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Oryza sativa
cluster # 11334 cluster # 11334       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11334#0 length = 2113 sequences # 7  
consensus_11334#1 length = 328 sequences # 1  

consensusID : consensus_11334#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2113
fasta sequence
                              [TGGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCGCCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCAGTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGGGGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGGGTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGACGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTCCGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAAGTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTGCCTGCACTACACGCGGCTGGTGGACGGCTATTGGTCGCCGGCGACGGAGATGTCGACCTACCTGCGGGTGGTGGAGTCGAACAACGACCCGAACAACTTCACGGGGATGACGACGATGATCGACACGGTGTGCCCGGTGCGGCTGGCGCTGCCGGTGCCGCCGAAGCAGGGGCGGACGACGATCCGGAACATCGCCATCATCACGGCGCTGTTCGCGGTGGAGCTGCTGGCGGGGGTGCTGTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGGGCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGCGACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGAGCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGCGGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGATGTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGTACGAGTATGTGCCAAACGGATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAGCAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCGCGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACATGGCCCC-CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCGCGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTGGGCTCACGACAGCAACTGAGCAAGGCAAATGTACATGATGAGTGGATTACGCTTCAAAATGATACGCACCATCAAATTCGTCGGCATCTCTCTCGTAGGCTCAGCGCAGATATCATGACATATATTTACCTTTTTTTTATTAGTAAATTTCATAAAACTACATATACTTTGACTAAATTATCATAAAACTACAT]

[+] EMBL AK121858             [TGGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCGCCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCAGTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGGGGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGGGTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGACGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTCCGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAAGTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTGCCTGCACTACACGCGGCTGGTGGACGGCTATTGGTCGCCGGCGACGGAGATGTCGACCTACCTGCGGGTGGTGGAGTCGAACAACGACCCGAACAACTTCACGGGGATGACGACGATGATCGACACGGTGTGCCCGGTGCGGCTGGCGCTGCCGGTGCCGCCGAAGCAGGGGCGGACGACGATCCGGAACATCGCCATCATCACGGCGCTGTTCGCGGTGGAGCTGCTGGCGGGGGTGCTGTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGGGCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGCGACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGAGCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGCGGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGATGTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGCACGAGTATGTGCCAAACGGATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAGCAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCGCGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACATGGCCCC CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCGCGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTGGGCTCACGACAGCAACTGAGCAAGGCAAATGTACATGATGAGTGGATTACGCTTCAAAATGATACGCACCATCAAATTCGTCGGCATCTCTCTCGTAGGCTCAGCGCAGATATCATGACATATATTTACCTTTTTTTTATTAGTAAATTTCATAAAACTACATATACTTTGACTAAATTATCATAAAACTACAT]
[+] EMBL CB664508             [TGGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCGCCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCAGTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGGGGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGGGTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGACGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTCCGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAAGTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTGCCTGCACTACACGCGGCTGGTGGACGGCTATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL AK068970             [ GGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCGCCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCAGTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGGGGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGGGTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGACGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTCCGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAAGTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTGCCTGCACTACACGCGGCTGGTGGACGGCTATTGGTCGCCGGCGACGGAGATGTCGACCTACCTGCGGGTGGTGGAGTCGAACAACGACCCGAACAACTTCACGGGGATGACGACGATGATCGACACGGTGTGCCCGGTGCGGCTGGCGCTGCCGGTGCCGCCGAAGCAGGGGCGGACGACGATCCGGAACATCGCCATCATCACGGCGCTGTTCGCGGTGGAGCTGCTGGCGGGGGTGCTGTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGGGCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGCGACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGAGCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGCGGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGATGTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGTACGAGTATGTGCCAAACGGATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAGCAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCGCGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACATGGCCCC CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCGCGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCA                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB652025             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGTTCGCCTTTGAGCGGCTGGCGGGGGTGCTGTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGGGCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGCGACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGAGCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGCGGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGATGTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGTACGAGTATGTGCCAAACGGATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAGCAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCGCGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACATGGCCCC CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CF308479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGGATGCTGGTGTACGAGTATGTGCCAAACGGATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAGGAGAGCAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCGCGCCATCGCGTATCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCTCATCCGTGGCACCCGCGGGTACATGGCCCCNCGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAAGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB664509             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATCAAGCCTGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAAGCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACATGGCCCC CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCGCGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTGGGCTCACGACAGCAACTGAGCAAGGCAAATGTACATGATGAGTGGATTACGCTTCAAAATGATACGCACCATCAAATTCGTCGG                                                                                                              ]
[-] EMBL CF308480             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CCCGCGGGTACATGGCCCC CGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTTCGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTCCGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCGCCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCCCGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCGCGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTGGGCTCACGACAGCAACTGAGCAAGGCAGATGTACATGATGAGTGGATTACGCTTCAAAATGATACGCACCATCAAATTaaaaaaa                                                                                                             ]


