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Oryza sativa
cluster # 11322 cluster # 11322       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11322#0 length = 2413 sequences # 6  
consensus_11322#1 length = 897 sequences # 2  

consensusID : consensus_11322#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2413
fasta sequence
                              [AAGCTGCAGCAAGAGGGAAAATCCACTAATCCCCAACTCGGAGACTCCTCCTCTCTGAAATCCGCCATTCCCTACCCCTCCGCCGCAAACACGCGCGCGTGGGGAGCTCGCGGCGAATCCAGCCTCGCCAGCCCCGGCCGCGCGGGGACGCCTTGCCCCCGATCTGGCGACGGCGGCCGCGATCTCGCCGCGCGCCTCGGCGGCTGCGGCGAATTGGGGGTGGGGGTGGGGTGGAGTGGAGTTTCGATAGGTGTGGCGGGGAGGGAGGGAGGGAGAAGGGGCGGCGTGTTGATCTGGTAGCTTCGTGGGGGTTGGGTGGATTAGATAGATGGCGGGGAAGGAGCAACAGGGGGGAGGAGGGCCGCCGCCGCCGCCGCGGGCGCCGGTGCCCGCGGCGTCGTCGCAGCCGCCGATTAAGAAGCTGGTGAGGCAGCTCGACTTCACCTCGGCGGCGTTGGCGGGTAACCCCGCGATGGCGGCGGCCGCGGCCGCCGTGTCCAGGGCGCTGCAGCCGAGGGCGGTCCCGGTGGGGTTCCCGCAGCCGCAGCAACTTAGGGCGCACCTGCCGGTGGGGGTGCCGCAGCAGCTGCATCCCCGGGGCCTGCCGGTGATGCGGTCGCACCACGTGGTGCATGTGCCGCTGCCGCGGCCGGCGGTGGCCGTGGCGGTGCCCGTGCCACAGGTTCGGCCGGCGCAGCCGCAGCCAGTGCCGCGGCCACCGGTCGCCGTTCCATTGAAACCAGAGTCACCAAAGCCACCACGGGCACGGCTTTATGAAGGGAAAGATGGCACCCCGACAAAGAAGAAGTGCTGCAACTGCAAGCACTCCAAATGTTTGAAGTTGTATTGTGAATGCTTTGCATCGGGTGTTTACTGTGATGGATGCAACTGTTCCAACTGTTTTAATAATGTTAAGAACGAGACTGCTAGGCGTGAAGCTATTGATGCTACATTGGAGCGCAACCCTGATGCATTCAGGCCTAAGATTGGGAGTAGCCCGCATGCTAACCGGAATAATATGGAGGCGGCTGGTGATCTTCCATTAGTTGGGAAGCATAATAAAGGGTGCCACTGCAAGAAGTCAGGTTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCTAACATACTTTGCTCTGAAAATTGCAAGTGTATGGATTGCAAGAATTTCGAAGGGAGTGAAGAAAGAAAAGCTCTTTTCCAAGGGGATCATAAAAATTCCATTCACATGCAGCAAGCAGCAAATGCAGCAGTAAATGGTGCTATTGGAGCAGCAGCCTTTTCTTCTCCTTCCGCATCCAGGAAGAGAAAGCACATAGATCCTTCCCTTGACCACTCGGCCAAGGAAAATGGAGCTCACAGGACTAATCATGTACCTCAGAAGAATGGAATGCCATCCGATGGCCCGCTTCCAATAAACCAGCCTGTGCATCCTCCAACATTGGGGCCCTTTAAGGTCACCTACAGGCCTCTTTTAGCGGATATTGTCCAACCAGGAGACGTAAAGGAACTTTGCAAGCTTTTGGTGGTTGTATCTGGAAATGCTGCAAAGGCATACGCTGGTAAGAAATCCCAGGATAAGGTGGTAGAGAAGGAAGATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAAGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTATCTTAGTGTCTACATTGTTTGTTCCTTTAAAAAA]

