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Oryza sativa
cluster # 11295 cluster # 11295       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11295#0 length = 2071 sequences # 5  
consensus_11295#1 length = 497 sequences # 1  
consensus_11295#2 length = 308 sequences # 1  
consensus_11295#3 length = 207 sequences # 1  

consensusID : consensus_11295#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2071
fasta sequence
                              [TTTCCTATCCATCTCCTCCGCCCTCCTTTCTTCTCCGGCCGCGCGCCGCACGGCCCACCTGCAGCCACCCAGCAAAGCCGCCGCGCGCGTCCTTCTCGCTCTAGGGTTTTCCCACACGACAACCCCCCAAGCATGTCGGCGCCGCCGTTGCTGAAGGCTCCGGCCGCCGCCGCCGCCTCCCTCGTCGCGGCGGCCGCGGCCCACCGCGCTACGGCCGCCGCCGCCGCCCCGTCCGGTGCGTCCCGCGTCCCGCCGCGACGCTTGCGCTGCTCTGCATCAGGCGCCGCCGCCGTCGAGGTGCGTGCTCCGATGGATTGGGCGACGAGGTCGCTGGAGGAGATGCAGCGGGCAGAGGACTTCGACTCTTTCTGCCTGATGGGGCTTTCGCCGCTGGATGGGCGGTACGAGCGCTTTACCAGGGACCTGAAACCCTTCTTCAGTGAGTTCGGCCTCATCAGATACCGGGTCATCGTTGAGGTAAAGTGGCTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGGTGCCTCCATTCAGCAAGGAGGCCCAGTTATTCCTGGATGCGATTATCCAGGATTTCAGTGTTGCTGATGCAAAAGAAGTGAAAAAGATTGAGAAAACAACCAACCATGATGTGAAGGCTGTTGAGTACTTTCTCAAGCAAAAATGCAGCTCAAATCCAGAGATTGCAAA-GGTGTTGGAGTTCTTCCATTTTGGATGTACTTCTGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACAGTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAATTCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGAAAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTCAAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATATCCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTT-GGAGTTCAATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTTGTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTAGGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAAGTCAATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTGTCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCGACTGTTTTGAGAAATTTGGGTGTTGGATTAGGGCATTCACTCTTGGCTTACAAAGCTACATTGCGAGGAATCAATAAGGTTCAGGTGAATGAATCCCGGTTATCTGAAGACTTGGATCAAACATGGGAGGTCCTTGCAGAGCCAATACAGACAGTGATGCGAAGGTATGGAATCCCTGAACCTTATGAGAAGCTGAAGGAAATGACCAGAGGGCAGGCTGTCACCAAGGACAGCATACGGCAATTCATTGAAGATCTAGACTTGCCAGAGGCGGCACGATCGTCGCTTCTGAAGCTAACACCACATTCTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATCTAAAATCTGGATTTAAGATCGAGTGAGCACCCGTTCCGGAACTCGGTAATCCCCCCAAATTTTTTACCAGGACAGGAAGAATAACGGGCGAAAATCTTCAAAGCTGAGGGTGAACACCGAATTGTGTCCTGACCTTTAACAACTTCCGGTTACGCTAATTCAGCTGTGCTGATTGAAAGGCTTTTGGATGCACGCAAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATCAGAAGCAGGATAAATCTTGCTCGCCTGTCTTTTTCAATCGCAAGTGGCCTTGCTACAGTCTTCATTAATGCAGCATTCGCCTTTGCATCGA]

