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Oryza sativa
cluster # 11278 cluster # 11278       Sequences # 8       consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11278#0 length = 2864 sequences # 2  
consensus_11278#1 length = 1958 sequences # 3  
 consensus_11278#2 length = 698 sequences # 2  
consensus_11278#3 length = 641 sequences # 1  
consensusID : consensus_11278#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2864
fasta sequence 
                              [TGACCACCATGGCAACCACCACCGTGCACGCCACTGACGCCATGGCCGGACGGGGCCTCTCCGCCGCCAGATGGGGATTGCTCTGCCGCCGAAGGGTCCGCAGCGAGGCCGCGCCAACTCGTGGATCGGCGGCGCAAGGCGGTGCCATAATGGCGTTTCCTTCCTCGATCCGATGCCGCTGTTGCTTCCACTGTGAGCCGCCACCATACACGCGTGCTTGTGCGGCGACCCGGCGATGCGGAGAGGGAAGAAGGCCGCCGCTTCCTCGCGGCGGCCACGGCGCGCTAGATCAAGGGAGGCAGCTCTTGCGGATTGATCACTGAAGATGGGAGAGATAGTCAGTTCTGCCATTGTTACCGAGACAGTGAACAAAATCATATCTGGCATGATTGACAATTATGAGCAAAAATTAAGTGCAGACGAGCTGATGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGCTTGCACTTGAGACATCCAGTAAGTGGCAGATCACGAGTGAGCCGTTGCTGCGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGCAAGTGCAGGCAGCATGTCCAGGAAGAAGAGGAGAAGGAACAGCAAGTAAGGAATTCCTCCTTTCCTAGGCGAATTGCCTGTGCCACCAAATCACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCAAGTAGATCAACTGTTCAAAGATTTGAGTGGTTTGCTAAGGGAGCTGATGACTTTCTGAAATCTCTGGAGTTTGGAGGGACACCTCGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTCTTGCTGGTGAAACACTTGAGTACAAATTTGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAATGACATTGCAGATCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAACGATTGCAGTGCACCTGAGAATAACTTTTTCCTCGGTATGATGCTACAAATTTCAGAGAGTACAAACATAATTGGCACTATAATTAAGTGCTTGCAATGGTTTACCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTGCTCAGCTCCCTACACAAGACTTCTCCTGGGTGTCACATTATCGTTCATACCATTGGGACAACATTCATGGTATAGCTACTAAGTGGTTCCGCCCAAACCCAATATGCTGCAAACATCAAGATCAGAGCATGTGTGGGAGTGGCAGCATGGACAAGGCAGAACTGCTAGATGTTTCTCTTCAACCAATCATTGAAGTGTATTTGGAGCGTCAAATCACACAATTTAGATGCAACAGTCAGAGGGCAGCTATACAAGGAAAAAACAATAAACAGAGAGCAGCTGTACGAGGAAAAAGATGTTATCCAAGAAGGCCTTCACATCTGAAACTTGGGGTTCTTTTTTTGCCTCATAGCTCTTCAAATGACCTTCTGCCTGCAGCTGAGAGTTCTGCAGTAGAGGTGATCAATGGCGAGGAGCAGCCTTGGTATCACAGAAACATTACCCTGGAACAGCTAGACAAGGTCATGCTGCCAAAGGCAATAGGTAGCATCAATCAGAATTCTGAAGCAACAGCACACCAGCTTCTCTGGAAGTCAAAACATGAAGCTGCATTCTTTCATTTGGGGAAGACGAGAATGAATATGCCGAGCACATTGAGCACTGCTAGGGAAGCAACTGTGTCGAGACGACAGGAACTTGATCTGGAGAGCCGGGCAGATGTGATCTCTGAGTTCCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGATGCAGCGCTCAATTGTAGACTGGATTCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACCATTCTAGAATTCTAGATCATGTAAGAGAGATCGATGAGGGTAACAAGGGGAATGGATAGGAAGTTCTTCATGATGAGAAATGAGCCTTGTTCAGTCTTAATTTCTAAGCCAGCAATAACTTGGTATGTACAATAGGGTTTCATGAAAGTGAAGCACAGTCTGTTCAGCTCAGCATATAAGCAAGCTGGTAATAACATGGTGTTGAAATATTACGCAAGAAATCCGTTCACTGGATGGGTAATCGTTCTTTTTATCTGAATTTTTCTTGTCTAATCTTTTGCCATCATTGAAAGTGTGATGATGATATTGATATATAGTTTATGTCTCTAGTCTCAACCTGTTGGCTGTTACTATTTCGTACTCAACCTGTTGCCCGGCATTTCAGATTTCCATGCACAGTCAATGGCATGAAAATTCTGAAAACAAGTCCAACGTTTTACTGGTCTAGCTAGTTTCTTCTATCACTGATATTTCACGGCCCTTCTAGAAGAAAAAAAAAATTCTAAACCGAGGTACGACTTGATCAAGAGTTCATTAAGATAATAAAAGACTTGATTAGTCCCTCTCCCATCATGATGATTCCCTGGAAAATGAAACAAATTATAACTAGCACTTTCCAGTAATGTTGCTTGTGCAGGAGAAGGAAGGTTGCCGTTCTTTTTCTCGTGCTCCATGCAGACCGAGGAAGGAAACGTCATGCCCAGGCGATCTCGCCGGCGCAGCTTATCGATCCCAGATTATTCTGCGGCAGCGACCACGTCGGCGGCTCCGCCATGGATGATCGGCGAGGAAACGTGCCGACGAATGGGTCGTGTATTTTCTTAAAAAAAGAAAAAACCGAACCAAGGGGTTCGGAGATTAAAACTCCGACTCCTCTAACCCTCACCTTTTTTTTTCGAGTGGAACGATGATTTATCGCTTCATTTTTCTCTCTCCCTGCAGAGAACCGAATGTAACTAATCGATTAGAGAGCAATCCTGCATGCAATCGACCAAAACCCAATT]