[+] EMBL AK122112             [AAGCTGCAGCAAGAGGGAAAATCCACTAATCCCCAACTCGGAGACTCCTCCTCTCTGAAATCCGCCATTCCCTACCCCTCCGCCGCAAACACGCGCGCGTGGGGAGCTCGCGGCGAATCCAGCCTCGCCAGCCCCGGCCGCGCGGGGACGCCTTGCCCCCGATCTGGCGACGGCGGCCGCGATCTCGCCGCGCGCCTCGGCGGCTGCGGCGAATTGGGGGTGGGGGTGGGGTGGAGTGGAGTTTCGATAGGTGTGGCGGGGAGGGAGGGAGGGAGAAGGGGCGGCGTGTTGATCTGGTAGCTTCGTGGGGGTTGGGTGGATTAGATAGATGGCGGGGAAGGAGCAACAGGGGGGAGGAGGGCCGCCGCCGCCGCCGCGGGCGCCGGTGCCCGCGGCGTCGTCGCAGCCGCCGATTAAGAAGCTGGTGAGGCAGCTCGACTTCACCTCGGCGGCGTTGGCGGGTAACCCCGCGATGGCGGCGGCCGCGGCCGCCGTGTCCAGGGCGCTGCAGCCGAGGGCGGTCCCGGTGGGGTTCCCGCAGCCGCAGCAACTTAGGGCGCACCTGCCGGTGGGGGTGCCGCAGCAGCTGCATCCCCGGGGCCTGCCGGTGATGCGGTCGCACCACGTGGTGCATGTGCCGCTGCCGCGGCCGGCGGTGGCCGTGGCGGTGCCCGTGCCACAGGTTCGGCCGGCGCAGCCGCAGCCAGTGCCGCGGCCACCGGTCGCCGTTCCATTGAAACCAGAGTCACCAAAGCCACCACGGGCACGGCTTTATGAAGGGAAAGATGGCACCCCGACAAAGAAGAAGTGCTGCAACTGCAAGCACTCCAAATGTTTGAAGTTGTATTGTGAATGCTTTGCATCGGGTGTTTACTGTGATGGATGCAACTGTTCCAACTGTTTTAATAATGTTAAGAACGAGACTGCTAGGCGTGAAGCTATTGATGCTACATTGGAGCGCAACCCTGATGCATTCAGGCCTAAGATTGGGAGTAGCCCGCATGCTAACCGGAATAATATGGAGGCGGCTGGTGATCTTCCATTAGTTGGGAAGCATAATAAAGGGTGCCACTGCAAGAAGTCAGGTTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCTAACATACTTTGCTCTGAAAATTGCAAGTGTATGGATTGCAAGAATTTCGAAGGGAGTGAAGAAAGAAAAGCTCTTTTCCAAGGGGATCATAAAAATTCCATTCACATGCAGCAAGCAGCAAATGCAGCAGTAAATGGTGCTATTGGAGCAGCAGCCTTTTCTTCTCCTTCCGCATCCAGGAAGAGAAAGCACATAGATCCTTCCCTTGACCACTCGGCCAAGGAAAATGGAGCTCACAGGACTAATCATGTACCTCAGAAGAATGGAATGCCATCCGATGGCCCGCTTCCAATAAACCAGCCTGTGCATCCTCCAACATTGGGGCCCTTTAAGGTCACCTACAGGCCTCTTTTAGCGGATATTGTCCAACCAGGAGACGTAAAGGAACTTTGCAAGCTTTTGGTGGTTGTATCTGGAAATGCTGCAAAGGCATACGCTGGTAAGAAATCCCAGGATAAGGTGGTAGAGAAGGAAGATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAAGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGT                                                                  ]
[+] EMBL CB626016             [                                                                                                                                                                                                                                                                                                                                                                         CCGCCGCCGCCGCCGCGGGCGCCGGTGCCCGCGGCGTCGTCGCAGCCGCCGATTAAGAAGCTGGTGAGGCAGCTCGACTTCACCTCGGCGGCGTTGGCGGGTAACCCCGCGATGGCGGCGGCCGCGGCCGCCGTGTCCAGGGCGCTGCAGCCGAGGGCGGTCCCGGTGGGGTTCCCGCAGCCGCAGCAACTTAGGGCGCACCTGCCGGTGGGGGTGCCGCAGCAGCTGCATCCCCGGGGCCTGCCGGTGATGCGGTCGCACCACGTGGTGCATGTGCCGCTGCCGCGGCCGGCGGTGGCCGTGGCGGTGCCCGTGCCACAGGTTCGGCCGGCGCAGCCGCAGCCAGTGCCGCGGCCACCGGTCGCCGTTCCATTGAAACCAGAGTCACCAAAGCCACCACGGGCACGGCTTTATGAAGGGAAAGATGGCACCCCGACAAAGAAGAAGTGCTGCAACTGCAAGCACTCCAAATGTTTGAAGTTGTATTGTGAATGCTTTGCATCGGGTGTTTACTGTGATGGATGCAACTGTTCCAACTGTTTTAATAATGTTAAGAACGAGACTGCTAGGCGTGAAGCTATTGATGCTACATTGGAGCGCAACCCTGATGCATTCAGGCCTAAGATTGGGAGTAGCCCGCATGCTAACCGGAATAATATGGAGGCGGCTGGTGATCTTCCATTAGTTGGGAAGCATAATAAAGGGTGCCACTGCAAGAAGTCACGTTGTCTCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB626017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CCAGGATAAGGTGGTAGAGAAGGAAGATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAAGAAAACAATAAAGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTTAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTATC                                ]
[+] EMBL CF313722             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGACAAACCATGACAGAGAAGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF313723             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTATCTTAGTGTCTACATTGTTTGTTCCTTTAAAAAA]
[-] EMBL BI305628             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CCATAAGCTTGTGACATTCGGAAGAATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATTTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATCCCTTATTTAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGTTAG                                                               ]


