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Oryza sativa
cluster # 11315 cluster # 11315       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11315#0 length = 2018 sequences # 7  
consensus_11315#1 length = 139 sequences # 1  

consensusID : consensus_11315#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2018
fasta sequence
                              [TTCTTGCCTCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTGTTGACGCTGCGGCCTCTTCCCGACCGCGCAGNAAAGATTTGAGGTCACCAATGGATGATTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTCTTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTC-AAAAGTACAA-CCCTTACGT-GATTTTC-AAAGGT-GAACAAC-TCCCGGTTCCTATATGGGGACTGCCAGAGGAGAAGGTCCAAGNTTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGTCGAGTTGAAGCCAGGAAGACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAAAGGGGACATGGATATAAATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAGGAAGTCAAGGTTTCTCTAGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCGAATCAGCGGGAAGTTGCATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTTGGGGCTGGATTGAACATCTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGGGATCAAAGTAAATCAGATCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGGGGCTCTTTGGGTATAATAGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAATTGACAAATGGCAAATCGATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGACCAGATCAAAGATGTTTGTGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTGGAAAAGCATACAATGTTGAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGTATAATTCTGACAGGATGTGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTGAAACAACGCACTGGACTACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGCTACGTATGCTAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATCTATTTGTTGGGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAACTACTCACGTTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTTGTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAG-CCAGTGAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTCTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCGAACTTCTAAGTGCGGTATTATTGTTAAGAGTAAATTGCAACTTGTGCCCAAAAAAAAAA]

[+] EMBL AK101363             [TTCTTGCCTCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTGTTGACGCTGCGGCCTCTTCCCGACCGCGCAGCAAAGATTTGAGGTCACCAATGGATGATTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTCTTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTC AAAAGTACAA CCCTTACGT GATTTTC AAAGGT GAACAAC TCCCGGTTCCTATATGGGAACTGCCAGAGGAGAAGGTCCAAGATTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGTCGAGTTGAAGCCAGGAAGACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAAAGGGGACATGGATATAAATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAGGAAGTCAAGGTTTCTCTAGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCGAATCAGCGGGAAGTTGCATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTTGGGGCTGGATTGAACATCTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGGGATCAAAGTAAATCAGATCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGGGGCTCTTTGGGTATAATAGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAATTGACAAATGGCAAATCGATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGACCAGATCAAAGATGTTTGTGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTGGAAAAGCATACAATGTTGAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGTATAATTCTGACAGGATGTGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTGAAACAACGCACTGGACTACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGCTACGTATGCTAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATCTATTTGTTGGGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAACTACTCACGTTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTTGTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAG CCAGTGAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTCTAGCACTATTGGTACTGCAGTTGTTTTT                                                                     ]
[+] EMBL C28749               [        TCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTTTTGACGCTGCGGCCTCTTCCCGACCGCGCA NAAAGATTTGAGGTCACCAATGGATGATTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTNAGGTTTCTTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTCAAAAAGTACAACCCCTTACGTGGATTTTCAAAAGGTGGAACAACTTCCCGGTTCCTATATGGGGACTGCCAGAGGAGAAGGTCCAAGNTTTTCATGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C25860               [           CGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTGTTGACGCTGCGGCCTCTTCCCGACCGCGCAGAANAGATTTGAGGTCACCAATGGATGATTCAACGGATGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTCTTCAAGCAGATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAGTGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAGTGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTC AAAAGTACAA CCCTTACGT GATTTTC AAAGGT GAACAAC TTCCGGTTCCTATATGGGGACTGCCAGA GAGGAGGTCC AGGTTTTCATG TAGG ACTTa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB000025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TAATTCTGACAGGATGTGGCATGCCAACCCTCCCATCAAGGGATTTCCTCAGATTCTTGAAACAACGCACTGGACTACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGCTACGTATGCTAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATCTATTTGTTGGGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAACTACTCACGTTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTTGTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAG CCAGTGAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTAC                                                                                                              ]
[+] EMBL OSR16841A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGCAGGACGATTTGTCCGATGTATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTATTCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGTACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAG CCAGTNAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATC                                                                                                                                                                                                                                                                            ]
[+] EMBL BI806489             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  agaGCTTC TTTGA  CTATT ATA TTTGGG  TT A TA TTTCCAACCCATGTGC TCCGGA ATGATATAC AAGTACGAGAA GCTATGTTCAGGTTCAAGAG   ATAGAGCCTCNAGACACTGAAGCCCAGTGAGGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTCTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCGAACTTCTAAGTGCGGTATTATTGTTAAGAGTAAATTGCAACTTGTGCCCAAAAAAAAAA]
[+] EMBL AU031779             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CACTGAAN CCAGTGAGGANTGATTTGGAGGACTCTAATCCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTAAAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTCGTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTTCTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGATCGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAGTTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTCTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCGAACTTCTAAaaa                                               ]


>consensus_11315#0 TTCTTGCCTCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTGTTGACGC TGCGGCCTCTTCCCGACCGCGCAGNAAAGATTTGAGGTCACCAATGGATGATTCAACGGA TGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTCTTCAAGCAG ATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAG TGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAG TGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTCAAAAGTACAACCCTTA CGTGATTTTCAAAGGTGAACAACTCCCGGTTCCTATATGGGGACTGCCAGAGGAGAAGGT CCAAGNTTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGTCGAGTTGAAGCCAGGAA GACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAAAGGGGACATGGATATAA ATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAGGAAGTCAAGGTTTCTCT AGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCGAATCAGCGGGAAGTTGC ATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTTGGGGCTGGATTGAACAT CTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGGGATCAAAGTAAATCAGA TCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGGGGCTCTTTGGGTATAAT AGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAATTGACAAATGGCAAATC GATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGACCAGATCAAAGATGTTTG TGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTGGAAAAGCATACAATGTT GAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGTATAATTCTGACAGGATG TGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTGAAACAACGCACTGGACT ACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGCTACGTATGC TAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATCTATTTGTTG GGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAACTACTCACG TTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTTGTCCGATGT ATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTAT TCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGT ACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAGCCAGTGA GGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTA AAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTC GTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTT CTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGAT CGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAG TTATCGTCTAGGTGATCGATCTCTCCTAAGTGCTTGCACTATTGTTACTGAAGTTGTCTT CTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCGAACTTCTAAGTGCGGTATTAT TGTTAAGAGTAAATTGCAACTTGTGCCCAAAAAAAAAA



