These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1047 fasta sequence [TCCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGC-GCCCG-CGAGGCGGCGA-TGCCGGCGGCGT-GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG-GTTGGAGGCATTGGAGG-AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA-TGGAAAATCAAAATC-TTTCGCGTGTCT-CAAGGAAGCTGTTT-CATC-TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG-AATCTCCTTGCATACAGCAT-CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG-CATCG-AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT-CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA-GGGGGGAGTTTGATGGTG-TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT-GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTATACAAAAAAAAA] [+] EMBL C27674 [TCCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTC GNTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCC CCGA AGAGGCGGCGANTGCC GCGGCGTNGCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGG CTCGCGGGNTTTGGANGCATTTGAGGAAGGCG TTTCCATNCGACGTAGCATCTNCAAATTCTACAATTGGAAAATCAAAATCTTTTCGCGT ] [+] EMBL AK061399 [ CCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATTAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGCGGCCCG CGAGGCGGCGA TGCCGGCGGCGT GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG GTTGGAGGCATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TGGAAAATCAAAATC TTTCGCGTGTCT CAAGGAAGCTGTTT CATC TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAATTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTG ] [+] EMBL C73068 [ CAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGC GCNCGACGAGGCGGCGA TGCCGGCGGCGT GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG GTTGGAGG ATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TTGGAAATC AAATC TTTCGCGTGTCT CAAGGAA NTGTTT CATC TTGTGGCTCTNCA ] [+] EMBL CA764785 [ aaggggGGG GTTGGAGGCATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TGGAAAATCAAAATC TTTCGCGTGTCT CAAGGAAGCTGTTT CATC TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCCTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGACTAGCGTAGTATTCTTGATGTTTCACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGATGGGCCTAAGCCCTAANGTGTATGTCTGTATCATGCAAATTAACATTTGTA ] [+] EMBL AU094132 [ TTTCGCGTGTCTCCAAGGAAGCTGTTTCCATC TTGTGGCTCTGCAAAGGACATCGNGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAGAAATCTCCTTGCATACAGCATCCATGTATGAAACTTCACAGGAGACAGCAGCACAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTAaaaaa ] [+] EMBL AU092605 [ GTGTCTCCAAGGAAGCTGTTT CATCTTTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAGCCATCGAAAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGATCCCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTATACAAAAA ] [-] EMBL CA760690 [ agGGGAG AATCTCCTGGCATACAGCAT CATGTATGAAACTTCCCAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGATGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCCTGCTAATGATGAAAATTTTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATNTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGACTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATATAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTAAAAAAAAAAAAA] [+] EMBL OS0411A [ AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAAGGGGGGGAGTTTGATGGTGTTTGTCTGTGCCTGCAAGAT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||