>consensus_11322#0 AAGCTGCAGCAAGAGGGAAAATCCACTAATCCCCAACTCGGAGACTCCTCCTCTCTGAAA TCCGCCATTCCCTACCCCTCCGCCGCAAACACGCGCGCGTGGGGAGCTCGCGGCGAATCC AGCCTCGCCAGCCCCGGCCGCGCGGGGACGCCTTGCCCCCGATCTGGCGACGGCGGCCGC GATCTCGCCGCGCGCCTCGGCGGCTGCGGCGAATTGGGGGTGGGGGTGGGGTGGAGTGGA GTTTCGATAGGTGTGGCGGGGAGGGAGGGAGGGAGAAGGGGCGGCGTGTTGATCTGGTAG CTTCGTGGGGGTTGGGTGGATTAGATAGATGGCGGGGAAGGAGCAACAGGGGGGAGGAGG GCCGCCGCCGCCGCCGCGGGCGCCGGTGCCCGCGGCGTCGTCGCAGCCGCCGATTAAGAA GCTGGTGAGGCAGCTCGACTTCACCTCGGCGGCGTTGGCGGGTAACCCCGCGATGGCGGC GGCCGCGGCCGCCGTGTCCAGGGCGCTGCAGCCGAGGGCGGTCCCGGTGGGGTTCCCGCA GCCGCAGCAACTTAGGGCGCACCTGCCGGTGGGGGTGCCGCAGCAGCTGCATCCCCGGGG CCTGCCGGTGATGCGGTCGCACCACGTGGTGCATGTGCCGCTGCCGCGGCCGGCGGTGGC CGTGGCGGTGCCCGTGCCACAGGTTCGGCCGGCGCAGCCGCAGCCAGTGCCGCGGCCACC GGTCGCCGTTCCATTGAAACCAGAGTCACCAAAGCCACCACGGGCACGGCTTTATGAAGG GAAAGATGGCACCCCGACAAAGAAGAAGTGCTGCAACTGCAAGCACTCCAAATGTTTGAA GTTGTATTGTGAATGCTTTGCATCGGGTGTTTACTGTGATGGATGCAACTGTTCCAACTG TTTTAATAATGTTAAGAACGAGACTGCTAGGCGTGAAGCTATTGATGCTACATTGGAGCG CAACCCTGATGCATTCAGGCCTAAGATTGGGAGTAGCCCGCATGCTAACCGGAATAATAT GGAGGCGGCTGGTGATCTTCCATTAGTTGGGAAGCATAATAAAGGGTGCCACTGCAAGAA GTCAGGTTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCTAACATACTTTGCTCTGAAAA TTGCAAGTGTATGGATTGCAAGAATTTCGAAGGGAGTGAAGAAAGAAAAGCTCTTTTCCA AGGGGATCATAAAAATTCCATTCACATGCAGCAAGCAGCAAATGCAGCAGTAAATGGTGC TATTGGAGCAGCAGCCTTTTCTTCTCCTTCCGCATCCAGGAAGAGAAAGCACATAGATCC TTCCCTTGACCACTCGGCCAAGGAAAATGGAGCTCACAGGACTAATCATGTACCTCAGAA GAATGGAATGCCATCCGATGGCCCGCTTCCAATAAACCAGCCTGTGCATCCTCCAACATT GGGGCCCTTTAAGGTCACCTACAGGCCTCTTTTAGCGGATATTGTCCAACCAGGAGACGT AAAGGAACTTTGCAAGCTTTTGGTGGTTGTATCTGGAAATGCTGCAAAGGCATACGCTGG TAAGAAATCCCAGGATAAGGTGGTAGAGAAGGAAGATGAGATGGGAGGGAAGAGGGAAGG TGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAAGAAAACAATAATGATCC AAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGC TTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTC TCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAA TGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACA AGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAG AATGAAAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCA GGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAAC ATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGA CAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGT CAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATT CTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTT GGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTATCTTAGTGTCTACATTGTTTG TTCCTTTAAAAAA



