|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11323#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1468 fasta sequence
[CTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCATTCGTCACGTACCATGTCCTTTGACTGAATGGGCATATCATTGTGCTTTCCATGTGTATAATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTATTTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATCATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAACTATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATTGGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTCTACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGATCATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATGGCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTTCATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAAAGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTTGAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAGCCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGGACATTAATGTTTAGAGCACTTTCATAGTGGTCTCTACTGGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACAACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACCACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGGTCTAGATCAG]
[+] EMBL AK122064 [CTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCATTCGTCACGTACCATGTCCTTTGACTGAATGGGCATATCATTGTGCTTTCCATGTGTATAATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTATTTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATCATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAACTATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATTGGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTCTACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGATCATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATGGCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTTCATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAAAGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTTGAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAGCCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGGACATTAATGTTTAGAGCACTTTCATAGTGGTCTCTACTGGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACAACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACCACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGGTCTAGATCAG]
consensusID : consensus_11323#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1268 fasta sequence
[GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA]
[+] EMBL AK102900 [GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCTATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAAC ]
[+] EMBL AK073252 [ GCTCCTTTCCCACCCACCCGTGAGATGGCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCGTACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA]
[+] EMBL C28087 [ GCTTGTNAGACCAGGACGGCCGGCAGAGGTGGCGCCANTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTNTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAG CAANTATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGNTTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC ACTGCTGANG AGGATCAATAATAGNGGCTct ]
[+] EMBL AU092830 [ GAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTNTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTNCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAAaaaaa ]
[+] EMBL OSC24031 [ TGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTT ]
consensusID : consensus_11323#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1252 fasta sequence
[AAAAAAAAAAAAAAAAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGTCTTTGCCTGCCTATGATTTTT]