[+] EMBL AK067474             [TTTCCTATCCATCTCCTCCGCCCTCCTTTCTTCTCCGGCCGCGCGCCGCACGGCCCACCTGCAGCCACCCAGCAAAGCCGCCGCGCGCGTCCTTCTCGCTCTAGGGTTTTCCCACACGACAACCCCCCAAGCATGTCGGCGCCGCCGTTGCTGAAGGCTCCGGCCGCCGCCGCCGCCTCCCTCGTCGCGGCGGCCGCGGCCCACCGCGCTACGGCCGCCGCCGCCGCCCCGTCCGGTGCGTCCCGCGTCCCGCCGCGACGCTTGCGCTGCTCTGCATCAGGCGCCGCCGCCGTCGAGGTGCGTGCTCCGATGGATTGGGCGACGAGGTCGCTGGAGGAGATGCAGCGGGCAGAGGACTTCGACTCTTTCTGCCTGATGGGGCTTTCGCCGCTGGATGGGCGGTACGAGCGCTTTACCAGGGACCTGAAACCCTTCTTCAGTGAGTTCGGCCTCATCAGATACCGGGTCATCGTTGAGGTAAAGTGGCTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGGTGCCTCCATTCAGCAAGGAGGCCCAGTTATTCCTGGATGCGATTATCCAGGATTTCAGTGTTGCTGATGCAAAAGAAGTGAAAAAGATTGAGAAAACAACCAACCATGATGTGAAGGCTGTTGAGTACTTTCTCAAGCAAAAATGCAGCTCAAATCCAGAGATTGCAAA GGTGTTGGAGTTCTTCCATTTTGGATGTACTTCTGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACAGTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAATTCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGAAAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTCAAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATATCCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTT GGAGTTCAATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTTGTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTAGGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAAGTCAATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTGTCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCGACTGTTTTGAGAAATTTGGGTGTTGGATTAGGGCATTCACTCTTGGCTTACAAAGCTACATTGCGAGGAATCAATAAGGTTCAGGTGAATGAATCCCGGTTATCTGAAGACTTGGATCAAACATGGGAGGTCCTTGCAGAGCCAATACAGACAGTGATGCGAAGGTATGGAATCCCTGAACCTTATGAGAAGCTGAAGGAAATGACCAGAGGGCAGGCTGTCACCAAGGACAGCATACGGCAATTCATTGAAGATCTAGACTTGCCAGAGGCGGCACGATCGTCGCTTCTGAAGCTAACACCACATTCTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATCTAAAATCTGGATTTAAGATCGAGTGAGCACCCGTTCCGGAACTCGGTAATCCCCCCAAATTTTTTACCAGGACAGGAAGAATAACGGGCGAAAATCTTCAAAGCTGAGGGTGAACACCGAATTGTGTCCTGACCTTTAACAACTTCCGGTTACGCTAATTCAGCTGTGCTGATTGAAAGGCTTTTGGATGCACGCAAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATCAGAAGCAGGATAAATCTTGCTCGCCTGTCTTTTTCAATCGCAAGTGGCCTTGCTACAGTCTTCATTAATGCAGCATTCGCCTTTGCATCGA]
[+] EMBL CF323016             [                                                                                                                                                                                                                                                                                                                                                              AGAGGACTTCGACTCTTTCTGCCTGATGGGGCTTTCGCCGCTGGATGGGCGGTACGAGCGCTTTACCAGGGACCTGAAACCCTTCTTCAGTGAGTTCGGCCTCATCAGATACCGGGTCATCGTTGAGGTAAAGTGGCTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGGTGCCTCCATTCAGCAAGGAGGCCCAGTTATTCCTGGATGCGATTATCCAGGATTTCAGTGTTGCTGATGCAAAAGAAGTGAAAAAGATTGAGAAAACAACCAACCATGATGTGAAGGCTGTTGAGTACTTTCTCAAGCAAAAATGCAGCTCAAATCCAGAGATTGCAAAGGGTGTTGGAGTTCTTCCATTTTGGATGTACTTCTGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACAGTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAATTCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGAAAAGAGATGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF326615             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   cgagGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACAGTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAATTCAACCATCCCTATGCTGTCGCGAACTTTTGGACAGCCAGCATCGCCAACAACTCTGGGAAAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTCAAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATATCCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTT GGAGTTCAATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTTGTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTAGGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAAGTCAATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTGTCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF324183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AATACAGTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAATTCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGAAAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTCAAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATATCCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTTGGGAGTTCAATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTTGTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTAGGCTACTTCAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF330259             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTCAATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTTGTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTAGGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAAGTC ATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTGTCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCGACTGTTTTGAGAAATTTGGGTGTTGGATTAGGGCATTCACTCTTGGCTTACAAAGCTACATTGCGAGGAATCAATAAGGTTCAGGTGAATGAATCCCGGTTATCTGAAGACTTGGATCAAACATGGGAGGTCCTTGCAGAGCCAATACAGACAGTGATGCGAAGGTATGGAATCCCTGAACCTTATGAGAAGCTGAAGGAAATGACCAGAGGGCAGGCTGTCACCAAGGACAGCATACGGCAATTCATTGAAGATCTAGACTTGCCAGAGGCGGCACGATCGTCGCTTCTGAAGCTAACACCACATTCT                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_11295#0 TTTCCTATCCATCTCCTCCGCCCTCCTTTCTTCTCCGGCCGCGCGCCGCACGGCCCACCT GCAGCCACCCAGCAAAGCCGCCGCGCGCGTCCTTCTCGCTCTAGGGTTTTCCCACACGAC AACCCCCCAAGCATGTCGGCGCCGCCGTTGCTGAAGGCTCCGGCCGCCGCCGCCGCCTCC CTCGTCGCGGCGGCCGCGGCCCACCGCGCTACGGCCGCCGCCGCCGCCCCGTCCGGTGCG TCCCGCGTCCCGCCGCGACGCTTGCGCTGCTCTGCATCAGGCGCCGCCGCCGTCGAGGTG CGTGCTCCGATGGATTGGGCGACGAGGTCGCTGGAGGAGATGCAGCGGGCAGAGGACTTC GACTCTTTCTGCCTGATGGGGCTTTCGCCGCTGGATGGGCGGTACGAGCGCTTTACCAGG GACCTGAAACCCTTCTTCAGTGAGTTCGGCCTCATCAGATACCGGGTCATCGTTGAGGTA AAGTGGCTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGGTGCCTCCATTCAGCAAG GAGGCCCAGTTATTCCTGGATGCGATTATCCAGGATTTCAGTGTTGCTGATGCAAAAGAA GTGAAAAAGATTGAGAAAACAACCAACCATGATGTGAAGGCTGTTGAGTACTTTCTCAAG CAAAAATGCAGCTCAAATCCAGAGATTGCAAAGGTGTTGGAGTTCTTCCATTTTGGATGT ACTTCTGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACA GTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAAT TCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGA AAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTC AAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATAT CCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTTGGAGTTC AATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTT GTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTA GGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAA GTCAATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTG TCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCGACT GTTTTGAGAAATTTGGGTGTTGGATTAGGGCATTCACTCTTGGCTTACAAAGCTACATTG CGAGGAATCAATAAGGTTCAGGTGAATGAATCCCGGTTATCTGAAGACTTGGATCAAACA TGGGAGGTCCTTGCAGAGCCAATACAGACAGTGATGCGAAGGTATGGAATCCCTGAACCT TATGAGAAGCTGAAGGAAATGACCAGAGGGCAGGCTGTCACCAAGGACAGCATACGGCAA TTCATTGAAGATCTAGACTTGCCAGAGGCGGCACGATCGTCGCTTCTGAAGCTAACACCA CATTCTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATCTA AAATCTGGATTTAAGATCGAGTGAGCACCCGTTCCGGAACTCGGTAATCCCCCCAAATTT TTTACCAGGACAGGAAGAATAACGGGCGAAAATCTTCAAAGCTGAGGGTGAACACCGAAT TGTGTCCTGACCTTTAACAACTTCCGGTTACGCTAATTCAGCTGTGCTGATTGAAAGGCT TTTGGATGCACGCAAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATC AGAAGCAGGATAAATCTTGCTCGCCTGTCTTTTTCAATCGCAAGTGGCCTTGCTACAGTC TTCATTAATGCAGCATTCGCCTTTGCATCGA



