cluster # 11284

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Oryza sativa
cluster # 11284 cluster # 11284 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11284#0 length = 1047 sequences # 8
consensusID : consensus_11284#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1047
fasta sequence
                              [TCCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGC-GCCCG-CGAGGCGGCGA-TGCCGGCGGCGT-GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG-GTTGGAGGCATTGGAGG-AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA-TGGAAAATCAAAATC-TTTCGCGTGTCT-CAAGGAAGCTGTTT-CATC-TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG-AATCTCCTTGCATACAGCAT-CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG-CATCG-AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT-CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA-GGGGGGAGTTTGATGGTG-TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT-GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTATACAAAAAAAAA]

[+] EMBL C27674               [TCCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTC GNTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCC    CCGA AGAGGCGGCGANTGCC GCGGCGTNGCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGG CTCGCGGGNTTTGGANGCATTTGAGGAAGGCG TTTCCATNCGACGTAGCATCTNCAAATTCTACAATTGGAAAATCAAAATCTTTTCGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AK061399             [ CCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATTAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGCGGCCCG CGAGGCGGCGA TGCCGGCGGCGT GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG GTTGGAGGCATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TGGAAAATCAAAATC TTTCGCGTGTCT CAAGGAAGCTGTTT CATC TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAATTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTG                                             ]
[+] EMBL C73068               [                          CAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGGGTGTCCCGACCGCGATCAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACGTCGGCCGCGCCGC GCNCGACGAGGCGGCGA TGCCGGCGGCGT GCAGCTCGTCCTCGATTGGGAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCAGAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGG GTTGGAGG ATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TTGGAAATC AAATC TTTCGCGTGTCT CAAGGAA NTGTTT CATC TTGTGGCTCTNCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA764785             [                                                                                                                                                                                                                                                                               aaggggGGG GTTGGAGGCATTGGAGG AGGCGCTTCCCATCCGACGTAGCATCTCCAAATTCTACAA TGGAAAATCAAAATC TTTCGCGTGTCT CAAGGAAGCTGTTT CATC TTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCCTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGACTAGCGTAGTATTCTTGATGTTTCACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGATGGGCCTAAGCCCTAANGTGTATGTCTGTATCATGCAAATTAACATTTGTA                                           ]
[+] EMBL AU094132             [                                                                                                                                                                                                                                                                                                                                                                    TTTCGCGTGTCTCCAAGGAAGCTGTTTCCATC TTGTGGCTCTGCAAAGGACATCGNGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAGAAATCTCCTTGCATACAGCATCCATGTATGAAACTTCACAGGAGACAGCAGCACAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTAaaaaa            ]
[+] EMBL AU092605             [                                                                                                                                                                                                                                                                                                                                                                          GTGTCTCCAAGGAAGCTGTTT CATCTTTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATATTCGAGAAAACGGAAG AATCTCCTTGCATACAGCAT CATGTATGAAACTTCACAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAGCCATCGAAAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGATCCCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTATACAAAAA    ]
[-] EMBL CA760690             [                                                                                                                                                                                                                                                                                                                                                                                                                                                        agGGGAG AATCTCCTGGCATACAGCAT CATGTATGAAACTTCCCAGGAGACAGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTCTTTGATGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAG CATCG AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCCTGCTAATGATGAAAATTTTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATNTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGACTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAA GGGGGGAGTTTGATGGTG TTGTCTGTGCCTGCAAGATGATTGGGGCTACTGTGTTGTATATAAATTAGCATACTACATACTGATATCGAT GGCCTAAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTCTAGTACCTTATATTAAAAAAAAAAAAA]
[+] EMBL OS0411A              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAGAAACCGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGTTTATAATGCTCCAGCACTACAATTAGGAT CCTGTGATCCTAAAACATCATCTGTGCCTGTGAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCTCAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGTGTCTTTCTGTATTGTGAATAAATAAGGGGGGGAGTTTGATGGTGTTTGTCTGTGCCTGCAAGAT                                                                                                                                                  ]




>consensus_11284#0
TCCTCTCTCTCGCCTCTCGCTCTCTCCAAATCTGTGCGCGGTTGTGTGCGGTGATCCGGG
GTGTCCCGACCGCGATCAGGGCCGTCGGCTTCGGGTCGGACGGACGGATGCCGGTGGACG
TCGGCCGCGCCGCGCCCGCGAGGCGGCGATGCCGGCGGCGTGCAGCTCGTCCTCGATTGG
GAAGGACAGCGACGAGTGCTCGCCGCCGGGGAAGGAGGAGGAGGAGGGGGAGGAGGTGCA
GAGCGCGTTCGTCGGGGGAGGAGGGGGCCTCGCGGGGTTGGAGGCATTGGAGGAGGCGCT
TCCCATCCGACGTAGCATCTCCAAATTCTACAATGGAAAATCAAAATCTTTCGCGTGTCT
CAAGGAAGCTGTTTCATCTTGTGGCTCTGCAAAGGACATCGCGAAGGCAGAGAGCGCATA
TTCGAGAAAACGGAAGAATCTCCTTGCATACAGCATCATGTATGAAACTTCACAGGAGAC
AGCAGCAGAAGTTTATGAAACTGGACCCCCTAAGAGGCTTGCCAGTCTGAGCAGAAACTC
TTTGGTGACCTTGGCTAGTAGCAGTTCCAGGAGCAGCAGTAGTATCAGCATCGAAGAAAC
CGAGCTCACTGAGCAGCTTCATTCTCCTCCGTCGCTTGCTAATGATGAAAATTCTGCGGT
TTATAATGCTCCAGCACTACAATTAGGATCCTGTGATCCTAAAACATCATCTGTGCCTGT
GAGGTCATTTTCAATGATGGATTTGCGCCGTCTGCATAGGCCAAGATCCTCATGTCGTCT
CAAAGATCAGAAAACGACAGAGTAGCGTAGTATTCTTGATGTTTTACTGGGGCTGCTAGT
GTCTTTCTGTATTGTGAATAAATAAGGGGGGAGTTTGATGGTGTTGTCTGTGCCTGCAAG
ATGATTGGGGCTACTGTGTTGTATGTAAATTAGCATACTACATACTGATATCGATGGCCT
AAGCCCTAAGGTGTATGTCTGTATCATGCAAATTAACATTTGTAAATTAACTAAATCCTC
TAGTACCTTATATTATACAAAAAAAAA
clustalw multiple alignements is not computed in this case