These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11275#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1396 fasta sequence [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC-GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT-GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG-AATTTCAGA-GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT-CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA] [+] EMBL AK061165 [AAAAAGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGGTGGTCGGTGAGGTGACAAGTACGGCTCCTAATGCAGATTTGGACCAACCTACCGAGGCCAATGCCAGCCCCACTACTGGCCGTGTTTATGTCAGCAAGGCTCATGATGTCATGACAACTGTGATTGCAAGGGGTTCAGCAATGCGACAAGATGCTGTGAACAAAGCTAAAGCATTCGATGAGAAACATCAATTGAGGGCAAATGCATCGGCCAAGATCAATTCCTTTGATAAGCGTGTTGG AATTTCAGA GAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAtgtt ] [+] EMBL CF276901 [ AGAAAACGTAGAAAAGTTTTTCGCAGCCGCGGCGGCCAGCCAACCAACCAACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCA ATGCGATGGGG GGCGAC GGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATCGGGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTA ] [+] EMBL CF298683 [ AACCCAACCAGCCAACGCGGATCGCCTCTCGAGCACCAAACCCTACCCGGATCGCCAGCGCAGCCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCAGATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCGATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACT GACCAGCAACTTGTGGTCAGTGAGG ] [+] EMBL C26286 [ GCCTCTCGAGCACCAAACCCTACCCGGTTCGCNAGCGCA NCACTCACCAAGCCTTCCCCCCCACCCTGCTTCTGCTGCTCGCGCCGGGATTCTTGGCTCGTNTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGNTCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGAT ] [+] EMBL C28004 [ TCTGCTCTTCGCGGTCGGTGTCGCGCCATCAGCAACCATGGAGGGCGAGAGGAGGGCGGTGAGGACGGTGCGGGTGCGGAACATCTCANATCTGGCAGGGGAGCGGGAGGTGCGGGAGTTCTTCTCCTTCTCCGGCGAAATCGAGCACGTCGACATCAGATGCNATGGGGTGGCGACGGGGAGGACGGCCTACGTCACGTTCAAGGATCCCAAGGCCCTAGAGATCGCGCTGCTGCTGTCGGGAGCAACAATTGTGGATC GGGTTGTCAACATAACCCCTGCTGAAGACTACATCTACATCCCTGTTACTNGACCAGCAACTT ] [+] EMBL AU092795 [ gAACATCAATTGAGGNCAAATGCATCGCCCAAGATCAATCCNTTTGATAAGCGTGTTGGAAATTTCAGAGGAAGATAAACAGCGGGATAACAGTTGTAAATGAGAAAGTGAAATCTGTAGACCAAAGGCTACATGTTTCTGACAAAACAATGGCTGCTTTGCTGGCTGCAGAGCGCAAGCTAAATGACACTGGCTCTGCTGTGAAAACCAACAGGTATGTGTCTGCTGGAACAAGCTGGCTAAATGGTNCCTTCAGCAAGGTTGCTAAGGCTGGTCATGTTGCTGGCT CAAGAACAAGAGAGAAGTTCCAAATAGCTGTGTCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCACCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAA ] [+] EMBL AU100686 [ ACAAGCTGGCTAAATGGTGCCTTCAGCAAGGTTGCTAAGGCTGGTCATNTTGCTGGCTCCAAGAACAAGAGAGAAGTTCCAAATAGCTGTGNCCAATCTAACAGCGAAAGGTCCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCNCCTTCACTCAGAGTGTANCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTNCGGGGAGGTTTTTCCAGTGAGCCATGTCNGATTTNGTACATAGAGGATCTCATGTTTTTGGAACTTTAGAGNCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGNTATTCTGGGCCATATGTTGTTGANTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAA ] [-] EMBL CF276902 [ CCTGCTGTTGTTGCTTGAGCTGCTGTGGTCCTGGTTTTGGAAGCTCTTCTTCCTGGGAGAAAAGTCGATCATAAAGCATCGTGCAATCCCCTTCACTCAGAGTGTATCGACAGTGTGGCTTGTAACTGTGTATTTCACTGTTCCCATTTTTTCTTCGGGGAGGTTTTTCCAGTGAGCCATGTCAGATTTGGTACATAGAGGATTTCATGTTTTTGGAACTTTAGAGTCGCCATTCTTTTCTTTGTAGTGTCGATGTTAAATTGATTATAGGTGATAGTGATATTCTGGGCCATATGTTGTTGACTCGGTATGGATTATTGGTTATTGAATGTCTATGCTTGTGCCAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||