[+] EMBL AK103212             [TGACCACCATGGCAACCACCACCGTGCACGCCACTGACGCCATGGCCGGACGGGGCCTCTCCGCCGCCAGATGGGGATTGCTCTGCCGCCGAAGGGTCCGCAGCGAGGCCGCGCCAACTCGTGGATCGGCGGCGCAAGGCGGTGCCATAATGGCGTTTCCTTCCTCGATCCGATGCCGCTGTTGCTTCCACTGTGAGCCGCCACCATACACGCGTGCTTGTGCGGCGACCCGGCGATGCGGAGAGGGAAGAAGGCCGCCGCTTCCTCGCGGCGGCCACGGCGCGCTAGATCAAGGGAGGCAGCTCTTGCGGATTGATCACTGAAGATGGGAGAGATAGTCAGTTCTGCCATTGTTACCGAGACAGTGAACAAAATCATATCTGGCATGATTGACAATTATGAGCAAAAATTAAGTGCAGACGAGCTGATGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGCTTGCACTTGAGACATCCAGTAAGTGGCAGATCACGAGTGAGCCGTTGCTGCGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGCAAGTGCAGGCAGCATGTCCAGGAAGAAGAGGAGAAGGAACAGCAAGTAAGGAATTCCTCCTTTCCTAGGCGAATTGCCTGTGCCACCAAATCACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCAAGTAGATCAACTGTTCAAAGATTTGAGTGGTTTGCTAAGGGAGCTGATGACTTTCTGAAATCTCTGGAGTTTGGAGGGACACCTCGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTCTTGCTGGTGAAACACTTGAGTACAAATTTGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAATGACATTGCAGATCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAACGATTGCAGTGCACCTGAGAATAACTTTTTCCTCGGTATGATGCTACAAATTTCAGAGAGTACAAACATAATTGGCACTATAATTAAGTGCTTGCAATGGTTTACCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTGCTCAGCTCCCTACACAAGACTTCTCCTGGGTGTCACATTATCGTTCATACCATTGGGACAACATTCATGGTATAGCTACTAAGTGGTTCCGCCCAAACCCAATATGCTGCAAACATCAAGATCAGAGCATGTGTGGGAGTGGCAGCATGGACAAGGCAGAACTGCTAGATGTTTCTCTTCAACCAATCATTGAAGTGTATTTGGAGCGTCAAATCACACAATTTAGATGCAACAGTCAGAGGGCAGCTATACAAGGAAAAAACAATAAACAGAGAGCAGCTGTACGAGGAAAAAGATGTTATCCAAGAAGGCCTTCACATCTGAAACTTGGGGTTCTTTTTTTGCCTCATAGCTCTTCAAATGACCTTCTGCCTGCAGCTGAGAGTTCTGCAGTAGAGGTGATCAATGGCGAGGAGCAGCCTTGGTATCACAGAAACATTACCCTGGAACAGCTAGACAAGGTCATGCTGCCAAAGGCAATAGGTAGCATCAATCAGAATTCTGAAGCAACAGCACACCAGCTTCTCTGGAAGTCAAAACATGAAGCTGCATTCTTTCATTTGGGGAAGACGAGAATGAATATGCCGAGCACATTGAGCACTGCTAGGGAAGCAACTGTGTCGAGACGACAGGAACTTGATCTGGAGAGCCGGGCAGATGTGATCTCTGAGTTCCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGATGCAGCGCTCAATTGTAGACTGGATTCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACCATTCTAGAATTCTAGATCATGTAAGAGAGATCGATGAGGGTAACAAGGGGAATGGATAGGAAGTTCTTCATGATGAGAAATGAGCCTTGTTCAGTCTTAATTTCTAAGCCAGCAATAACTTGGTATGTACAATAGGGTTTCATGAAAGTGAAGCACAGTCTGTTCAGCTCAGCATATAAGCAAGCTGGTAATAACATGGTGTTGAAATATTACGCAAGAAATCCGTTCACTGGATGGGTAATCGTTCTTTTTATCTGAATTTTTCTTGTCTAATCTTTTGCCATCATTGAAAGTGTGATGATGATATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AK119295             [                                         ATGGCCGGACGGGGCCTCTCCGCCGCCAGATGGGGATTGCTCTGCCGCCGAAGGGTCCGCAGCGAGGCCGCGCCCACTCGTGGATCGGCGGCGCAAGGCGGTGCCATAATGGCGTTTCCTTCCTCGATCCGATGCCGCTGTTGCTTCCACTGTGAGCCGCCACCATACACGCGTGCTTGTGCGGCGACCCGGCGATGCGGAGAGGGAAGAAGGCCGCCGCTTCCTCGCGGCGGCCACGGCGCGCTAGATCAAGGGAGGCAGCTCTTGCGGATTGATCACTGAAGATGGGAGAGATAGTCAGTTCTGCCATTGTTACCGAGACAGTGAACAAAATCATATCTGGCATGATTGACAATTATGAGCAAAAATTAAGTGCAGACGAGCTGATGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGCTTGCACTTGAGACATCCAGTAAGTGGCAGATCACGAGTGAGCCGTTGCTGCGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGCAAGTGCAGGCAGCATGTCCAGGAAGAAGAGGAGAAGGAACAGCAAGTAAGGAATTCCTCCTTTCCTAGGCGAATTGCCTGTGCCACCAAATCACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCAAGTAGATCAACTGTTCAAAGATTTGAGTGGTTTGCTAAGGGAGCTGATGACTTTCTGAAATCTCTGGAGTTTGGAGGGACACCTCGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTCTTGCTGGTGAAACACTTGAGTACAAATTTGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAATGACATTGCAGATCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAACGATTGCAGTGCACCTGAGAATAACTTTTTCCTCGGTATGATGCTACAAATTTCAGAGAGTACAAACATAATTGGCACTATAATTAAGTGCTTGCAATGGTTTACCCCTCATTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTGCTCAGCTCCCTACACAAGACTTCTCCTGGGTGTCACATTATCGTTCATACCATTGGGACAACATTCATGGTATAGCTACTAAGTGGTTCCGCCCAAACCCAATATGCTGCAAACATCAAGATCAGAGCATGTGTGGGAGTGGCAGCATGGACAAGGCAGAACTGCTAGATGTTTCTCTTCAACCAATCATTGAAGTGTATTTGGAGCGTCAAATCACACAATTTAGATGCAACAGTCAGAGGGCAGCTATACAAGGAAAAAACAATAAACAGAGAGCAGCTGTACGAGGAAAAAGATGTTATCCAAGAAGGCCTTCACATCTGAAACTTGGGGTTCTTTTTTTGCCTCATAGCTCTTCAAATGACCTTCTGCCTGCAGCTGAGAGTTCTGCAGTAGAGGTGATCAATGGCGAGGAGCAGCCTTGGTATCACAGAAACATTACCCTGGAACAGCTAGACAAGGTCATGCTGCCAAAGGCAATAGGTAGCATCAATCAGAATTCTGAAGCAACAGCACACCAGCTTCTCTGGAAGTCAAAACATGAAGCTGCATTCTTTCATTTGGGGAAGACGAGAATGAATATGCCGAGCACATTGAGCACTGCTAGGGAAGCAACTGTGTCGAGACGACAGGAACTTGATCTGGAGAGCCGGGCAGATGTGATCTCTGAGTTCCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGATGCAGCGCTCAATTGTAGACTGGATTCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACCATTCTAGAATTCTAGATCATGTAAGAGAGATCGATGAGGGTAACAAGGGGAATGGATAGGAAGTTCTTCATGATGAGAAATGAGCCTTGTTCAGTCTTAATTTCTAAGCCAGCAATAACTTGGTATGTACAATAGGGTTTCATGAAAGTGAAGCACAGTCTGTTCAGCTCAGCATATAAGCAAGCTGGTAATAACATGGTGTTGAAATATTACGCAAGAAATCCGTTCACTGGATGGGTAATCGTTCTTTTTATCTGAATTTTTCTTGTCTAATCTTTTGCCATCATTGAAAGTGTGATGATGATATTGATATATAGTTTATGTCTCTAGTCTCAACCTGTTGGCTGTTACTATTTCGTACTCAACCTGTTGCCCGGCATTTCAGATTTCCATGCACAGTCAATGGCATGAAAATTCTGAAAACAAGTCCAACGTTTTACTGGTCTAGCTAGTTTCTTCTATCACTGATATTTCACGGCCCTTCTAGAAGAAAAAAAAAATTCTAAACCGAGGTACGACTTGATCAAGAGTTCATTAAGATAATAAAAGACTTGATTAGTCCCTCTCCCATCATGATGATTCCCTGGAAAATGAAACAAATTATAACTAGCACTTTCCAGTAATGTTGCTTGTGCAGGAGAAGGAAGGTTGCCGTTCTTTTTCTCGTGCTCCATGCAGACCGAGGAAGGAAACGTCATGCCCAGGCGATCTCGCCGGCGCAGCTTATCGATCCCAGATTATTCTGCGGCAGCGACCACGTCGGCGGCTCCGCCATGGATGATCGGCGAGGAAACGTGCCGACGAATGGGTCGTGTATTTTCTTAAAAAAAGAAAAAACCGAACCAAGGGGTTCGGAGATTAAAACTCCGACTCCTCTAACCCTCACCTTTTTTTTTCGAGTGGAACGATGATTTATCGCTTCATTTTTCTCTCTCCCTGCAGAGAACCGAATGTAACTAATCGATTAGAGAGCAATCCTGCATGCAATCGACCAAAACCCAATT]