[+] EMBL AK105427 [AAAAAAAAAAAAAAAAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCCGACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCCGCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGATCAAGCTCGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCACATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGTCATCTCCAAGAACCTAGAGGACATTCTCATGAGCTCAGGGATGCTAAATTTGAAGGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGATGTCTATTGTTTGAATGCTGATGGGTCTCTATTCGACGCTGCACTAATCTCAGCTGTTGCTGCATTTACACATTTGGAAATTCCTTTGGTATCTGTCGGTGATGATGGTAGAGTATTTACTGTTGGGGGCAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGGAAGCTTACGATTACTAATGTTCCATTTTCCCTTACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCCAACTGCTGAAGAAGAATCAATAATAGAGACTTCTGTGACTATTGTTCTCGATTCTTCAGACCAGATAGTGTCAATACAAAAACCTGGAGGTGCAGTGACATCTATGACAACTATTAAGGAATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGAGAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTGTCACAGTTCTGATTCAGTGAATCTAACCAAATTATTTTTGTAGTAGCTCTTTCCTATCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAATTAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGTATCATAATTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCTATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGTCTTTGCCTGCCTATGATTTTT]
consensusID : consensus_11323#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 667 fasta sequence
[TTTTTTTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCCTCATACTATGAATACAAAGAAGACATAAGACAGACTCAAATAAAATTATGATACCACTTTAATTCAATAAAATCATAGGCAGGTACGGACTGTTACTTATTTAATTAAACGGATAGTAGCCAAAGGGGCTAAAATTTATCACGCTACGAGTACAACCAAGAGATAGGAAAGAGCTACTACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGGCGACTTCCATTGCTTCAACATTGGCCATGAGAATTTCTCTTAACTTTCTTCTCCTGTCCTTAGCCAAGCTAATGCATTCCTTAATAGTTGTCATAGATGTCACTGCACCTCCAGGTTTTTGTATTGACACTATCTGGTCTGAAGAATCGAGAACAATAGTCACCAGAAGTCTCTATTATTGATTCTTCTTCAGCAGTTGGATCCGCTAGAACATTATCCTTGCGAAGTGCACATGTAAGGGAAAATGGAACATTAGTAATCGGAAGCTTCCTCTTTTCTCTGTTTACCAATTAATATTTTGGCTTTGCCTTCATTGGCCCCAACAGGAAATACCTCTACCATCATGCACCGGCTGGAACCCAAGGAATTTGCCAAGGGGGTAAATGGG]
[+] EMBL CA762086 [TTTTTTTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCCTCATACTATGAATACAAAGAAGACATAAGACAGACTCAAATAAAATTATGATACCACTTTAATTCAATAAAATCATAGGCAGGTACGGACTGTTACTTATTTAATTAAACGGATAGTAGCCAAAGGGGCTAAAATTTATCACGCTACGAGTACAACCAAGAGATAGGAAAGAGCTACTACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGGCGACTTCCATTGCTTCAACATTGGCCATGAGAATTTCTCTTAACTTTCTTCTCCTGTCCTTAGCCAAGCTAATGCATTCCTTAATAGTTGTCATAGATGTCACTGCACCTCCAGGTTTTTGTATTGACACTATCTGGTCTGAAGAATCGAGAACAATAGTCACCAGAAGTCTCTATTATTGATTCTTCTTCAGCAGTTGGATCCGCTAGAACATTATCCTTGCGAAGTGCACATGTAAGGGAAAATGGAACATTAGTAATCGGAAGCTTCCTCTTTTCTCTGTTTACCAATTAATATTTTGGCTTTGCCTTCATTGGCCCCAACAGGAAATACCTCTACCATCATGCACCGGCTGGAACCCAAGGAATTTGCCAAGGGGGTAAATGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11323#1 GAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTCCTTTCCCACCCACCCGTGAGATG 60
consensus_11323#2 ----------------------------------------------AAAAAAAAAAAAAA 14
consensus_11323#0 -------------------------------------CTTTCCCACCCACCCGTGAGATG 23
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 GCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCG 120
consensus_11323#2 AAAAAAAAAAAATAAACCAAAAAGAAAACCCCCTTTGTCGACAAAGCCAGTCCCAAGCTC 74
consensus_11323#0 GCGGCGGAGGCCCAAGCCACGGCGGCCGGCGGCCTCGCCGGCGAGATGGAGGTGGAGGCG 83
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 TACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 180
consensus_11323#2 CTTTCCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 134
consensus_11323#0 TACCGCCGCCTCTTCCCCCTCGCCTTCCTCGAGCGCCACCTCCGCGAATCCGTCCGCCCC 143
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 240
consensus_11323#2 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 194
consensus_11323#0 GACGCGCGCCGCCCCGCCGAGGCCCGCCCAACCACCGTCGCCCTCGCCGCCGTGTCCTCC 203