consensusID : consensus_11322#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 897
fasta sequence
                              [GATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAGGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGGTACATCGAAATTTCCCATGTGTCATGCTAATACAGAATTATTGAACTTCT-CCATTTTTTGCTTTGTAAAACGTGTACAGTTTGATCCTGATGGTTCTTCCTTGCAAGGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAGTAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTAAAAAA]

[+] EMBL CF328826             [GATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAGGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGGTACATCGAAATTTCCCATGTGTCATGCTAATACAGAATTATTGAACTTCT CCATTTTTTGCTTTGTAAAACGTGTACAGTTTGATCCTGATGGTTCTTCCTTGCAAGGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCA                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CF328827             [                                                                                                                                                                                                                                                                                                                                                     TACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAGAATGAAAGGTACATCGAAATTTCCCATGTGTCATGCTAATACAGAATTATTGAACTTCTCCCATTTTTTGCTTTGTAAAACGTGTACAGTTTGATCCTGATGGTTCTTCCTTGCAGAGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAGTAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTAAAAAA]


>consensus_11322#1 GATGAGATGGGAGGGAAGAGGGAAGGTGAGATTGGAGGTTCCCTAGCATCGACAAACCAT GACAGAGAGGAAAACAATAATGATCCAAATAATCAAAAGGCATCAGCTGATGACCCATCA ACTGGAGGAACTCGTGCAGGCAAAGCTTCTCTAGAAGAGTCTAAACATGATTGCAATGAT GATCAGAAATCCAATAGGCCAATGTCTCCAGGAACACTAGCATTGATGTGTGATGAACAA GACACGATGTTTATGACTTCCCAAAATGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAG AACCAGTCTGAATTGTATGCAGAACAAGAAAGGTGTGTGCTTACAGAATTCCGTGATTGT CTCCATAAGCTTGTGACATTCGGAAGAATGAAAGGTACATCGAAATTTCCCATGTGTCAT GCTAATACAGAATTATTGAACTTCTCCATTTTTTGCTTTGTAAAACGTGTACAGTTTGAT CCTGATGGTTCTTCCTTGCAAGGGAGAAGTTTTCCATGGCAATCAAATCTGAAGTGCCTG CCCATCCCATGCAGGCGAATGGTGTTTCACGAATACCTTATTCAAAAGAAGTAGATGTAC CTGTTGTAAAAACATTTCTACAGAGTTCCAGTAGACATCCTGCTGCTGGAAACTCCGCAA CTGGGCATTTGGACAAAAAACCCAAGCATGAAAATACATAGGTGTCCGGGGTTTGTATTT TGGGTAGCATGGTCAAGAGAATCATGTTTTCTCCCTCTAACATGTTGATCAGAAGCTTGT ATCAGTCTTCATTCTTGTCTTAGGTTCAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAG TAAGTGTAATGTTGGATAGTTAGCTTAGTCATAAATATGCATTTAGCCTTTAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11322#0      AAGCTGCAGCAAGAGGGAAAATCCACTAATCCCCAACTCGGAGACTCCTCCTCTCTGAAA 60
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TCCGCCATTCCCTACCCCTCCGCCGCAAACACGCGCGCGTGGGGAGCTCGCGGCGAATCC 120
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      AGCCTCGCCAGCCCCGGCCGCGCGGGGACGCCTTGCCCCCGATCTGGCGACGGCGGCCGC 180