>consensus_11278#0
TGACCACCATGGCAACCACCACCGTGCACGCCACTGACGCCATGGCCGGACGGGGCCTCT
CCGCCGCCAGATGGGGATTGCTCTGCCGCCGAAGGGTCCGCAGCGAGGCCGCGCCAACTC
GTGGATCGGCGGCGCAAGGCGGTGCCATAATGGCGTTTCCTTCCTCGATCCGATGCCGCT
GTTGCTTCCACTGTGAGCCGCCACCATACACGCGTGCTTGTGCGGCGACCCGGCGATGCG
GAGAGGGAAGAAGGCCGCCGCTTCCTCGCGGCGGCCACGGCGCGCTAGATCAAGGGAGGC
AGCTCTTGCGGATTGATCACTGAAGATGGGAGAGATAGTCAGTTCTGCCATTGTTACCGA
GACAGTGAACAAAATCATATCTGGCATGATTGACAATTATGAGCAAAAATTAAGTGCAGA
CGAGCTGATGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGCTTGCACTTGAGACATC
CAGTAAGTGGCAGATCACGAGTGAGCCGTTGCTGCGTTGGCAGAAGAAGCTGAAGCGTGC
TACTGAAGAGTGTGATGACACACTACGCAAGTGCAGGCAGCATGTCCAGGAAGAAGAGGA
GAAGGAACAGCAAGTAAGGAATTCCTCCTTTCCTAGGCGAATTGCCTGTGCCACCAAATC
ACTGATATCATCCATCTTTCACGGCAATATCGACGAGCCAAGTAGATCAACTGTTCAAAG
ATTTGAGTGGTTTGCTAAGGGAGCTGATGACTTTCTGAAATCTCTGGAGTTTGGAGGGAC
ACCTCGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTCTTGCTGGTGAAACACT
TGAGTACAAATTTGTGCAGGGAAACAAGCAGCATTTGTTTTGGATACGGCCCAATGACAT
TGCAGATCGAGGAGTAGAAGCTAAGTTGATCTTTGTTTACAACGATTGCAGTGCACCTGA
GAATAACTTTTTCCTCGGTATGATGCTACAAATTTCAGAGAGTACAAACATAATTGGCAC
TATAATTAAGTGCTTGCAATGGTTTACCCCTCATTTCAAGTCTACAACTGAAACTGTTAG
GAAGGAACTTGCTCAGCTCCCTACACAAGACTTCTCCTGGGTGTCACATTATCGTTCATA
CCATTGGGACAACATTCATGGTATAGCTACTAAGTGGTTCCGCCCAAACCCAATATGCTG
CAAACATCAAGATCAGAGCATGTGTGGGAGTGGCAGCATGGACAAGGCAGAACTGCTAGA
TGTTTCTCTTCAACCAATCATTGAAGTGTATTTGGAGCGTCAAATCACACAATTTAGATG
CAACAGTCAGAGGGCAGCTATACAAGGAAAAAACAATAAACAGAGAGCAGCTGTACGAGG
AAAAAGATGTTATCCAAGAAGGCCTTCACATCTGAAACTTGGGGTTCTTTTTTTGCCTCA
TAGCTCTTCAAATGACCTTCTGCCTGCAGCTGAGAGTTCTGCAGTAGAGGTGATCAATGG
CGAGGAGCAGCCTTGGTATCACAGAAACATTACCCTGGAACAGCTAGACAAGGTCATGCT
GCCAAAGGCAATAGGTAGCATCAATCAGAATTCTGAAGCAACAGCACACCAGCTTCTCTG
GAAGTCAAAACATGAAGCTGCATTCTTTCATTTGGGGAAGACGAGAATGAATATGCCGAG
CACATTGAGCACTGCTAGGGAAGCAACTGTGTCGAGACGACAGGAACTTGATCTGGAGAG
CCGGGCAGATGTGATCTCTGAGTTCCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGAT
GCAGCGCTCAATTGTAGACTGGATTCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACC
ATTCTAGAATTCTAGATCATGTAAGAGAGATCGATGAGGGTAACAAGGGGAATGGATAGG
AAGTTCTTCATGATGAGAAATGAGCCTTGTTCAGTCTTAATTTCTAAGCCAGCAATAACT
TGGTATGTACAATAGGGTTTCATGAAAGTGAAGCACAGTCTGTTCAGCTCAGCATATAAG
CAAGCTGGTAATAACATGGTGTTGAAATATTACGCAAGAAATCCGTTCACTGGATGGGTA
ATCGTTCTTTTTATCTGAATTTTTCTTGTCTAATCTTTTGCCATCATTGAAAGTGTGATG
ATGATATTGATATATAGTTTATGTCTCTAGTCTCAACCTGTTGGCTGTTACTATTTCGTA
CTCAACCTGTTGCCCGGCATTTCAGATTTCCATGCACAGTCAATGGCATGAAAATTCTGA
AAACAAGTCCAACGTTTTACTGGTCTAGCTAGTTTCTTCTATCACTGATATTTCACGGCC
CTTCTAGAAGAAAAAAAAAATTCTAAACCGAGGTACGACTTGATCAAGAGTTCATTAAGA
TAATAAAAGACTTGATTAGTCCCTCTCCCATCATGATGATTCCCTGGAAAATGAAACAAA
TTATAACTAGCACTTTCCAGTAATGTTGCTTGTGCAGGAGAAGGAAGGTTGCCGTTCTTT
TTCTCGTGCTCCATGCAGACCGAGGAAGGAAACGTCATGCCCAGGCGATCTCGCCGGCGC
AGCTTATCGATCCCAGATTATTCTGCGGCAGCGACCACGTCGGCGGCTCCGCCATGGATG
ATCGGCGAGGAAACGTGCCGACGAATGGGTCGTGTATTTTCTTAAAAAAAGAAAAAACCG
AACCAAGGGGTTCGGAGATTAAAACTCCGACTCCTCTAACCCTCACCTTTTTTTTTCGAG
TGGAACGATGATTTATCGCTTCATTTTTCTCTCTCCCTGCAGAGAACCGAATGTAACTAA
TCGATTAGAGAGCAATCCTGCATGCAATCGACCAAAACCCAATT