consensusID : consensus_11295#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 497
fasta sequence
                              [TCCCTGACCCTTATGAGAAGTTGAAGGAAATGCCCAGAGGGCAGGTTGTCCCCAAGGCCAGCATACGGCAATTCATTGAAGATTTAGACTTGCCAAAGGCGGCACGATCGTCGTTTTTGAAGCTAACCCCCCATTTTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATTTAAAATTTGGATTTAAGATCGAGTGAGCCCCCGTTCCGGAACTCGGTAATCCCCCCAAATTTTTTACCAGGACAGGAAGAATAACGGGCGAAATTTTTCAAAGCTGAGGGTGAACCCCGAATTGTGTCCTGCCCTTCAACAATTTCCGGTTACGTTAATTCAGCTGTGCTGATTGAAAGGCTTTTGGATGCACGCAAAATGCATCCGTGGAATTTGTCCCATGGGTGTTTCGGAATAAAATCAGAAGCAGGATAAATTTTGCTCGCCTGTTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CF330260             [TCCCTGACCCTTATGAGAAGTTGAAGGAAATGCCCAGAGGGCAGGTTGTCCCCAAGGCCAGCATACGGCAATTCATTGAAGATTTAGACTTGCCAAAGGCGGCACGATCGTCGTTTTTGAAGCTAACCCCCCATTTTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATTTAAAATTTGGATTTAAGATCGAGTGAGCCCCCGTTCCGGAACTCGGTAATCCCCCCAAATTTTTTACCAGGACAGGAAGAATAACGGGCGAAATTTTTCAAAGCTGAGGGTGAACCCCGAATTGTGTCCTGCCCTTCAACAATTTCCGGTTACGTTAATTCAGCTGTGCTGATTGAAAGGCTTTTGGATGCACGCAAAATGCATCCGTGGAATTTGTCCCATGGGTGTTTCGGAATAAAATCAGAAGCAGGATAAATTTTGCTCGCCTGTTTTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11295#1 TCCCTGACCCTTATGAGAAGTTGAAGGAAATGCCCAGAGGGCAGGTTGTCCCCAAGGCCA GCATACGGCAATTCATTGAAGATTTAGACTTGCCAAAGGCGGCACGATCGTCGTTTTTGA AGCTAACCCCCCATTTTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGG TGGTTGATTTAAAATTTGGATTTAAGATCGAGTGAGCCCCCGTTCCGGAACTCGGTAATC CCCCCAAATTTTTTACCAGGACAGGAAGAATAACGGGCGAAATTTTTCAAAGCTGAGGGT GAACCCCGAATTGTGTCCTGCCCTTCAACAATTTCCGGTTACGTTAATTCAGCTGTGCTG ATTGAAAGGCTTTTGGATGCACGCAAAATGCATCCGTGGAATTTGTCCCATGGGTGTTTC GGAATAAAATCAGAAGCAGGATAAATTTTGCTCGCCTGTTTTTTTCAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAA



