAGACAAAATCCCTCAATAAACAGAGTTTCGCCTGAGCCAGCAGGTCACGTCCCAAATGATGGTGAAGGAAATGCAGATCATGGGATCTTGAAATATATTTCTAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAATCAGCTCAGCAG ]
[-] EMBL CB677151 [ CCTCCAGAGATTCCACAGGATAAGGATCGTGCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAGAAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGCATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGTCTATCAAAAAACCGAGCAAATCTTACTCTGAATAAGTACAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTCAAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTATAATAGTCCAAAAGGGATATTCTAAAAGAGCCAATGCACAGCTTATTTATGTTCCATCGAGCCTCCTGATCTGCTGTATGCATCTCATCAATGCCTTGTGCATTTTTCATTTTCAGAACAGTTTGAGGCAATGGGCCGGAATTCATAGTTCTTCATACCCTTTTTTTGGTTGATATGGTCAATACATGATCAGGTTTTTCATTGCTTTGCCTCCCTTCAAATGTAAAGTGTAAATATATGACTGCACTGCTTGCTGCTGCAAGATACTTATACCAGATTGACATGGGGAAACGGCCAATAAATGCCAAAATTTACCGTT]
consensusID : consensus_11274#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 867 fasta sequence
[ACGAGACAAGGGGGGATCTTGAAATATATTTCTAAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCCAGAGATTCCACAGGATAAGGATCGTGCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAGAAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGATGACTTACTAATGCCGGCATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTGGTCTATCAAAAAACCGAGCAAATCTTACTGTGAATAAGTNCAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTCAAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTTATAATAGTNCAAAANGGATATTTCTAAAAGAGNCAATGCNCAGCTTATTTATGNTTNCATCCGAGCCCTCCTGATCTGCTGGGGGCATTCTCATTCAATGGCCTTTGGGCATTTTTTCATTTTTCAAAAACAGTTTTGAGGGCAATGGGGCCCGGGAATTTCNAAAAGGTTCNTNCATACCCCTTTTTTTTGGGN]
[+] EMBL CA763937 [ACGAGACAAGGGGGGATCTTGAAATATATTTCTAAAAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATCGACAACAGTTGGAAAATGTCCCCCAGCATACTACAACAGTGCACAGTAATCAGGCAGATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTTGAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCCAGAGATTCCACAGGATAAGGATCGTGCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAGAAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGATGACTTACTAATGCCGGCATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTGGTCTATCAAAAAACCGAGCAAATCTTACTGTGAATAAGTNCAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTCAAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTTATAATAGTNCAAAANGGATATTTCTAAAAGAGNCAATGCNCAGCTTATTTATGNTTNCATCCGAGCCCTCCTGATCTGCTGGGGGCATTCTCATTCAATGGCCTTTGGGCATTTTTTCATTTTTCAAAAACAGTTTTGAGGGCAATGGGGCCCGGGAATTTCNAAAAGGTTCNTNCATACCCCTTTTTTTTGGGN]
consensusID : consensus_11274#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence
[CAGGCTTGCAATTATACTAACCTGCCATACGTAAATCCTTCTATGGGTCAGATCCTAGGAGTCTACTAGAGTGGGCATGTTAATATATAGTTGTTTGCTTGGGTGTAGTGCATACTGAAGTTATAATTCATTGGATATGTGTTCATTACCTTTTTGCAGTTTAGCTGATAATATTAGCTTCCTTTGTTGTTGTATTTCATTGTTCGTCTATTTATATGTGATGTTTTTGAATTTGTTTGTTCAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGGATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGCCTATCAGAAAACCGAGCAAATCTTACTCTGAATAAGTACAGAGTGGCGACCCGAGGCAAACTGAGAAGATAGCCCAGAAAGACCGTGCTGGAAGGCACTTAACATAGCCCAGCTTATAAATAGGCCAAAGGGA]
[+] EMBL CA753935 [CAGGCTTGCAATTATACTAACCTGCCATACGTAAATCCTTCTATGGGTCAGATCCTAGGAGTCTACTAGAGTGGGCATGTTAATATATAGTTGTTTGCTTGGGTGTAGTGCATACTGAAGTTATAATTCATTGGATATGTGTTCATTACCTTTTTGCAGTTTAGCTGATAATATTAGCTTCCTTTGTTGTTGTATTTCATTGTTCGTCTATTTATATGTGATGTTTTTGAATTTGTTTGTTCAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTAAAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACAGGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGGATTCCAACATAAAACTAAACTTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGCCTATCAGAAAACCGAGCAAATCTTACTCTGAATAAGTACAGAGTGGCGACCCGAGGCAAACTGAGAAGATAGCCCAGAAAGACCGTGCTGGAAGGCACTTAACATAGCCCAGCTTATAAATAGGCCAAAGGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11274#0 AGGCCCTTTAAGCGTAAGCGCGAGGAGAGAGCGGATCAAACAAACGAAACAAAACAAACG 60
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CTCGCACCGAACTCGAATTTCCTCCGCGTTGCCCTCGCCCTCGCCCTCGCCGCCTCGAAT 120