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GATCTCGCCGCGCGCCTCGGCGGCTGCGGCGAATTGGGGGTGGGGGTGGGGTGGAGTGGA 240
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GTTTCGATAGGTGTGGCGGGGAGGGAGGGAGGGAGAAGGGGCGGCGTGTTGATCTGGTAG 300
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      CTTCGTGGGGGTTGGGTGGATTAGATAGATGGCGGGGAAGGAGCAACAGGGGGGAGGAGG 360
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GCCGCCGCCGCCGCCGCGGGCGCCGGTGCCCGCGGCGTCGTCGCAGCCGCCGATTAAGAA 420
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GCTGGTGAGGCAGCTCGACTTCACCTCGGCGGCGTTGGCGGGTAACCCCGCGATGGCGGC 480
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GGCCGCGGCCGCCGTGTCCAGGGCGCTGCAGCCGAGGGCGGTCCCGGTGGGGTTCCCGCA 540
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GCCGCAGCAACTTAGGGCGCACCTGCCGGTGGGGGTGCCGCAGCAGCTGCATCCCCGGGG 600
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      CCTGCCGGTGATGCGGTCGCACCACGTGGTGCATGTGCCGCTGCCGCGGCCGGCGGTGGC 660
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      CGTGGCGGTGCCCGTGCCACAGGTTCGGCCGGCGCAGCCGCAGCCAGTGCCGCGGCCACC 720
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GGTCGCCGTTCCATTGAAACCAGAGTCACCAAAGCCACCACGGGCACGGCTTTATGAAGG 780
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GAAAGATGGCACCCCGACAAAGAAGAAGTGCTGCAACTGCAAGCACTCCAAATGTTTGAA 840
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GTTGTATTGTGAATGCTTTGCATCGGGTGTTTACTGTGATGGATGCAACTGTTCCAACTG 900
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TTTTAATAATGTTAAGAACGAGACTGCTAGGCGTGAAGCTATTGATGCTACATTGGAGCG 960
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      CAACCCTGATGCATTCAGGCCTAAGATTGGGAGTAGCCCGCATGCTAACCGGAATAATAT 1020
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GGAGGCGGCTGGTGATCTTCCATTAGTTGGGAAGCATAATAAAGGGTGCCACTGCAAGAA 1080
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GTCAGGTTGTCTCAAGAAGTACTGTGAGTGCTTCCAAGCTAACATACTTTGCTCTGAAAA 1140
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TTGCAAGTGTATGGATTGCAAGAATTTCGAAGGGAGTGAAGAAAGAAAAGCTCTTTTCCA 1200
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      AGGGGATCATAAAAATTCCATTCACATGCAGCAAGCAGCAAATGCAGCAGTAAATGGTGC 1260
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TATTGGAGCAGCAGCCTTTTCTTCTCCTTCCGCATCCAGGAAGAGAAAGCACATAGATCC 1320
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TTCCCTTGACCACTCGGCCAAGGAAAATGGAGCTCACAGGACTAATCATGTACCTCAGAA 1380
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GAATGGAATGCCATCCGATGGCCCGCTTCCAATAAACCAGCCTGTGCATCCTCCAACATT 1440
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      GGGGCCCTTTAAGGTCACCTACAGGCCTCTTTTAGCGGATATTGTCCAACCAGGAGACGT 1500
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      AAAGGAACTTTGCAAGCTTTTGGTGGTTGTATCTGGAAATGCTGCAAAGGCATACGCTGG 1560
consensus_11322#1      ------------------------------------------------------------
                                                                                   