consensusID : consensus_11295#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 308
fasta sequence
                              [TANGTTACTGGGCCTGAGGTNTTAAAGCGGGGCACGGCTAGCGCGCGCGGCCGTCGTGGTCCGGGTCCGCGGACTGGCTGTCTGATCAGGGCGCGCGTCGAGTGGTGTCGATGATGGCGAAGTCGTGAGGAGATGCAGGGCAGANGATTCGATCTTCTGCTGATGGGTTCGCGTGATGGGGGTACGAGCGCTTACAGGACTGAAACCTTCTTCAGTGAGTCGGCTCATCAGATACCGGGTCATCGTTGAGGTAAAGTGGTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGTGCTCCATTCAGCA]

[-] EMBL BI806049             [TANGTTACTGGGCCTGAGGTNTTAAAGCGGGGCACGGCTAGCGCGCGCGGCCGTCGTGGTCCGGGTCCGCGGACTGGCTGTCTGATCAGGGCGCGCGTCGAGTGGTGTCGATGATGGCGAAGTCGTGAGGAGATGCAGGGCAGANGATTCGATCTTCTGCTGATGGGTTCGCGTGATGGGGGTACGAGCGCTTACAGGACTGAAACCTTCTTCAGTGAGTCGGCTCATCAGATACCGGGTCATCGTTGAGGTAAAGTGGTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGTGCTCCATTCAGCA]


>consensus_11295#2 TANGTTACTGGGCCTGAGGTNTTAAAGCGGGGCACGGCTAGCGCGCGCGGCCGTCGTGGT CCGGGTCCGCGGACTGGCTGTCTGATCAGGGCGCGCGTCGAGTGGTGTCGATGATGGCGA AGTCGTGAGGAGATGCAGGGCAGANGATTCGATCTTCTGCTGATGGGTTCGCGTGATGGG GGTACGAGCGCTTACAGGACTGAAACCTTCTTCAGTGAGTCGGCTCATCAGATACCGGGT CATCGTTGAGGTAAAGTGGTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGTGCTCC ATTCAGCA



consensusID : consensus_11295#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [TAACAACTTCCGGTTACGCTAATTCAGCTGTTGCCTGATTTGAAAGGCCTTTTGGGATTGCCACGGCAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATCAGAAGCAGGATAAATCTTGCTCGCCTGTCTTTTTCATCGCAAGTGCCTGCTACAGTCTCATATGCACATTCCCTTGCATCGACAGGCTACGAAA]

[+] EMBL BI804682             [TAACAACTTCCGGTTACGCTAATTCAGCTGTTGCCTGATTTGAAAGGCCTTTTGGGATTGCCACGGCAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATCAGAAGCAGGATAAATCTTGCTCGCCTGTCTTTTTCATCGCAAGTGCCTGCTACAGTCTCATATGCACATTCCCTTGCATCGACAGGCTACGAAA]