>consensus_11334#0 TGGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCG CCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCA GTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGG GGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGG GTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGA CGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTC CGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAA GTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTG CCTGCACTACACGCGGCTGGTGGACGGCTATTGGTCGCCGGCGACGGAGATGTCGACCTA CCTGCGGGTGGTGGAGTCGAACAACGACCCGAACAACTTCACGGGGATGACGACGATGAT CGACACGGTGTGCCCGGTGCGGCTGGCGCTGCCGGTGCCGCCGAAGCAGGGGCGGACGAC GATCCGGAACATCGCCATCATCACGGCGCTGTTCGCGGTGGAGCTGCTGGCGGGGGTGCT GTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGG GCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGC GACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGA GCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGC GGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGAT GTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGTACGAGTATGTGCCAAACGG ATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAG CAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCG CGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCC TGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAA GCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACAT GGCCCCCGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTT CGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTC CGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCG CCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCC CGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCG CGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGAT CACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGT ACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTACT AGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTGG GCTCACGACAGCAACTGAGCAAGGCAAATGTACATGATGAGTGGATTACGCTTCAAAATG ATACGCACCATCAAATTCGTCGGCATCTCTCTCGTAGGCTCAGCGCAGATATCATGACAT ATATTTACCTTTTTTTTATTAGTAAATTTCATAAAACTACATATACTTTGACTAAATTAT CATAAAACTACAT



consensusID : consensus_11334#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 328
fasta sequence
                              [CAGGACCGCAGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGACCCTGCATATCCTGCGTTGTCTGATTTGCCTCTGGGCTCACGACAGCAACTGAGCAAGCAAATGTACATGATGAGTGGATTACGCTTCAAATGATACGCACCATCAATTAAAAAAAA]

[+] EMBL BM418806             [CAGGACCGCAGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAATTATCTTTCTTATTTATTATACTAGTACTAGTTCAGATCAGATCAGAGCAGACCCTGCATATCCTGCGTTGTCTGATTTGCCTCTGGGCTCACGACAGCAACTGAGCAAGCAAATGTACATGATGAGTGGATTACGCTTCAAATGATACGCACCATCAATTAAAAAAAA]