consensusID : consensus_11278#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1958
fasta sequence 
                              [CTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGTATGTGAATCTCAATCTGAAGGTAGAGAGAGTGAGGAAGCAGAGCTGGAAGAAGAACACTAGGTCCTAAGTGTAACATTTTGTAAAAATTACTAGCCCAAAGTGAAAATAATAGCTTGTTCCTAGTCCAAGCTGCGACCATGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAACAAGCAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAA-GCTAAGTTGTTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATTCTACAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGTTGTTTACTCCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACACAAGACTTCTCCAGGGTGTCACATTCTCACTCATAC-GGTTGGGAGAACATTCATAGTATAGCTACT-GAATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAGTATGTGGTAGTGGGAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCATTGAAGTGAGTTTACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTGTTGAGGGTAAATCTTCACTTAAAGAATTTCCGCATCTGAATGTTATCCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTTGATAGTACTGTGATTGAGGTGATTAATGGTAACGAGCAACATTGCTTGCACACAAATGTTCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATTTCTTCAGGCTGTGAAGGCAACAATGAACATGCGGAGCACACGGAGAACCATTCGAGGAGCCAGGAAAGCAAAGATGTTGCGACGACATGATCGCCGGACACACAATCACAGACATGAGGTCGCTGACTTCCTCAGCCTTTGGGCTGTGCATGCACCTGTCCGGCTTCAGGGCTCACTCCTTGACTGGATTCGGAAGGAGAAGAAAGTAGCAGGTCCTCTACTGACATTTTAGATGATGTAATAGGGACTAGAAGGGAAACAGGGATAATTAAAATTAAAAGAATGGGGGAGAAAAGTAACATGTAGGGAGTTGGTTTCTAAGTACTTAGGAGTGTATTCATCTGAAATGTTCTACATATACTGCTGTTGTTTGTCTCGTCAGTTATGTTGGCAAATGGTGATAACATGATGTTCTTGCCCTAGAAGTCTAATGTACCAGCCTTGCTCATTCGATGTGTCTG]