>consensus_11295#3 TAACAACTTCCGGTTACGCTAATTCAGCTGTTGCCTGATTTGAAAGGCCTTTTGGGATTG CCACGGCAAATGCATCCGTGGAATTTGTGCCATGCGTGTTTCGGAATAAAATCAGAAGCA GGATAAATCTTGCTCGCCTGTCTTTTTCATCGCAAGTGCCTGCTACAGTCTCATATGCAC ATTCCCTTGCATCGACAGGCTACGAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TTTCCTATCCATCTCCTCCGCCCTCCTTTCTTCTCCGGCCGCGCGCCGCACGGCCCACCT 60
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GCAGCCACCCAGCAAAGCCGCCGCGCGCGTCCTTCTCGCTCTAGGGTTTTCCCACACGAC 120
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AACCCCCCAAGCATGTCGGCGCCGCCGTTGCTGAAGGCTCCGGCCGCCGCCGCCGCCTCC 180
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CTCGTCGCGGCGGCCGCGGCCCACCGCGCTACGGCCGCCGCCGCCGCCCCGTCCGGTGCG 240
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TCCCGCGTCCCGCCGCGACGCTTGCGCTGCTCTGCATCAGGCGCCGCCGCCGTCGAGGTG 300
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CGTGCTCCGATGGATTGGGCGACGAGGTCGCTGGAGGAGATGCAGCGGGCAGAGGACTTC 360
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GACTCTTTCTGCCTGATGGGGCTTTCGCCGCTGGATGGGCGGTACGAGCGCTTTACCAGG 420
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GACCTGAAACCCTTCTTCAGTGAGTTCGGCCTCATCAGATACCGGGTCATCGTTGAGGTA 480
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AAGTGGCTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGGTGCCTCCATTCAGCAAG 540
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GAGGCCCAGTTATTCCTGGATGCGATTATCCAGGATTTCAGTGTTGCTGATGCAAAAGAA 600
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GTGAAAAAGATTGAGAAAACAACCAACCATGATGTGAAGGCTGTTGAGTACTTTCTCAAG 660
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CAAAAATGCAGCTCAAATCCAGAGATTGCAAAGGTGTTGGAGTTCTTCCATTTTGGATGT 720
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      ACTTCTGAAGATATCAACAACTTGTCACATGCATTAGCTCTAAAAGAGGGGGTAAATACA 780
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GTTATGTTCCCTGTTATGATGGACATATGCAAAGCAATGTGCTCCTTGGCAACACAAAAT 840
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TCAACCATCCCTATGCTGTCGCGAACTCATGGACAGCCAGCATCGCCAACAACTCTGGGA 900
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AAAGAGATGGCGAATTTTGCGGCCAGATTGTCAAGCATAGGAAATAGTTTTTCTGAGGTC 960
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AAGATACTAGGGAAATTCGCTGGAGCTGTCGGAAATTACAACGCTGATGTTGTTGCATAT 1020
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CCAGAAGTTGACTGGCCTAAGGTTGCAGAAGATTTTGTCAAATCGTTGGGCTTGGAGTTC 1080
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AATCCTTATGTTACCCAGATTGAGCCACATGACTATATCTCGAAGCTCTTCAATCTATTT 1140
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GTTCAGTTTAACAATGTCTTGACTGATTTCGATAGAGACATGTGGACCTATATATCACTA 1200
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GGCTACTTCAAGCAGATAGTAAAGGCTGGTGAAGTTGGATCTTCCACAATGCCTCACAAA 1260
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GTCAATCCCATTGATTTCGAAAATAGTGACGGCAATTTGACTATAGCCAATGGTACATTG 1320
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TCTTCTTTAAGCATGAAGCTACCAATTTCTCGGATGCAGCGTGATCTCACAGACTCGACT 1380
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      GTTTTGAGAAATTTGGGTGTTGGATTAGGGCATTCACTCTTGGCTTACAAAGCTACATTG 1440
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      ------------------------------------------------------------
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CGAGGAATCAATAAGGTTCAGGTGAATGAATCCCGGTTATCTGAAGACTTGGATCAAACA 1500
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      -------------------------------------------------TCCCTGACCCT 11
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TGGGAGGTCCTTGCAGAGCCAATACAGACAGTGATGCGAAGGTATGGAATCCCTGAACCT 1560
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      TATGAGAAGTTGAAGGAAATGCCCAGAGGGCAGGTTGTCCCCAAGGCCAGCATACGGCAA 71
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TATGAGAAGCTGAAGGAAATGACCAGAGGGCAGGCTGTCACCAAGGACAGCATACGGCAA 1620
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      TTCATTGAAGATTTAGACTTGCCAAAGGCGGCACGATCGTCGTTTTTGAAGCTAACCCCC 131
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TTCATTGAAGATCTAGACTTGCCAGAGGCGGCACGATCGTCGCTTCTGAAGCTAACACCA 1680
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      CATTTTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATTTA 191
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      CATTCTTATATCGGAGAGGCAGAATTTTTGGCTAGAAATATCGAAGAGGTGGTTGATCTA 1740
consensus_11295#2      ------------------------------------------------------------
                                                                                   