consensus_11323#3 -------------------------------------------------------TTTTT 5
*
consensus_11323#1 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 299
consensus_11323#2 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 253
consensus_11323#0 GCCCACGGCTCCGCCCTCGTCCGCCTCGGCGACACCGCCATGCTCGCGTCGAT-CAAGCT 262
consensus_11323#3 TTTTTTAAATCGAAGGTAGATAGACGCTAAAATTCC-TCATACT---ATGAATACAAAGA 61
** * * * * * * ** *** ** * ** ***
consensus_11323#1 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 359
consensus_11323#2 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 313
consensus_11323#0 CGAGGTGATGTCGCCCTCCGGTGAGGCCCCCGACGAAGGATCTATTGCTGTGGAGTTCCA 322
consensus_11323#3 AGACATAA-GACAGACTCAAATAAAATTAT-GAT-ACCACTTTAATTCAATAAAATCATA 118
** * * * * *** * * ** * * ** * * * * * *
consensus_11323#1 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 419
consensus_11323#2 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 373
consensus_11323#0 CATGCCGCCTATCTGTTCCCCGCTTGTCAGACCAGGACGGCCGGCAGAGGTGGCGCCAGT 382
consensus_11323#3 GGCAGGTACGGACTGTTACTTATTTAATTAAAC-GGATAGTAGCCAAAGGGGCTAAAATT 177
* ***** * ** * * *** * * ** *** * * *
consensus_11323#1 CATCTCCAAGAACCTAGAGGACATTCTCATGAG-----------CTCAGGGATGCTAAAT 468
consensus_11323#2 CATCTCCAAGAACCTAGAGGACATTCTCATGAG-----------CTCAGGGATGCTAAAT 422
consensus_11323#0 CATCTCCAAGAACCTAGAGGACATTCTCATGAGGTATATCGTGCCTTGCTGTTGCTCCAT 442
consensus_11323#3 TATCAC-----GCTACGAGTACAAC--CAAGAG-----------ATAGGAAAGAGCTACT 219
*** * * *** *** ** *** * *
consensus_11323#1 TTGA-AGGAGCTCTGTTTGATC-AGTGGGAAGGCATCT-----TGGTTAGCATACCTGGA 521
consensus_11323#2 TTGA-AGGAGCTCTGTTTGATC-AGTGGGAAGGCATCT-----TGGTTAGCATACCTGGA 475
consensus_11323#0 TCGTCACGTACCATGTCCTTTG-ACTGAATGGGCATATCATTGTGCTTTCCATGTGTATA 501
consensus_11323#3 ACAAAAATAATTTGGTTAGATCCACTGAATCAGAACTGGGACAAACTTAATCAGTTTGGG 279
* ** * * ** * * ** *
consensus_11323#1 ---TGTCTATTGTTTGAATG--CTGATGGGTCTCT----------ATTCGACG------- 559
consensus_11323#2 ---TGTCTATTGTTTGAATG--CTGATGGGTCTCT----------ATTCGACG------- 513
consensus_11323#0 ATCTGCATTTTGCTTGAATGGATGAATGCCTGTCTGCAGGAGTGAATTTAATTTATTTAT 561
consensus_11323#3 CGACTTCCATTGCTTCAACA---------TTGGCC----------ATGAGAAT------- 313
*** ** ** * * ** *
consensus_11323#1 ---CTGCACTAATCTCAGCTG--TTGCTGCATTTACACATTTGGA--------------- 599
consensus_11323#2 ---CTGCACTAATCTCAGCTG--TTGCTGCATTTACACATTTGGA--------------- 553
consensus_11323#0 TTTCTGCAGTAAATCATGCTGATTTGCTATATTGTAGCAATTGGACTTTAGAGTTTAATC 621
consensus_11323#3 ----TTCTCTTAACTTTCTTC---TCCTGTCCTTAGCCAAGCTAAT-------------- 352
* * * * * * ** * ** *
consensus_11323#1 ----AATTCCTTTGGTATCTGTCG-GTGATGATGGTAGA--GTATT--TACTGTTGGGGG 650
consensus_11323#2 ----AATTCCTTTGGTATCTGTCG-GTGATGATGGTAGA--GTATT--TACTGTTGGGGG 604
consensus_11323#0 ATGGGGTTCCTTTTTAATCAGCAAAGTAGTCATGTGAAACTGCATTAGCACAAATGGAAC 681
consensus_11323#3 --------------GCATTCCTTA-ATAGTTGTCATAGA---TGTCACTGCACCTCCAGG 394
** * * * * * * * *
consensus_11323#1 CAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGG--AAGCTTACGATT 708
consensus_11323#2 CAATGAAGGCAAAGCCAAATATGAATTGGTAAACAGAGAAAAGAGG--AAGCTTACGATT 662
consensus_11323#0 TATTGAAGAGTATTTTGTTGATTCGCTTTTAGCTAGCCAATATGATCTATATGTAGGATT 741
consensus_11323#3 TTTTTGTATTGACACTA--TCTGGTCTGAAGAATCGAGAACAATAG---TCACCAGAAGT 449
* * * * * ** * * * *
consensus_11323#1 ACTAATGTTCCATTTTCCCTT-ACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC 767
consensus_11323#2 ACTAATGTTCCATTTTCCCTT-ACATGTGCACTTCACAAGGATAATGTTCTAGCGGATCC 721
consensus_11323#0 GGGCATGATAAAATGGCAGTTCGTTTGCATACTGTACAGTGGGGCTGGTTCATCTTGTTC 801
consensus_11323#3 CTCTATTATTGATTCTTCTTCAGCAGTTGGA-TCCGCTAGAACATTATCCTTGCGAAGTG 508