consensusID : consensus_11315#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 139
fasta sequence
                              [TCTAGGTGATCGATCTCTCCTAAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTTCTAGCACTATTGGGACTGAAGTTGTTTTTTCGCTGATCGAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU183690             [TCTAGGTGATCGATCTCTCCTAAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTTCTAGCACTATTGGGACTGAAGTTGTTTTTTCGCTGATCGAAAAAAAAAAAAAAAAAANAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_11315#1 TCTAGGTGATCGATCTCTCCTAAAGTGCTTGCACTATTGTTACTGAAGTTGTCTTTCTAG CACTATTGGGACTGAAGTTGTTTTTTCGCTGATCGAAAAAAAAAAAAAAAAAANAAAAAA AAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11315#0      TTCTTGCCTCTCGCTCAGATCCGTTCCTCCGGCGAAAAGCGACGGCGACTTTGTTGACGC 60
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGCGGCCTCTTCCCGACCGCGCAGNAAAGATTTGAGGTCACCAATGGATGATTCAACGGA 120
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGACGATTCGTATCATCCAAGAAAACACTATGCTTATGATCGTCAGGTTTCTTCAAGCAG 180
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ATGGCGTACCAGCCGCGAGTATATCAGAGGTCCCGGCCCCGAAACTCATACTACTGAGAG 240
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGCTCAAGATGGACAGGATCCACCTGCTGGAGTATATTCCTATGGTTATTTTTCTGGCAG 300
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGGTAATGATCCTCAAGTTCAAGGACACTTTGTTCCGGAGATTCAAAAGTACAACCCTTA 360
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      CGTGATTTTCAAAGGTGAACAACTCCCGGTTCCTATATGGGGACTGCCAGAGGAGAAGGT 420
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      CCAAGNTTTTCATGATAGGTACTTTATTGCAAAAGACAAGAGTCGAGTTGAAGCCAGGAA 480
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GACTCTGAATAGGTTGTTAGAGGGGAACATCAATACAATTGAAAGGGGACATGGATATAA 540
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ATTCAATATTCCAAAATATACAGATAACATGGAGTTTAATGAGGAAGTCAAGGTTTCTCT 600
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      AGCAAAAGCAGGCAAGACCATAAGCCGTTCCTTTTGCAATGCGAATCAGCGGGAAGTTGC 660
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ATCTAGGACTGGCTATACCATTGATCTAATAGAACGGACACTTGGGGCTGGATTGAACAT 720
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      CTCGAAGAGAACTGTCTTATACACAAACAAGGATCTGTTTGGGGATCAAAGTAAATCAGA 780
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TCAAGCGATCAATGACATCTGCGCTTTGACAAATATCAGAAGGGGCTCTTTGGGTATAAT 840
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      AGCAGCTGAAAAAGGAATTGTAGTTGGAAACATTTTCCTGGAATTGACAAATGGCAAATC 900
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GATTAGTTGTTCTATTGGAGTGCAGATACCACACAGGCTTGACCAGATCAAAGATGTTTG 960
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGTTGAAATAGGTTCACGCAACATAGAGTATATTCTTGTTGTGGAAAAGCATACAATGTT 1020
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GAATTATCTACTAGAGATGGACTATCACACCAATAACAACTGTATAATTCTGACAGGATG 1080
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TGGCATGCCAACCCTCCAAACAAGGGATTTCCTCAGATTCTTGAAACAACGCACTGGACT 1140
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ACCTGTCTTTGGACTTTGTGATCCAGATCCTGAAGGTATAAGTATTCTTGCTACGTATGC 1200
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TAGAGGGTCTTGCAATTCAGCATATGACAATTTCAATATTTCCGTGCCATCTATTTGTTG 1260
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GGTTGGATTGTCATCCTCAGACATGATAAAGTTGAATTTGTCTGAGACCAACTACTCACG 1320
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TTTGTCTCGCGAGGACAAAACTATGTTGAAGAACCTTTGGCAGGACGATTTGTCCGATGT 1380
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ATGGAAACGCAGAATCGAAGAAATGATAAGTTTTGACAAGAAGGCCTCTTTTGAAGCTAT 1440
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TCATAGTTTGGGGTTTGATTATTTTGCAACCAATTTGCTTCCGGATATGATTAACAAAGT 1500
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      ACGAGAAGGCTATGTTCAGGTTCAAGAGAAAAAAGAGCCTCAAGACACTGAAGCCAGTGA 1560
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GGACTGATTTGGAGGACTCTAATGCAGCTAGAGATTCAGATCCATAAGTTTCTACAAGTA 1620
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      AAAGTTGGAGCAGCAGATTGGAACTGCATGTTGATTTTTGTGGATGCTCAAGCTTCACTC 1680
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      GTATGTTTGGCTTCTGATAAGTCTGTAATAGCTTAGCAGCACAATTATTATAGTTGTCTT 1740
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      CTAGGTGATCGATCTCCTAAATACTTGCACCACTATTATTGTAGTTGTCTTTTATGTGAT 1800
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      CGATCTCCTAAGTACCTTTCTGTCTGTAATAGTTTAGCAACACCATTATTATAGTACTAG 1860
consensus_11315#1      ------------------------------------------------------------
                                                                                   

consensus_11315#0      TTATCGTCTAGGTGATCGATCTCTCCTAA-GTGCTTGCACTATTGTTACTGAAGTTGTCT 1919
consensus_11315#1      ------TCTAGGTGATCGATCTCTCCTAAAGTGCTTGCACTATTGTTACTGAAGTTGTCT 54
                             *********************** ******************************

consensus_11315#0      T-CTAGCACTATTGGTACTGCAGTTGTTTTTTCGCTGATCGAACTTCTAAGTGCGGTATT 1978
consensus_11315#1      TTCTAGCACTATTGGGACTGAAGTTGTTTTTTCGCTGATCGAA-----AAAAAAAAAAAA 109
                       * ************* **** **********************     **       *  

consensus_11315#0      ATTGTTAAGAGTAAATTGCAACTTGTGCCCAAAAAAAAAA 2018
consensus_11315#1      AAAANAAAAAAAAAAAAAAAA---------AAAAAAAAA- 139
                       *     ** *  ***    **         ********* 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)