consensus_11295#1      AAATTTGGATTTAAGATCGAGTGAGCCCCCGTTCCGGAACTCGGTAATCCCCCCAAATTT 251
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      AAATCTGGATTTAAGATCGAGTGAGCACCCGTTCCGGAACTCGGTAATCCCCCCAAATTT 1800
consensus_11295#2      ---------------------------------------TANGTTACTGGGCCTGAGGTN 21
                                                                                   

consensus_11295#1      TTTACCAGGACAGGAAGAATAACGGGCGAAATTTTTCAAAGCTGAGGGTGAACCCCGAAT 311
consensus_11295#3      ------------------------------------------------------------
consensus_11295#0      TTTACCAGGACAGGAAGAATAACGGGCGAAAATCTTCAAAGCTGAGGGTGAACACCGAAT 1860
consensus_11295#2      TTAAAGCGGGGCACGGCTAGCGCGCGCGGCCGTCGTGGTCCGGGTCCGCGGACTGGCTGT 81
                                                                                   

consensus_11295#1      TGTGTCCTGCCCTTCAACAATTTCCGGTTACGTTAATTCAGCTGTG--CTGATT---GAA 366
consensus_11295#3      --------------TAACAACTTCCGGTTACGCTAATTCAGCTGTTGCCTGATTT--GAA 44
consensus_11295#0      TGTGTCCTGACCTTTAACAACTTCCGGTTACGCTAATTCAGCTGTG--CTGATT---GAA 1915
consensus_11295#2      CTGATCAGGGCGCGCGTCGAGTGGTGTCGATGATGGCGAAGTCGTGAGGAGATGCAGGGC 141
                                        * * *   *   * * *     **  **     ***    *  

consensus_11295#1      AGGCTTTT--GGAT--GCACGCAAAATGCATCCGTGGAATTTGTCC-CATGGGTGTTTCG 421
consensus_11295#3      AGGCCTTTTGGGATTGCCACGGCAAATGCATCCGTGGAATTTGTGC-CATGCGTGTTTCG 103
consensus_11295#0      AGGCTTTT--GGAT--GCACGCAAAATGCATCCGTGGAATTTGTGC-CATGCGTGTTTCG 1970
consensus_11295#2      AGANGATT--CGAT--CTTCTGCTGATGGGTTCGCGTGATGGGGGTACGAGCGCTTACAG 197
                       **    **   ***     *     ***  * ** *  **  *    *  * *  *   *

consensus_11295#1      GAATAAAA---TCAGAAGCAGGATAAATTTT--GCTCGCCTGTTTTTTTCA-AAAAAAAA 475
consensus_11295#3      GAATAAAA---TCAGAAGCAGGATAAATCTT--GCTCGCCTGTCTTTTTCA-TCGCAAGT 157
consensus_11295#0      GAATAAAA---TCAGAAGCAGGATAAATCTT--GCTCGCCTGTCTTTTTCAATCGCAAGT 2025
consensus_11295#2      GACTGAAACCTTCTTCAGTGAGTCGGCTCATCAGATACCGGGTCATCGTTGAGGTAAAGT 257
                       ** * ***   **   **   *     *  *  * *  *  **  *  *       **  

consensus_11295#1      A--AAAAAAAAAAAAAAAAAAAAA---------------------------- 497
consensus_11295#3      G--CCTGCTACAGTCTCATATGCACATTCCCTTGCATCGACAGGCTACGAAA 207
consensus_11295#0      GGCCTTGCTACAGTCTTCATTAATGCAGCATTCGCCTTTGCATCGA------ 2071
consensus_11295#2      GGTACTGAAACTCTCCCAAATCCCTGAGATCAATGAGTGCTCCATTCAGCA- 308
                                *                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)