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CCTCCCTCGCCGCCGGGGGTATCCCCCGTTGGCCCGCCTCTCCGATCCGAGCCTGATCGG 180
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AGGAGTCCCGCGCCGCCGCAGCTGGTGGATGCGTGCGTGCCGCTAGCTGCAGATCTCCTC 240
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CTCTCCCGGCGACGAGCGTCTAGGCCCGTGTGGATGTGACTAAGTATCGGATCAGCGATC 300
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TTTGAGAAAAATACAGAGTGAGAAGTCTGATCGTCTGAGGGTGCATTTGTGGAGAATGTC 360
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AGAGAGCAATGTCGACGGCATCGAAATATCATCTATCAACGATGAGAGGAGGGACAGAGG 420
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGACGCTGAGATTTCAGAGGATGAGCCAAGGCAGACGAGGATACGGTCGTTGAAGAAGAA 480
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGCGCTGCATGCATCTACGAGGCTGACGCATTCGCTGAAGAAGAGAGGGAAGAGGAAAGT 540
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGGCTGCATAGTGCCTAAGATCACAATAGAGGATGTCACGGACGCGGAGGAGGAGCAGGC 600
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TGTCAGCTCTTTTCGAGAGGTTTTGTTTGCCAGGGACATGCTGCCTGAGAGGCATGACGA 660
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TTATCACACGATGCTTAGATTCTTGAAAGCTAGGAAATTTGATGTTGAAAAGGCAGCACA 720
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TATGTGGGCTGACATGCTGCACTGGAGGAAGGATTTCGGGACTGACACAATTTTGGAAGA 780
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TTTTGAATTTCATGAGCTAGAGGAGGTGCTGCAGTATTATCCCCATGGTTATCATGGTGT 840
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TGACAAGGAAGGAAGGCCCGTCTATATCGAGTTGCTTGGGAAAGTTGAACCCAGTAAGCT 900
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TGTACAAATTACAACAGTGGAACGCTATATTAAATATCATGTACAGGAATTTGAGAGAGC 960
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 ATTCCGAGAGAAGTTTCCTGCATGCTCAATTGCTGCTAAAAAGCATATTGATACGACAAC 1020
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TACAATACTGGATGTCCACGGTGTGGGTTGGAAGAACTTTAGCAAGATCGCAAGGGATTT 1080
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGTGCGCTGTATGCAGAAAATAGATGGTGATTATTATCCTGAGACACTACATCAAATGTT 1140
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CATTGTAAATGCGGGGCCTGGTTTTAAACTGATCTGGAGTACTGTGAAGGGACTTCTTGA 1200
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CCCCAAAACCTCGTCTAAAATCCATGTTCTAGGAACAAAATACCAACACAGACTTCTTGA 1260
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AGCTATTGACTCAAGCCAACTACCAGAGTTTCTTGGTGGTTCTTGCACGTGCTCTAGCCA 1320
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGGAGGATGCCTGCGATCCAACAAAGGCCCCTGGAGTGATCCTTTAATTATGAAGCTTGT 1380
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 ACATTGCATGGAATCATCTGCGTTGAAGGACATTGGCCAAGTATCTGATATAGAAGAAGC 1440
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AATTACAGGCTCTGTAAGATTGCGTGCTCTCAAGTTACCAGAAAGAATTAGTTATACATC 1500
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AAATGCTGAATCTGGTTCAGATGTTGATGATCTTGGATCTCCTATAGGACAGGAAGATTT 1560
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TGAGTATCATAGTTTGGCTCCAGTTCATGAGGAGGCCAGGGAGTCAGGATCAACATGCAG 1620
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TGGTTCTGATGATAAAGTTGTTGAGACGAATACAAGATACAACCCTCCTGGAAATGGATC 1680
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGGACAGTACAGCGCAAGACAAAATCCCTCAATAAACAGAGTTTCGCCTGAGCCAGCAGG 1740
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TCACGTCCCAAATGATGGTGAAGGAAATGCAGATCATGGGATCTTGAAATATATTTCTAA 1800
consensus_11274#1 ---------------------ACGAGACAAGGG----GGGATCTTGAAATATATTTCTAA 35
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AAAA-GTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATC 1859
consensus_11274#1 AAAAAGTTCTCGGTGTAATTCTTGAAGTACTCTCTTTTTTGCGTATTTTCATCCGTCATC 95
consensus_11274#2 -------------------------------CAGGCTTGCAATTATACTAACCTGCCATA 29
* ** *** * * * * ***
consensus_11274#0 GACAACAGTTGGAAAATGTC---CCCCAGCATACTACAACAGTGCACA-GTAATCAGGCA 1915
consensus_11274#1 GACAACAGTTGGAAAATGTC---CCCCAGCATACTACAACAGTGCACA-GTAATCAGGCA 151
consensus_11274#2 CGTAAATCCTTCTATGGGTCAGATCCTAGGAGTCTACTAGAGTGGGCATGTTAATATATA 89