[+] EMBL AK102508             [CTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGTATGTGAATCTCAATCTGAAGGTAGAGAGAGTGAGGAAGCAGAGCTGGAAGAAGAACACTAGGTCCTAAGTGTAACATTTTGTAAAAATTACTAGCCCAAAGTGAAAATAATAGCTTGTTCCTAGTCCAAGCTGCGACCATGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAACAAGCAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAA GCTAAGTTGTTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATTCTACAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGTTGTTTACTCCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACACAAGACTTCTCCAGGGTGTCACATTCTCACTCATAC GGTTGGGAGAACATTCATAGTATAGCTACT GAATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAGTATGTGGTAGTGGGAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCATTGAAGTGAGTTTACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTGTTGAGGGTAAATCTTCACTTAAAGAATTTCCGCATCTGAATGTTATCCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTTGATAGTACTGTGATTGAGGTGATTAATGGTAACGAGCAACATTGCTTGCACACAAATGTTCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGCAAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATTTCTTCAGGCTGTGAAGGCAACAATGAACATGCGGAGCACACGGAGAACCATTCGAGGAGCCAGGAAAGCAAAGATGTTGCGACGACATGATCGCCGGACACACAATCACAGACATGAGGTCGCTGACTTCCTCAGCCTTTGGGCTGTGCATGCACCTGTCCGGCTTCAGGGCTCACTCCTTGACTGGATTCGGAAGGAGAAGAAAGTAGCAGGTCCTCTACTGACATTTTAGATGATGTAATAGGGACTAGAAGGGAAACAGGGATAATTAAAATTAAAAGAATGGGGGAGAAAAGTAACATGTAGGGAGTTGGTTTCTAAGTACTTAGGAGTGTATTCATCTGAAATGTTCTACATATACTGCTGTTGTTTGTCTCGTCAGTTATGTTGGCAAATGGTGATAACATGATGTTCTTGCCCTAGAAGTCTAATGTACCAGCCTTGCTCATTCGATGTGTCTG]
[+] EMBL AU089679             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF312020             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATGCCACCAAGACACTGGTATCTTCC TCTTT ACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACT  TTCTTTGACCCTCTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAACAAGCAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAANGCTAAGTTGTTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATTCTACAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAG GCTTGCAGTTGTTTACTCCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACACAAGACTTCTCCAGGGTGTCACATTCTCACTCATACGGGTTGGGAGAACATTCATAGTATAGCTACTGGAATGGTTCCGCCCAAATCCACTGTGTTGCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]




>consensus_11278#1
CTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTCTATCTCTA
CTAAAACCAACTAGCCAGGTATGTGAATCTCAATCTGAAGGTAGAGAGAGTGAGGAAGCA
GAGCTGGAAGAAGAACACTAGGTCCTAAGTGTAACATTTTGTAAAAATTACTAGCCCAAA
GTGAAAATAATAGCTTGTTCCTAGTCCAAGCTGCGACCATGGGAAGGATTACTGAAGATG
GAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTG
ATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCA
CAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCG
TTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGG
AAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCC
TTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAAT
AGTGATGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAAT
GATTTTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCT
CTTATCGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAACAAG
CAGCATTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAAGCTAAGTTG
TTCTTTGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATTCTA
CAACTTTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGTTGTTTACT
CCTTATTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACACAA
GACTTCTCCAGGGTGTCACATTCTCACTCATACGGTTGGGAGAACATTCATAGTATAGCT
ACTGAATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAGTATGTGGT
AGTGGGAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCATTGAAGTG
AGTTTACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTGTTGAGGGT
AAATCTTCACTTAAAGAATTTCCGCATCTGAATGTTATCCTTGTCTATACGCCCCATGGC
TCTTCAGAAGACCTATTCCCAGCAGTTGATAGTACTGTGATTGAGGTGATTAATGGTAAC
GAGCAACATTGCTTGCACACAAATGTTCATGCTGCCAAGGGCTGTAGATTGTTTTCGTCA
GAATGCAAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATTTCT
TCAGGCTGTGAAGGCAACAATGAACATGCGGAGCACACGGAGAACCATTCGAGGAGCCAG
GAAAGCAAAGATGTTGCGACGACATGATCGCCGGACACACAATCACAGACATGAGGTCGC
TGACTTCCTCAGCCTTTGGGCTGTGCATGCACCTGTCCGGCTTCAGGGCTCACTCCTTGA
CTGGATTCGGAAGGAGAAGAAAGTAGCAGGTCCTCTACTGACATTTTAGATGATGTAATA
GGGACTAGAAGGGAAACAGGGATAATTAAAATTAAAAGAATGGGGGAGAAAAGTAACATG
TAGGGAGTTGGTTTCTAAGTACTTAGGAGTGTATTCATCTGAAATGTTCTACATATACTG
CTGTTGTTTGTCTCGTCAGTTATGTTGGCAAATGGTGATAACATGATGTTCTTGCCCTAG
AAGTCTAATGTACCAGCCTTGCTCATTCGATGTGTCTG

consensusID : consensus_11278#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 698
fasta sequence 
                              [TCGTCTGCTGGCAGCTGCCAGCTGGGTACTCTCTGGTGCATCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTTCTTCCTACTAATTCAACTCAGAAGGTTGGGTTTGCATATACTTCAAA-GGGAAGGATTACTGAAGATGGAAGAGATAGTCGG-TTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTNTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTC]

[+] EMBL CF306583             [TCGTCTGCTGGCAGCTGCCAGCTGGGTACTCTCTGGTGCATCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTTCTTCCTACTAATTCAACTCAGAAGGTTGGGTTTGCATATACTTCAAA GGGAAGGATTACTGAAGATGGAAGAGATAGTCGG TTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTGCAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTTCTGTCCAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTNTCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTC]
[+] EMBL CF304816             [                                                   TCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTTCTTCCTACTAATTCAACTCAGAAGGTTGGGTTTGCATATACTTCAAAGGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTTCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]