** * * * * * * * * *
consensus_11323#1 AACT-GCTGAAGAAGAATCAATAATAGAGACTTC-------TGTGACTATTGTTCTCGAT 819
consensus_11323#2 AACT-GCTGAAGAAGAATCAATAATAGAGACTTC-------TGTGACTATTGTTCTCGAT 773
consensus_11323#0 TACTTGTTAGTAGAAAACCAGAAATGGGGAATTTAATTTTGTGGAATCAGTCTTGTTGAT 861
consensus_11323#3 CACATGTAAGGGAAAATGGAACATTAGTAATCGGA------AGCTTCCTCTTTTCTCTGT 562
** * * * * * * * * * * ** * *
consensus_11323#1 TCTTCAGACCAGATAGTGT-CAATACA-----AAAACCTGGAGGTGCAGTGACATCTATG 873
consensus_11323#2 TCTTCAGACCAGATAGTGT-CAATACA-----AAAACCTGGAGGTGCAGTGACATCTATG 827
consensus_11323#0 CATATGACTTATCTATTTTTCTGTATGCCCGTGAAACTTCTATATCCGTTTGCATACATG 921
consensus_11323#3 TTACCAATTAATATTTTGG-CTTTGCCTTCA-TTGGCCCCAACAGGAAATACCTCTACCA 620
* * * * * * * * *
consensus_11323#1 ACAACTATTAAGGA------ATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGA 927
consensus_11323#2 ACAACTATTAAGGA------ATGCATTAGCTTGGCTAAGGACAGGAGAAGAAAGTTAAGA 881
consensus_11323#0 GCATATACAGAGGTGGCTTTATTTAATCCTCTCGTGCAGCTCAGGGATGCTAAATTTGAA 981
consensus_11323#3 TCATGCACCGGCTGGA----ACCCAAGGAATTTGCCAAGGGGGTAAATGGG--------- 667
** * * * * * **
consensus_11323#1 GAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTG-TCA 986
consensus_11323#2 GAAATTCTCATGGACAATGTTGAAGCAATGGAAGTCGACCAAACTGATTAAGTTTG-TCA 940
consensus_11323#0 GGAGCTCTGTTTGATCAGTGGGAAGGCATCTTGGTTAGCATACCTGGTAATCACTGATTT 1041
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 CAGTTCTGATTCAGTGAATCTAACCAAATTATT-----TTTGTAGTAGCTCT--TTCCTA 1039
consensus_11323#2 CAGTTCTGATTCAGTGAATCTAACCAAATTATT-----TTTGTAGTAGCTCT--TTCCTA 993
consensus_11323#0 CATTATTGGTTCCTTCTCTTTGTAAGGCTTACTGGGCATCTCCAATAAGTCAAATTGAAA 1101
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 TCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAAT 1099
consensus_11323#2 TCTCTTGGTTGTACTCGTAGCGTGATAAATTTTAGCACCTTTGGCTACTATCCGTTTAAT 1053
consensus_11323#0 AGCTTCACCTGAAATCTAGTCGTGATACATTAAATAAGATGCGCAAGGCTTCTCATCCTT 1161
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 TAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGT--ATCATAA 1157
consensus_11323#2 TAAATAAGTAACAGTCCGTACCTGCCTATGATTTTATTGAATTAAAGTGGT--ATCATAA 1111
consensus_11323#0 GAAGCCTGGTCCAAGCATCAATTGCTTGCTGCTTGCCTAATGTCAAGTAGTCAGCAATAG 1221
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 TTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCT 1217
consensus_11323#2 TTTTATTTGAGTCTGTCTTATGTCTTCTTTGTATTCGTAGTATGAGGAATTTTAGCGTCT 1171
consensus_11323#0 CCTTCCTCAAGGGATGATAGTTATTTTGTCATGATTGTGG-ACATTAATGTTTAGAGCAC 1280
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 ATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTA--------- 1268
consensus_11323#2 ATCTACCTTCGGCTTACCTTCTGTGTTTAGTTACACACAACAATACAAGTATGTAACAGT 1231
consensus_11323#0 TTTCATAGTGGTCTCTACT--GGAATTTATCTACTTCCAGTAATACTACCAGTAGAAACA 1338
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 ------------------------------------------------------------
consensus_11323#2 CTTTGCCTGCCTATGATTTTT--------------------------------------- 1252
consensus_11323#0 ACCTAACTCACAGCTTTATAAGGATCTTCATTGGACAATTATACCCCCATTGGTTGTACC 1398
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 ------------------------------------------------------------
consensus_11323#2 ------------------------------------------------------------
consensus_11323#0 ACTGGTATTGAGTCAGTACTATAAACAAATATGGTCCGTTTAATGAAAAAAGCCAGAAGG 1458
consensus_11323#3 ------------------------------------------------------------
consensus_11323#1 ----------
consensus_11323#2 ----------
consensus_11323#0 TCTAGATCAG 1468
consensus_11323#3 ----------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||