>consensus_11334#1 CAGGACCGCAGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCAC CGTCGAGATCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCT CCTAGGAGTACTCCACTTCTTGCCACGAGAGACACACAATTATCTTTCTTATTTATTATA CTAGTACTAGTTCAGATCAGATCAGAGCAGACCCTGCATATCCTGCGTTGTCTGATTTGC CTCTGGGCTCACGACAGCAACTGAGCAAGCAAATGTACATGATGAGTGGATTACGCTTCA AATGATACGCACCATCAATTAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11334#0      TGGTGGCAATCCCTCCCAGCTCATCGCCTCCGACCAGGGCTCCACTCGCCGCCTGCGCCG 60
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CCTCACCCTCGACGACGACGGCAACCTGCGCCTCTACAGCCTGCAGTCCAAGAAAGGGCA 120
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GTGGCGGGTGGTATGGCAGCTGGTGCAGGAGCTCTGCACCATCCGGGGCGCCTGCCAAGG 180
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GGAGGCCAACATCTGCGTCCCCCAAGGCGCCGACAACACCACCTGCGTCTGCCCGCCGGG 240
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GTACCGCCCGCAGGGCCTGGGCTGCGCCCCCAAGCTTAACTACAGCGGCAAGGGCAACGA 300
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGACAAGTTCGTGCGGATGGATTTCGTTTCCTTCTCCGGTGGCGCCGACACCGGAGTGTC 360
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGTCCCCGGCAAGTACATGACCAGCCTGACGCCGCAGAACCTGGCGGACTGCCAGAGCAA 420
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GTGCCGGGCCAACGCCTCTTGCGTGGCCTTCGGCTACAAGTTGGGCGGGGACCGGACGTG 480
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CCTGCACTACACGCGGCTGGTGGACGGCTATTGGTCGCCGGCGACGGAGATGTCGACCTA 540
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CCTGCGGGTGGTGGAGTCGAACAACGACCCGAACAACTTCACGGGGATGACGACGATGAT 600
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGACACGGTGTGCCCGGTGCGGCTGGCGCTGCCGGTGCCGCCGAAGCAGGGGCGGACGAC 660
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GATCCGGAACATCGCCATCATCACGGCGCTGTTCGCGGTGGAGCTGCTGGCGGGGGTGCT 720
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GTCGTTCTGGGCGTTCCTGCGCAAGTACTCGCAGTACAGGGAGATGGCGCGGACGCTGGG 780
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GCTGGAGTACCTCCCCGCCGGCGGGCCGCGGCGGTTCTCGTACGCGGAGCTGAAGGCGGC 840
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GACCAAGGAGTTCTCGGACTTGGTGGGGCGCGGGGCGTACGGGAAGGTGTACCGCGGGGA 900
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GCTGCCGGACCGGCGGGCGGTGGCAGTGAAGCAGCTGGACGGGGTGGGCGGGGGAGAGGC 960
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GGAGTTCTGGGCGGAGGTGACCATCATCGCGCGGATGCACCACCTCAACCTGGTGCGGAT 1020
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GTGGGGGTTCTGCGCGGACAAGGAGCAGAGGATGCTGGTGTACGAGTATGTGCCAAACGG 1080
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      ATCGCTGGACAAGTACCTGTTCGCTCCAGGCACCGGCACCCAAGGAGACGAAGAAGAGAG 1140
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CAACAAGCGGCCTCTGCTTGACCTGCACACCCGCTACCGCATCGCTCTGGGCGTGGCGCG 1200
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGCCATCGCGTACCTTCACGAGGAGTGCCTCGAGTGGGTTCTGCACTGCGACATCAAGCC 1260
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      TGAGAACATCCTTCTGGAGGACGACTTCTGCCCCAAGGTGTCCGACTTCGGGCTGTCCAA 1320
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GCTCACCAGCAAGAAGGAGAAGGTGACCATGTCCCGCATCCGTGGCACCCGCGGGTACAT 1380
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      GGCCCCCGAGTGGGTCATCCACCGCGAGCCCATCACCGCCAAGGCCGACGTCTACAGCTT 1440
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGGCATGGTTCTGCTTGAGATCGTCTCCGGCCGCCGCAACTACGGCTTCCGCCAGGACTC 1500
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGTCGGCAGCGAGGACTGGTACTTCCCCAAGTGGGCCTTCGAGAAGGTCTACGTCGAGCG 1560
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CCGCATCGACGACATCATCGACCCTCGCATCGTCCAGGCCGAGGCCTACGACGACGACCC 1620
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      CGCCAGCCTCGCCACCGTCGAGCGCATGGTCAAGACGGCCATGTGGTGCCTTCAGGACCG 1680
consensus_11334#1      ----------------------------------------------------CAGGACCG 8
                                                                           ********

consensus_11334#0      C-GCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGA 1739
consensus_11334#1      CAGCCGACATGAGGCCCTCCATGGGCAAGGTCGCCAAGATGCTCGAGGGCACCGTCGAGA 68
                       * **********************************************************

consensus_11334#0      TCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAG 1799
consensus_11334#1      TCACCGAGCCCGTCAAGCCCACCATCTTCTGCGTCCAGGACGACTGATCTCTCCTAGGAG 128
                       ************************************************************

consensus_11334#0      TACTCCACTTCTTGCCACGAGAGACACACAAATTATCTTTCTTATTTATTATACTAGTAC 1859
consensus_11334#1      TACTCCACTTCTTGCCACGAGAGACACACAA-TTATCTTTCTTATTTATTATACTAGTAC 187
                       ******************************* ****************************

consensus_11334#0      TAGTTCAGATCAGATCAGAGCAGAGCACTGCATATCCTGCGTTGTCTGATTTGCCTGCTG 1919
consensus_11334#1      TAGTTCAGATCAGATCAGAGCAGACC-CTGCATATCCTGCGTTGTCTGATTTGCCT-CTG 245
                       ************************ * ***************************** ***

consensus_11334#0      GGCTCACGACAGCAACTGAGCAAGGCAAATGTACATGATGAGTGGATTACGCTTCAAAAT 1979
consensus_11334#1      GGCTCACGACAGCAACTGAGCAAG-CAAATGTACATGATGAGTGGATTACGCTTCAAA-T 303
                       ************************ ********************************* *

consensus_11334#0      GATACGCACCATCAAATTCGTCGGCATCTCTCTCGTAGGCTCAGCGCAGATATCATGACA 2039
consensus_11334#1      GATACGCACCATCAA-TTAAAAAAAA---------------------------------- 328
                       *************** **       *                                  

consensus_11334#0      TATATTTACCTTTTTTTTATTAGTAAATTTCATAAAACTACATATACTTTGACTAAATTA 2099
consensus_11334#1      ------------------------------------------------------------
                                                                                   

consensus_11334#0      TCATAAAACTACAT 2113
consensus_11334#1      --------------
                                     




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)