** * * *** ** ** * **** * **** ** ** * * *
consensus_11274#0 GATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTT 1975
consensus_11274#1 GATCTTCAGATAATTAAGGAAGATCGTGTAAATCCTTGTCTAGAGCGTCTTGAAAGACTT 211
consensus_11274#2 GTTGTTTGCTTGGGTGTAGTGCATACTG-AAGTTATAATTCA-------TTGGATATGTG 141
* * ** * * * ** ** ** * * * * *** * *
consensus_11274#0 GAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCTAGAGATTCCACAGGATAAGGATCGT 2035
consensus_11274#1 GAGACAATGTTTAATCAGCTCAGCAGAAAGCCTCCAGAGATTCCACAGGATAAGGATCGT 271
consensus_11274#2 TTCATTACCTTTTTGCAGTTTAGCTGATAATATT---AGCTTCCTTTGTTGTTGTATTTC 198
* * *** *** * *** ** * * ** **** * * **
consensus_11274#0 GCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAG 2095
consensus_11274#1 GCTATACAGGATTCTTTTGACAGGATAAAGTGCATTGAATTTGATCTGGAGAAGACAAAG 331
consensus_11274#2 ATTGTTCG----TCTATTTATATG-TGATGTTT-TTGAATTTGTTT-----------GTT 241
* * * *** ** * * * * * ** ********* *
consensus_11274#0 AAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTA 2155
consensus_11274#1 AAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTA 391
consensus_11274#2 CAGGTATTGCATGCAACAGTGATTAGACAAATGCAGATGGCTGAGACATTGGAAGCTGTA 301
***********************************************************
consensus_11274#0 AAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACA 2215
consensus_11274#1 AAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACA 451
consensus_11274#2 AAGGAGTCCGATCTTAGGAGAAGAAAATTTTGTACATAATAAACTTAGCAGCAATGTACA 361
************************************************************
consensus_11274#0 GGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGCATTCCAACATAAAACTAAAC 2275
consensus_11274#1 GGAACAAGAAAAGAAGAGTCGATGACTTACTAATGCCGGCATTCCAACATAAAACTAAAC 511
consensus_11274#2 GGAACAAGAAAAGAAGAGTCGACGACTTACTAATGCCGGGATTCCAACATAAAACTAAAC 421
********************** **************** ********************
consensus_11274#0 TTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGTCTATCAAAAAACCG 2335
consensus_11274#1 TTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTT-GGTCTATCAAAAAACCG 570
consensus_11274#2 TTCATTGCTTTGTACATGGTTACCCTTTTCTCACTTTTTTTTTGGCCTATCAGAAAACCG 481
****************************************** ** ****** *******
consensus_11274#0 AGCAAATCTTACTCTGAATAAGTACAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTC 2395
consensus_11274#1 AGCAAATCTTACTGTGAATAAGTNCAGAGTGGTGACCCGAGGCAAACTGAGAAGATAGTC 630
consensus_11274#2 AGCAAATCTTACTCTGAATAAGTACAGAGTGGCGACCCGAGGCAAACTGAGAAGATAGCC 541
************* ********* ******** ************************* *
consensus_11274#0 AAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTT-ATAATAGTCCAAAAGGGA 2454
consensus_11274#1 AAGAAAGACCGTGCTGGAAGTCACTTAACATAGTCCAGCTTTATAATAGTNCAAAANGGA 690
consensus_11274#2 CAGAAAGACCGTGCTGGAAGGCACTTAACATAGCCCAGCTTATAAATAGGCCAAAGGGA- 600
******************* ************ ******* ***** **** *
consensus_11274#0 TATT-CTAAAAGAGCCAATGCACAGCTTATTTATGTT-CCATC-GAGCC-TCCTGATCTG 2510
consensus_11274#1 TATTTCTAAAAGAGNCAATGCNCAGCTTATTTATGNTTNCATCCGAGCCCTCCTGATCTG 750
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 CTGTATGCAT-CTCAT-CAATG--CCTTGTGCATTTTT-CATTTTC--AGAACAGTTT-- 2561
consensus_11274#1 CTGGGGGCATTCTCATTCAATGGCCTTTGGGCATTTTTTCATTTTTCAAAAACAGTTTTG 810
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GAGGCAATGGGCC---GGAATTCATAG-----TTCTTCATACCCTTTTTTTGGTTGATAT 2613
consensus_11274#1 AGGGCAATGGGGCCCGGGAATTTCNAAAAGGTTCNTNCATACCCCTTTTTT--TTGGGN- 867
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 GGTCAATACATGATCAGGTTTTTCATTGCTTTGCCTCCCTTCAAATGTAAAGTGTAAATA 2673
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 TATGACTGCACTGCTTGCTGCTGCAAGATACTTATACCAGATTGACATGGTGAAACGGCC 2733
consensus_11274#1 ------------------------------------------------------------
consensus_11274#2 ------------------------------------------------------------
consensus_11274#0 AATAAATGCCAAAATTTACCGTT 2756
consensus_11274#1 -----------------------
consensus_11274#2 -----------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||