>consensus_11278#2
TCGTCTGCTGGCAGCTGCCAGCTGGGTACTCTCTGGTGCATCTGTGTTCCCTCAAGTTCC
TTCCTACTAATTCAACTCAGAAGGCACCTGTGTTCCCTCAAGTTCCTTCCTACTAATTCA
ACTCAGAAGGCACCTGTGTTCCCTCAAGTTTCTTCCTACTAATTCAACTCAGAAGGTTGG
GTTTGCATATACTTCAAAGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTCTGCTA
TCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAAT
CAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTCGCAC
TTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGC
TGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTGCAGGCAACATATCCAGG
AAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCCTAGGCGAATTGCCCATG
CCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGATGAGCTGGGTAGATCTT
CTGTCCAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTNTCTAAGATCTGTGGAATT
TGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTC

consensusID : consensus_11278#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 641
fasta sequence 
                              [AGGTTCCATCTACGTGTTTGACCTACGTCAGCGCCTGAGCTTGAGTGTGTGGTAGTCTCCGTCTTGAGCTCAACACGGCACACGGCAGAGCTCCAGCTTGAGCTCAATTAGCACATAGCCAATGAATCACGGTGGCACGGTGGGAAATTCTAACACCATATGTTATCACTCCACACTTATGCTCCACCAACTAGTCAATAGGTCCCATTCTAGCCCAAGTTCATCCATGGCAGTACTAGCTTAATTGGAGCTAGGGCACTTAATCAAGGCTGCACATTAAATCTTGAGCACGAATGAATGTGGCAGGGGCAGCGAAGGCTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTTGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTG]

[+] EMBL CF307162             [AGGTTCCATCTACGTGTTTGACCTACGTCAGCGCCTGAGCTTGAGTGTGTGGTAGTCTCCGTCTTGAGCTCAACACGGCACACGGCAGAGCTCCAGCTTGAGCTCAATTAGCACATAGCCAATGAATCACGGTGGCACGGTGGGAAATTCTAACACCATATGTTATCACTCCACACTTATGCTCCACCAACTAGTCAATAGGTCCCATTCTAGCCCAAGTTCATCCATGGCAGTACTAGCTTAATTGGAGCTAGGGCACTTAATCAAGGCTGCACATTAAATCTTGAGCACGAATGAATGTGGCAGGGGCAGCGAAGGCTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGAGCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGGAAGGATTACTGAAGATGGAAGAGATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGACCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAATCAAGTTGGAGTTTGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTTACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTG]




>consensus_11278#3
AGGTTCCATCTACGTGTTTGACCTACGTCAGCGCCTGAGCTTGAGTGTGTGGTAGTCTCC
GTCTTGAGCTCAACACGGCACACGGCAGAGCTCCAGCTTGAGCTCAATTAGCACATAGCC
AATGAATCACGGTGGCACGGTGGGAAATTCTAACACCATATGTTATCACTCCACACTTAT
GCTCCACCAACTAGTCAATAGGTCCCATTCTAGCCCAAGTTCATCCATGGCAGTACTAGC
TTAATTGGAGCTAGGGCACTTAATCAAGGCTGCACATTAAATCTTGAGCACGAATGAATG
TGGCAGGGGCAGCGAAGGCTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGA
GCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGGAAGGATTACTGAAGATGGAAGA
GATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGA
CCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAAT
CAAGTTGGAGTTTGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTT
ACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      ------------------------------------------------------------
consensus_11278#3      AGGTTCCATCTACGTGTTTGACCTACGTCAGCGCCTGAGCTTGAGTGTGTGGTAGTCTCC 60
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      -------------TGACCACCATGGCAACCACCACCGTGCACGCCACTGACGCCATGGCC 47
consensus_11278#3      GTCTTGAGCTCAACACGGCACACGGCAGAGCTCCAGCTTGAGCTCAATTAGCACATAGCC 120
                                                                                   

consensus_11278#1      ---------------CTGACTGGCTGAGTAGAGCTCGAGCATGACTG------TACTGGT 39
consensus_11278#2      ------------TCGTCTGCTGGCAGCTGCCAGCTGGGTACTCTCTGG---TGCATCTGT 45
consensus_11278#0      GGACGGGGCCTCTCCGCCGCCAGATGGGGATTGCTCTGCCGCCGAAGGGTCCGCAGCGAG 107
consensus_11278#3      AATGAATCACGGTGGCACGGTGGGAAATTCTAACACCATATGTTATCACTCCACACTTAT 180
                                             *          *                    *     

consensus_11278#1      GGAGCTTGAGCTCTATCTCTACTAAAA-------CCAACTAGCCAGGTATGTGAATC--T 90
consensus_11278#2      GTTCCCTCAAGTTCCTTCCTACTAAT--------TCAACTCAGAAGGCACCTGTGTT--C 95
consensus_11278#0      GCCGCGCCAACTCGTGGATCGGCGGCG-------CAAGGCGGTGCCATAATGGCGTT--T 158
consensus_11278#3      GCTCCACCAACTAGTCAATAGGTCCCATTCTAGCCCAAGTTCATCCATGGCAGTACTAGC 240
                       *   *   *  *                        *               *       

consensus_11278#1      CAATCTGAAGGTAGAGAGAGTGAGGAAGCAGAGCTGGAAGAA-----GAACACTAGGTCC 145
consensus_11278#2      C---CTCAAGTTCCTTC---CTACTAATTCAACTCAGAAG-------GCACCTGTGTTCC 142
consensus_11278#0      CCTTCCTCGATCCGATGCCGCTGTTGCTTCCACTGTGAGCCGCCACCATACACGCGTGCT 218
consensus_11278#3      TTAATTGGAGCTAGGGCACTTAATCAAGGCTGCACATTAAATCTTGAGCACGAATGAATG 300
                                                                        **    *    

consensus_11278#1      TAAGTG------TAACATTTTGTAAAAA--------TT-----ACTAGCCCAAAGTGAAA 186
consensus_11278#2      C-----------TCAAGTTTCTTC------------CT-----ACTAATTCAACTCAGAA 174
consensus_11278#0      TGTGCGGCGACCCGGCGATGCGGAGAGGGAAGAAGGCC-----GCCGCTTCCTCGCGGCG 273
consensus_11278#3      TGGCAGGGGCAGCGAAGGCTGACTGGCTGAGTAGAGCTCGAGCATGACTGTACTGGTGGA 360
                                                                                   