consensus_11322#0      TAAGAAATCCCAGGATAAGGTGGTAGAGAAGGAAGATGAGATGGGAGGGAAGAGGGAAGG 1620
consensus_11322#1      ----------------------------------GATGAGATGGGAGGGAAGAGGGAAGG 26
                                                         **************************

consensus_11322#0      TGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAAGAAAACAATAATGATCC 1680
consensus_11322#1      TGAGATTGGAGGTTCCCTAGCATCGACAAACCATGACAGAGAGGAAAACAATAATGATCC 86
                       ****************************************** *****************

consensus_11322#0      AAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGC 1740
consensus_11322#1      AAATAATCAAAAGGCATCAGCTGATGACCCATCAACTGGAGGAACTCGTGCAGGCAAAGC 146
                       ************************************************************

consensus_11322#0      TTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTC 1800
consensus_11322#1      TTCTCTAGAAGAGTCTAAACATGATTGCAATGATGATCAGAAATCCAATAGGCCAATGTC 206
                       ************************************************************

consensus_11322#0      TCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAA 1860
consensus_11322#1      TCCAGGAACACTAGCATTGATGTGTGATGAACAAGACACGATGTTTATGACTTCCCAAAA 266
                       ************************************************************

consensus_11322#0      TGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACA 1920
consensus_11322#1      TGTAGTTCCGCAGCAGCCAGCACCTGTCAACCAGAACCAGTCTGAATTGTATGCAGAACA 326
                       ************************************************************

consensus_11322#0      AGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAG 1980
consensus_11322#1      AGAAAGGTGTGTGCTTACAGAATTCCGTGATTGTCTCCATAAGCTTGTGACATTCGGAAG 386
                       ************************************************************

consensus_11322#0      AATGAAAGA--------------------------------------------------- 1989
consensus_11322#1      AATGAAAGGTACATCGAAATTTCCCATGTGTCATGCTAATACAGAATTATTGAACTTCTC 446
                       ********                                                    

consensus_11322#0      --------------------------------------------------------GGAG 1993
consensus_11322#1      CATTTTTTGCTTTGTAAAACGTGTACAGTTTGATCCTGATGGTTCTTCCTTGCAAGGGAG 506
                                                                               ****

consensus_11322#0      AAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTT 2053
consensus_11322#1      AAGTTTTCCATGGCAATCAAATCTGAAGTGCCTGCCCATCCCATGCAGGCGAATGGTGTT 566
                       ************************************************************

consensus_11322#0      TCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGT 2113
consensus_11322#1      TCACGAATACCTTATTCAAAAGAAGTAGATGTACCTGTTGTAAAAACATTTCTACAGAGT 626
                       ************************************************************

consensus_11322#0      TCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAG 2173
consensus_11322#1      TCCAGTAGACATCCTGCTGCTGGAAACTCCGCAACTGGGCATTTGGACAAAAAACCCAAG 686
                       ************************************************************

consensus_11322#0      CATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATG 2233
consensus_11322#1      CATGAAAATACATAGGTGTCCGGGGTTTGTATTTTGGGTAGCATGGTCAAGAGAATCATG 746
                       ************************************************************

consensus_11322#0      TTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTT 2293
consensus_11322#1      TTTTCTCCCTCTAACATGTTGATCAGAAGCTTGTATCAGTCTTCATTCTTGTCTTAGGTT 806
                       ************************************************************

consensus_11322#0      CAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAATAAGTGTAATGTTGGATAGTTAGCTT 2353
consensus_11322#1      CAAGAAAGCTCCAATTTGTTCTCATTGGTAAAAGTAAGTGTAATGTTGGATAGTTAGCTT 866
                       ********************************* **************************

consensus_11322#0      AGTCATAAATATGCATTTAGCCTTTATCTTAGTGTCTACATTGTTTGTTCCTTTAAAAAA 2413
consensus_11322#1      AGTCATAAATATGCATTTAGCCTTTAAAAAA----------------------------- 897
                       **************************    *                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)