consensus_11278#1      ATAATAGCTTGT-TCCTAGTCCAAGCTGCGACCATGGGAAGGATTACTGAAGATGGAAGA 245
consensus_11278#2      GGTTGGGTTTGC-ATATACTTCAAA----------GGGAAGGATTACTGAAGATGGAAGA 223
consensus_11278#0      GCCACGGCGCGCTAGATCAAGGGAGGCAGCTCTTGCGGATTGATCACTGAAGATGGGAGA 333
consensus_11278#3      GCTTGAGCTCTATCTCTACTAAAACCAACTAGCCAGGGAAGGATTACTGAAGATGGAAGA 420
                             *         *      *            ***  *** *********** ***

consensus_11278#1      GATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGA 305
consensus_11278#2      GATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGA 283
consensus_11278#0      GATAGTCAGTTCTGCCATTGTTACCGAGACAGTGAACAAAATCATATCTGGCATGATTGA 393
consensus_11278#3      GATAGTCGGTTCTGCTATCGTTCAAGAGACGGTAAACAGGATCATATCTGGGTTGATTGA 480
                       ******* ******* ** ***   ***** ** ****  ***********  *******

consensus_11278#1      CCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAAT 365
consensus_11278#2      CCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAAT 343
consensus_11278#0      CAATTATGAGCAAAAATTAAGTGCAGACGAGCTGATGGAGAGGCTGGAGATGGCACAAAT 453
consensus_11278#3      CCGGTGTGAGCGAAAATCAAGTGCACGGGATCACCTGGAGAGGCTGGAGATGGCACAAAT 540
                       *   * ***** ***** *******   ** *   *************************

consensus_11278#1      CAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTT 425
consensus_11278#2      CAAGTTGGAGTTCGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTT 403
consensus_11278#0      CAAGTTGGAGCTTGCACTTGAGACATCCAGTAAGTGGCAGATCACGAGTGAGCCGTTGCT 513
consensus_11278#3      CAAGTTGGAGTTTGCACTTGAGACATCCAATAAATGGCAGATCACTAGTGGCCCGTTGTT 600
                       ********** * **************** *** *********** ****  ****** *

consensus_11278#1      ACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTG 485
consensus_11278#2      ACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGGAAGTG 463
consensus_11278#0      GCGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTGATGACACACTACGCAAGTG 573
consensus_11278#3      ACGTTGGCAGAAGAAGCTGAAGCGTGCTACTGAAGAGTGTG------------------- 641
                        ****************************************                   

consensus_11278#1      CAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCC 545
consensus_11278#2      CAGGCAACATATCCAGGAAGAAGATGAGGTGGAACAACAAGTAAGGAATTCTTCCTTTCC 523
consensus_11278#0      CAGGCAGCATGTCCAGGAAGAAGAGGAGAAGGAACAGCAAGTAAGGAATTCCTCCTTTCC 633
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGA 605
consensus_11278#2      TAGGCGAATTGCCCATGCCACCAAGACACTGGTATCTTCCATCTTTCACAGCAATAGTGA 583
consensus_11278#0      TAGGCGAATTGCCTGTGCCACCAAATCACTGATATCATCCATCTTTCACGGCAATATCGA 693
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TGAGCTGGGTAGATCTTCTGTCCAAAGATTCGAGTGGTTTGCAGATGGAGCTAATGATTT 665
consensus_11278#2      TGAGCTGGGTAGATCTTCTGTCCAA-GATTCGAGTGGTTTGCAGATGGAGCTAATGATTN 642
consensus_11278#0      CGAGCCAAGTAGATCAACTGTTCAAAGATTTGAGTGGTTTGCTAAGGGAGCTGATGACTT 753
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTCTTAT 725
consensus_11278#2      TCTAAGATCTGTGGAATTTGGAGGCACACCACGCCGTTACTTGTTCTTTGACCCTC---- 698
consensus_11278#0      TCTGAAATCTCTGGAGTTTGGAGGGACACCTCGCCGTTACTTGTTCTTTGACCCTCTTAT 813
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      CGGGCACCTTATTTCAGGTGAAACGTTAGAGTACAAATCAATACAGGGAAACAAGCAGCA 785
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CGGGCACCTTCTTGCTGGTGAAACACTTGAGTACAAATTTGTGCAGGGAAACAAGCAGCA 873
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TTGGTTTTGGGTACGGCCCAATAACTCTGCAGAGCGAGGAATAGAAGCTAAGTTGTTCTT 845
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TTTGTTTTGGATACGGCCCAATGACATTGCAGATCGAGGAGTAGAAGCTAAGTTGATCTT 933
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TGCTTTCAATGATGGCAGTGCACCTGAGGACAACTTTTACATTGATATTATTCTACAACT 905
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TGTTTACAACGATTGCAGTGCACCTGAGAATAACTTTTTCCTCGGTATGATGCTACAAAT 993
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TTCAGAGAGTACAAACATAGTTGGTACTACAATTAAGTGCTTGCAGTTGTTTACTCCTTA 965
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TTCAGAGAGTACAAACATAATTGGCACTATAATTAAGTGCTTGCAATGGTTTACCCCTCA 1053
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TTTTGAGTCTACAGCTGAAACTGTTAGGAAAGAACTTATTCAACTACCTACACAAGACTT 1025
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TTTCAAGTCTACAACTGAAACTGTTAGGAAGGAACTTGCTCAGCTCCCTACACAAGACTT 1113
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      CTCCAGGGTGTCACATTCTCACTCATACGGTTGGGAGAACATTCATAGTATAGCTACTGA 1085
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTCCTGGGTGTCACATTATCGTTCATACCATTGGGACAACATTCATGGTATAGCTACTAA 1173
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ATGGTTCCGCCCAAATCCACTGTGTTGCAAGCATCATGGTCAGAAAGTATGTGGTAGTGG 1145
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GTGGTTCCGCCCAAACCCAATATGCTGCAAACATCAAGATCAGAGCATGTGTGGGAGTGG 1233
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      GAACTTGCACAAGGTAGAATTAACAGATATTTCTCTAGAACCCATCATTGAAGTGAGTTT 1205
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CAGCATGGACAAGGCAGAACTGCTAGATGTTTCTCTTCAACCAATCATTGAAGTGTATTT 1293
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ACTGTGCCAAGTTTCACCTCCTGGGTTCAGAGAACAGGGAACAATTGTTGAGGGTAAA-- 1263
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GGAGCGTCAAATCACACAATTTAGATGCAACAGTCAGAGGGCAGCTATACAAGGAAAAAA 1353
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ----------------------------------TCTTCACTTAAAGAATTTCCGCATCT 1289
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CAATAAACAGAGAGCAGCTGTACGAGGAAAAAGATGTTATCCAAGAAGGCCTTCACATCT 1413
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      GAATGTTATCCTTGTCTATACGCCCCATGGCTCTTCAGAAGACCTATTCCCAGCAGTTGA 1349
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GAAACTTGGGGTTCTTTTTTTGCCTCATAGCTCTTCAAATGACCTTCTGCCTGCAGCTGA 1473
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TAGTACTGTGATTGAGGTGATTAATGGTAACGAGCAACATTGCTTGCACACAAATGTT-- 1407
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GAGTTCTGCAGTAGAGGTGATCAATGGCGAGGAGCAGCCTTGGTATCACAGAAACATTAC 1533
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ---------------------CATGCTGCCAAGGGCTGTAGATTGTTTTCGTCAGAATGC 1446
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CCTGGAACAGCTAGACAAGGTCATGCTGCCAAAGGCAATAGGTAGCATCAATCAGAATTC 1593
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      AAAAGCAACAGCGTATCAGATGCTTTGGAAGTCTAAACATGGTGGTGCATTTCTTCAGGC 1506
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TGAAGCAACAGCACACCAGCTTCTCTGGAAGTCAAAACATGAAGCTGCATTCTTTCATTT 1653
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TGTGAAGGCAACAATGAACATGCGGAGCACACGGAGAACCATTCGAGGAGCCAGGAAAGC 1566
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GGGGAAGACGAGAATGAATATGCCGAGCACATTGAGCACT---------GCTAGGGAAGC 1704
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      AAAGATGTTGCGACGACATGATCGCCGGACACACAATCACAGACATGAGGTCGCTGACTT 1626
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      AACTGTGTCGAGACGACAGGAACTTGATCTGGAGAGCCGGGCAGATGTGATCTCTGAGTT 1764
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      CCTCAGCCTTTGGGCTGTGCATGCACCTGTCCGGCTTCAGGGCTCACTCCTTGACTGGAT 1686
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CCTCAAGTTGTGGGTTGAGCGTGCGCCTGTCCAGATGCAGCGCTCAATTGTAGACTGGAT 1824
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TCGGAAGGAGAAGAAAGTA--------GCAGGTCCTCTACTGACATTTTAGATGATGTAA 1738
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TCAGAAAGAGAAGGAAGTGCAGTTAGCGCCAACACCATTCTAGAATTCTAGATCATGTAA 1884
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TAGGGACTAG-AAGGGAAACAGGGATAATTAAAATTAAAAGAATGGGGGAGAAAAGTAA- 1796
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GAGAGATCGATGAGGGTAACAAGGGGAATGGATAGGAAGTTCTTCATGATGAGAAATGAG 1944
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      -CATGTAGGGAGTTGGTTTCTAAGTACTTAGGAGT---GTATTCATCTGAAATGTTCTAC 1852
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CCTTGTTCAGTCTTAATTTCTAAGCCAGCAATAACTTGGTATGTACAATAGGGTTTCATG 2004
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ATATACTGCTGTTGTTTGTCTCGTCAGTTATGTTGGCAAA-TGGTGATAACATGATGTTC 1911
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      AAAGTGAAGCACAGTCTGTTCAGCTCAGCATATAAGCAAGCTGGTAATAACATGGTGTTG 2064
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      TTGCCCTAGAAGTCTAATGTACCAGCCT--TGCTCATTCGATGTGTCTG----------- 1958
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      AAATATTACGCAAGAAATCCGTTCACTGGATGGGTAATCGTTCTTTTTATCTGAATTTTT 2124
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTTGTCTAATCTTTTGCCATCATTGAAAGTGTGATGATGATATTGATATATAGTTTATGT 2184
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTCTAGTCTCAACCTGTTGGCTGTTACTATTTCGTACTCAACCTGTTGCCCGGCATTTCA 2244
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GATTTCCATGCACAGTCAATGGCATGAAAATTCTGAAAACAAGTCCAACGTTTTACTGGT 2304
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTAGCTAGTTTCTTCTATCACTGATATTTCACGGCCCTTCTAGAAGAAAAAAAAAATTCT 2364
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      AAACCGAGGTACGACTTGATCAAGAGTTCATTAAGATAATAAAAGACTTGATTAGTCCCT 2424
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTCCCATCATGATGATTCCCTGGAAAATGAAACAAATTATAACTAGCACTTTCCAGTAAT 2484
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GTTGCTTGTGCAGGAGAAGGAAGGTTGCCGTTCTTTTTCTCGTGCTCCATGCAGACCGAG 2544
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GAAGGAAACGTCATGCCCAGGCGATCTCGCCGGCGCAGCTTATCGATCCCAGATTATTCT 2604
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      GCGGCAGCGACCACGTCGGCGGCTCCGCCATGGATGATCGGCGAGGAAACGTGCCGACGA 2664
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      ATGGGTCGTGTATTTTCTTAAAAAAAGAAAAAACCGAACCAAGGGGTTCGGAGATTAAAA 2724
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      CTCCGACTCCTCTAACCCTCACCTTTTTTTTTCGAGTGGAACGATGATTTATCGCTTCAT 2784
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      ------------------------------------------------------------
consensus_11278#2      ------------------------------------------------------------
consensus_11278#0      TTTTCTCTCTCCCTGCAGAGAACCGAATGTAACTAATCGATTAGAGAGCAATCCTGCATG 2844
consensus_11278#3      ------------------------------------------------------------
                                                                                   

consensus_11278#1      --------------------
consensus_11278#2      --------------------
consensus_11278#0      CAATCGACCAAAACCCAATT 2864
consensus_11278#3      --------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)